FFCP PHASE1:Mm9::chr9:64021171..64021195,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr9:64021171..64021195,+ to FFCP PHASE1:Mm9::chr9:64021171..64021195,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=67891 | |EntrezGene=67891 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=672 | |||
|TSSclassifier=NA | |||
|UniProt=Q9D8E6,Q564E8 | |UniProt=Q9D8E6,Q564E8 | ||
|association_with_transcript=0bp_to_ENSMUST00000034966,NM_024212,uc009qbn.1_5end | |||
|cluster_id=chr9:64021171..64021195,+ | |||
|description=CAGE_peak_1_at_Rpl4_5end | |||
|id=chr9:64021171..64021195,+ | |||
|ontology_enrichment_celltype=CL:0000988!3.05e-10!32;CL:0002032!3.05e-10!32;CL:0000037!3.05e-10!32;CL:0000566!3.05e-10!32;CL:0000837!3.05e-10!32;CL:0000542!5.27e-09!13;CL:0000051!5.27e-09!13;CL:0000838!7.32e-09!12;CL:0000084!3.12e-08!11;CL