FFCP PHASE1:Mm9::chr9:120088982..120088991,+: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr9:120088982..120088991,+ to FFCP PHASE1:Mm9::chr9:120088982..120088991,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=503 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:120088982..120088991,+ | |||
|description=CAGE_peak_at_chr9:120088982..120088991,+ | |||
|id=chr9:120088982..120088991,+ | |||
|ontology_enrichment_celltype=CL:0002610!4.50e-08!3;CL:0002614!6.14e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,4.03e-30,3;CL:0002614,1.54e-29,3;CL:0000117,6.04e-16,23;CL:0000337,6.04e-16,23;CL:0000540,2.20e-11,33;CL:0000047,2.20e-11,33;CL:0000031,2.20e-11,33;CL:0000404,2.20e-11,33;CL:0000393,9.26e-10,39;CL:0000211,9.26e-10,39;CL:0002319,6.31e-09,43;CL:0000221,9.66e-09,44;CL:0000133,9.66e-09,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002616!7.13e-21!49;UBERON:0000955!2.05e-20!50;UBERON:0006238!2.05e-20!50;UBERON:0002298!2.77e-20!6;UBERON:0001049!1.36e-16!52;UBERON:0005068!1.36e-16!52;UBERON:0006241!1.36e-16!52;UBERON:0007135!1.36e-16!52;UBERON:0000033!9.25e-16!63;UBERON:0001017!2.65e-15!73;UBERON:0005743!2.65e-15!73;UBERON:0000073!7.79e-15!75;UBERON:0001016!7.79e-15!75;UBERON:0002950!5.82e-12!4;UBERON:0001891!5.82e-12!4;UBERON:0009616!5.82e-12!4;UBERON:0002346!1.34e-11!71;UBERON:0003075!1.34e-11!71;UBERON:0007284!1.34e-11!71;UBERON:0003080!3.52e-11!40;UBERON:0007811!5.94e-11!86;UBERON:0004121!2.71e-10!102;UBERON:0000924!2.71e-10!102;UBERON:0006601!2.71e-10!102;UBERON:0001896!2.96e-10!2;UBERON:0005290!2.96e-10!2;UBERON:0010096!2.96e-10!2;UBERON:0000153!7.94e-10!94;UBERON:0002780!2.38e-09!39;UBERON:0001890!2.38e-09!39;UBERON:0006240!2.38e-09!39;UBERON:0003056!7.32e-09!49;UBERON:0002021!2.38e-08!10;UBERON:0000411!2.38e-08!10;UBERON:0001950!2.38e-08!10;UBERON:0004684!4.50e-08!3;UBERON:0002275!4.50e-08!3;UBERON:0002791!5.98e-08!29;UBERON:0003528!5.98e-08!29;UBERON:0001893!5.98e-08!29;UBERON:0002038!6.14e-08!3;UBERON:0002308!6.14e-08!3;UBERON:0009663!6.14e-08!3;UBERON:0009661!6.14e-08!3;UBERON:0006331!6.14e-08!3;UBERON:0000125!6.14e-08!3;UBERON:0004733!1.22e-07!6;UBERON:0004732!1.22e-07!6;UBERON:0002028!1.22e-07!6;UBERON:0007277!1.22e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,4.03e-30,3;UBERON:0002275,4.03e-30,3;UBERON:0002038,1.54e-29,3;UBERON:0009663,1.54e-29,3;UBERON:0009661,1.54e-29,3;UBERON:0000125,1.54e-29,3;UBERON:0002308,1.54e-29,3;UBERON:0002950,1.79e-22,4;UBERON:0001891,1.79e-22,4;UBERON:0009616,1.79e-22,4;UBERON:0010286,1.79e-22,4;UBERON:0002420,8.09e-12,8;UBERON:0007245,8.09e-12,8;UBERON:0010009,8.09e-12,8;UBERON:0010011,8.09e-12,8;UBERON:0000454,8.09e-12,8;UBERON:0000073,2.91e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.042997409363,1.84327839907492,0,0,0,1.67509799400829,0,1.06958773443767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.149790639404823,0.457500602818626,0,0,0.255715457330331,0.20778804455956,0.486723789203273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.343706364687375,0,0.755393897389701,0.675022500231806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.042997409363,1.84327839907492,0,0,0,1.67509799400829,0,1.06958773443767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.149790639404823,0.457500602818626,0,0,0.255715457330331,0.20778804455956,0.486723789203273,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.343706364687375,0,0.755393897389701,0.675022500231806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr9:120088982..120088991,+ | |||
}} | }} |
Latest revision as of 18:00, 4 August 2015
Short description: | p@chr9:120088982..120088991, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:120088982..120088991, + |
Coexpression cluster: | MCL_coexpression_mm9:503 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 4.03e-30 | 3 |
neuron of the substantia nigra | 1.54e-29 | 3 |
CNS neuron (sensu Vertebrata) | 6.04e-16 | 23 |
neuroblast (sensu Vertebrata) | 6.04e-16 | 23 |
neuron | 2.20e-11 | 33 |
neuronal stem cell | 2.20e-11 | 33 |
neuroblast | 2.20e-11 | 33 |
electrically signaling cell | 2.20e-11 | 33 |
electrically responsive cell | 9.26e-10 | 39 |
electrically active cell | 9.26e-10 | 39 |
neural cell | 6.31e-09 | 43 |
ectodermal cell | 9.66e-09 | 44 |
neurectodermal cell | 9.66e-09 | 44 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 4.03e-30 | 3 |
reticular formation | 4.03e-30 | 3 |
substantia nigra | 1.54e-29 | 3 |
telencephalic nucleus | 1.54e-29 | 3 |
midbrain nucleus | 1.54e-29 | 3 |
neural nucleus | 1.54e-29 | 3 |
nucleus of brain | 1.54e-29 | 3 |
regional part of midbrain | 1.79e-22 | 4 |
midbrain | 1.79e-22 | 4 |
presumptive midbrain | 1.79e-22 | 4 |
midbrain neural tube | 1.79e-22 | 4 |
basal ganglion | 8.09e-12 | 8 |
nuclear complex of neuraxis | 8.09e-12 | 8 |
aggregate regional part of brain | 8.09e-12 | 8 |
collection of basal ganglia | 8.09e-12 | 8 |
cerebral subcortex | 8.09e-12 | 8 |
regional part of nervous system | 2.91e-07 | 54 |