FFCP PHASE1:Mm9::chr9:63605978..63605997,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr9:63605978..63605997,- to FFCP PHASE1:Mm9::chr9:63605978..63605997,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=17127 | |EntrezGene=17127 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-60bp_to_uc009qbj.1_5end | |||
|cluster_id=chr9:63605978..63605997,- | |||
|description=CAGE_peak_2_at_Smad3_5end | |||
|id=chr9:63605978..63605997,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000072!1.57e-09!27;UBERON:0002370!1.32e-08!23;UBERON:0000974!1.32e-08!23;UBERON:0004807!1.32e-08!23;UBERON:0005058!1.32e-08!23;UBERON:0003351!1.32e-08!23;UBERON:0009113!1.32e-08!23;UBERON:0003295!1.32e-08!23;UBERON:0009722!1.32e-08!23;UBERON:0005562!1.32e-08!23;UBERON:0007690!1.32e-08!23;UBERON:0006562!5.50e-08!24;UBERON:0001557!5.50e-08!24;UBERON:0001042!5.50e-08!24;UBERON:0008814!5.50e-08!24;UBERON:0009145!5.50e-08!24;UBERON:0000065!1.31e-07!41;UBERON:0003408!1.57e-07!24;UBERON:0001004!6.78e-07!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000072,1.31e-09,27;UBERON:0002370,1.11e-08,23;UBERON:0000974,1.11e-08,23;UBERON:0004807,1.11e-08,23;UBERON:0005058,1.11e-08,23;UBERON:0003351,1.11e-08,23;UBERON:0009113,1.11e-08,23;UBERON:0003295,1.11e-08,23;UBERON:0009722,1.11e-08,23;UBERON:0005562,1.11e-08,23;UBERON:0007690,1.11e-08,23;UBERON:0006562,4.65e-08,24;UBERON:0001557,4.65e-08,24;UBERON:0001042,4.65e-08,24;UBERON:0008814,4.65e-08,24;UBERON:0009145,4.65e-08,24;UBERON:0000065,1.15e-07,41;UBERON:0003408,1.28e-07,24;UBERON:0001004,5.82e-07,42 | |||
|phase1_expression=2.88267924788629,8.02643437570531,4.09499315450582,16.6355316218757,23.5420993074783,4.36486106970913,1.86890112476421,7.23090611272827,27.87616698603,16.6185813688615,9.93064215707929,6.54131703761759,5.30722262786738,6.29426897416781,2.99798785634096,0.809901069559304,0.699561878128147,4.41647031501533,1.50825876966313,4.66828616977833,3.99703463710028,2.87943758482567,1.04479915655574,1.11994695955385,3.89995777814189,6.89078356938024,1.7230479846363,3.66301095566011,4.18051522804023,4.78857246543868,1.10865255327652,1.90509202037889,7.38077745101484,0,3.75507105676657,2.99222361645286,2.85837098767317,8.37063261473815,0.7813353445238,5.75876118371178,11.1763982725893,11.6117732442936,4.85510353031154,1.1330713617802,2.83855407414641,6.05704282133549,2.34717403304412,1.09012578190223,1.31811709640683,3.30530828426282,2.09979632438044,1.43752564364972,9.06026072711776,11.6057942721815,8.73843877770406,5.91696702882678,0.85960031981627,4.64104883049698,1.01158230429799,1.5869729378161,1.90149421051854,2.37191172448392,2.66788438833342,2.6996991518442,1.97773272513395,4.2628806896766,2.09720077362883,2.30530983192933,2.59224030771194,2.02508907497536,1.68259969081106,2.57085885963423,1.32521124570968,2.69479758272899,3.35459148563827,1.83843757322004,3.30347642998166,2.55374676170375,1.84327839907492,0.791317726381163,2.10421580285542,2.08365348222704,0.558365998002762,1.12552522006336,2.90316670775939,3.24091444021034,3.84403538157578,3.91438836233131,3.48340489332647,2.19157524309678,7.8263411949453,3.44169550792555,2.03991400112325,2.15881276655127,0.649776417447669,0.448026887097336,1.40444420131752,2.21559419351475,1.29893002301434,4.24007489412408,2.11265129665021,6.41632387071589,2.54805239706646,0,6.71122227134764,8.10751569520315,9.0994400102661,1.1418387971906,2.58937883647172,3.71105347662062,1.73485326766136,0.913396434936424,0.922461989024234,0.904335843315735,0.823120949949934,1.50799909595611,2.96633961281249,1.87979163995885,1.76922110389975,2.58826959915855,1.54589062922275,1.45462575940567,5.59175283654366,2.04946557908083,2.72280718857492,3.32094171771169,4.67278985573089,2.99951365496704,2.1601938602421,1.19832511523858,9.60751265919116,4.77486538028885,3.65031072403781,3.58001640262463,1.87009240103604,2.43361894601636,2.24046600470696,2.11491850037158,3.0326731012041,1.26265113531884,6.11566081924707,2.98872735763515,6.48223667299257,2.26057226753573,2.99360596265843,1.92170580427275,2.62364828767241,1.03481348295606,8.40715172438085,8.69887968771969,9.32540958068929,4.82230611340665,3.33656699070717,3.83077383174383,2.05782136407943,7.16523360546575,0,1.54408744268829,0.568326998791185,4.34964122324554,3.04883877975425,3.06105504483725,4.7348947117042,1.96764231747404,2.1597395804233,2.79040733700489,0.536546802799238,2.21854150497622,2.30383789878873,0.985004784474571,1.29710095273369,1.46199987425332,0.878200461164203,1.34206418760372,5.46753866266731,1.3377599609307,6.93879444265976,2.11560453330835,2.98603550749328,2.09013004674395,4.12375876230699,4.63872106633688,4.22518283305254,4.75564065281398,4.74529061544512,2.30578536613615,3.51869292320377,2.78539060857611,4.28920991662064,8.08937467788799,2.16138049874694,4.18196673834171,4.93136542478012,3.19895835307241,4.50830942692322,2.03651327845314,4.46090720485539,4.9095073923223,4.55303067294652,2.95220295959204,2.04098346193787,2.34454611451421,2.07516838961004,2.33583148002532,2.35870794135844,3.14806957338795,1.62288097110802,2.17059443777175,0.763877555344259,2.01387296215567,1.13494658742525,0.549122826376163,0,0.744281895337007,4.05648975048929,1.26289438973556,1.25578189465339,0.964887042726734,2.40179147216586,4.73728529426212,3.42226450528254,2.20668611507745,3.52035372432753,3.1826188913945,2.85652369063216,4.48807390072937,1.57635144106191,1.7717175171902,3.18909537314974,1.96635977658886,4.31712454664739,2.89298117163023,1.50791283939272,0.54390568381871,4.42587845717133,3.86311444826625,1.28440471990234,0.937693492737625,0.983609672260053,1.76729649043061,5.67914794949262,3.51394869866975,4.95473814785438,5.73525115086125,2.89638276307112,3.67999490025482,5.66734982344852,3.50707029493574,3.16230222357219,5.78378369559253,3.97432238583152,4.45164009168138,2.93196526836437,1.64970122972535,3.98235415019888,2.91336763385978,5.74414758233027,2.64047111658257,5.31543407185391,4.61152721915891,2.32585463851399,2.90826983582004,6.06045543254026,3.79244109522979,0,2.06271086496374,7.48967132658334,5.76195500900193,4.2688365648309,3.64372959553707,3.01478397191865,1.42695054081656,3.78462747384878,4.26250928760439,0.704015124191131,2.75381692122966,0.441056796109924,2.30840754118072,2.26050197374268,2.35220407219808,1.79058516004705,1.80554989719567,2.62332752966866,0.927126510052548,1.87957968877638,4.54051109519089,1.66675074632741,1.88368457004691,2.05041341581538,1.60144721244566,9.68877050964975,9.23679585336143,9.95039811391851,0.954670618015114,5.06137589729817,2.64315307264903,2.48412283890143,2.9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| |phase1_expression=2.88267924788629,8.02643437570531,4.09499315450582,16.6355316218757,23.5420993074783,4.36486106970913,1.86890112476421,7.23090611272827,27.87616698603,16.6185813688615,9.93064215707929,6.54131703761759,5.30722262786738,6.29426897416781,2.99798785634096,0.809901069559304,0.699561878128147,4.41647031501533,1.50825876966313,4.66828616977833,3.99703463710028,2.87943758482567,1.04479915655574,1.11994695955385,3.89995777814189,6.89078356938024,1.7230479846363,3.66301095566011,4.18051522804023,4.78857246543868,1.10865255327652,1.90509202037889,7.38077745101484,0,3.75507105676657,2.99222361645286,2.85837098767317,8.37063261473815,0.7813353445238,5.75876118371178,11.1763982725893,11.6117732442936,4.85510353031154,1.1330713617802,2.83855407414641,6.05704282133549,2.34717403304412,1.09012578190223,1.31811709640683,3.30530828426282,2.09979632438044,1.43752564364972,9.06026072711776,11.6057942721815,8.73843877770406,5.91696702882678,0.85960031981627,4.64104883049698,1.01158230429799,1.5869729378161,1.90149421051854,2.37191172448392,2.66788438833342,2.6996991518442,1.97773272513395,4.2628806896766,2.09720077362883,2.30530983192933,2.59224030771194,2.02508907497536,1.68259969081106,2.57085885963423,1.32521124570968,2.69479758272899,3.35459148563827,1.83843757322004,3.30347642998166,2.55374676170375,1.84327839907492,0.791317726381163,2.10421580285542,2.08365348222704,0.558365998002762,1.12552522006336,2.90316670775939,3.24091444021034,3.84403538157578,3.91438836233131,3.48340489332647,2.19157524309678,7.8263411949453,3.44169550792555,2.03991400112325,2.15881276655127,0.649776417447669,0.448026887097336,1.40444420131752,2.21559419351475,1.29893002301434,4.24007489412408,2.11265129665021,6.41632387071589,2.54805239706646,0,6.71122227134764,8.10751569520315,9.0994400102661,1.1418387971906,2.58937883647172,3.71105347662062,1.73485326766136,0.913396434936424,0.922461989024234,0.904335843315735,0.823120949949934,1.50799909595611,2.96633961281249,1.87979163995885,1.76922110389975,2.58826959915855,1.54589062922275,1.45462575940567,5.59175283654366,2.04946557908083,2.72280718857492,3.32094171771169,4.67278985573089,2.99951365496704,2.1601938602421,1.19832511523858,9.60751265919116,4.77486538028885,3.65031072403781,3.58001640262463,1.87009240103604,2.43361894601636,2.24046600470696,2.11491850037158,3.0326731012041,1.26265113531884,6.11566081924707,2.98872735763515,6.48223667299257,2.26057226753573,2.99360596265843,1.92170580427275,2.62364828767241,1.03481348295606,8.40715172438085,8.69887968771969,9.32540958068929,4.82230611340665,3.33656699070717,3.83077383174383,2.05782136407943,7.16523360546575,0,1.54408744268829,0.568326998791185,4.34964122324554,3.04883877975425,3.06105504483725,4.7348947117042,1.96764231747404,2.1597395804233,2.79040733700489,0.536546802799238,2.21854150497622,2.30383789878873,0.985004784474571,1.29710095273369,1.46199987425332,0.878200461164203,1.34206418760372,5.46753866266731,1.3377599609307,6.93879444265976,2.11560453330835,2.98603550749328,2.09013004674395,4.12375876230699,4.63872106633688,4.22518283305254,4.75564065281398,4.74529061544512,2.30578536613615,3.51869292320377,2.78539060857611,4.28920991662064,8.08937467788799,2.16138049874694,4.18196673834171,4.93136542478012,3.19895835307241,4.50830942692322,2.03651327845314,4.46090720485539,4.9095073923223,4.55303067294652,2.95220295959204,2.04098346193787,2.34454611451421,2.07516838961004,2.33583148002532,2.35870794135844,3.14806957338795,1.62288097110802,2.17059443777175,0.763877555344259,2.01387296215567,1.13494658742525,0.549122826376163,0,0.744281895337007,4.05648975048929,1.26289438973556,1.25578189465339,0.964887042726734,2.40179147216586,4.73728529426212,3.42226450528254,2.20668611507745,3.52035372432753,3.1826188913945,2.85652369063216,4.48807390072937,1.57635144106191,1.7717175171902,3.18909537314974,1.96635977658886,4.31712454664739,2.89298117163023,1.50791283939272,0.54390568381871,4.42587845717133,3.86311444826625,1.28440471990234,0.937693492737625,0.983609672260053,1.76729649043061,5.67914794949262,3.51394869866975,4.95473814785438,5.73525115086125,2.89638276307112,3.67999490025482,5.66734982344852,3.50707029493574,3.16230222357219,5.78378369559253,3.97432238583152,4.45164009168138,2.93196526836437,1.64970122972535,3.98235415019888,2.91336763385978,5.74414758233027,2.64047111658257,5.31543407185391,4.61152721915891,2.32585463851399,2.90826983582004,6.06045543254026,3.79244109522979,0,2.06271086496374,7.48967132658334,5.76195500900193,4.2688365648309,3.64372959553707,3.01478397191865,1.42695054081656,3.78462747384878,4.26250928760439,0.704015124191131,2.75381692122966,0.441056796109924,2.30840754118072,2.26050197374268,2.35220407219808,1.79058516004705,1.80554989719567,2.62332752966866,0.927126510052548,1.87957968877638,4.54051109519089,1.66675074632741,1.88368457004691,2.05041341581538,1.60144721244566,9.68877050964975,9.23679585336143,9.95039811391851,0.954670618015114,5.06137589729817,2.64315307264903,2.48412283890143,2.9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| ||
|short_description=p2@Smad3 | |||
}} | }} |
Latest revision as of 23:44, 26 September 2015
Short description: | p2@Smad3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Smad3_5end |
Coexpression cluster: | NA |
Association with transcript: | -60bp_to_uc009qbj.1_5end |
EntrezGene: | Smad3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
segment of respiratory tract | 1.31e-09 | 27 |
thymus | 1.11e-08 | 23 |
neck | 1.11e-08 | 23 |
respiratory system epithelium | 1.11e-08 | 23 |
hemolymphoid system gland | 1.11e-08 | 23 |
pharyngeal epithelium | 1.11e-08 | 23 |
thymic region | 1.11e-08 | 23 |
pharyngeal gland | 1.11e-08 | 23 |
entire pharyngeal arch endoderm | 1.11e-08 | 23 |
thymus primordium | 1.11e-08 | 23 |
early pharyngeal endoderm | 1.11e-08 | 23 |
pharynx | 4.65e-08 | 24 |
upper respiratory tract | 4.65e-08 | 24 |
chordate pharynx | 4.65e-08 | 24 |
pharyngeal arch system | 4.65e-08 | 24 |
pharyngeal region of foregut | 4.65e-08 | 24 |
respiratory tract | 1.15e-07 | 41 |
gland of gut | 1.28e-07 | 24 |
respiratory system | 5.82e-07 | 42 |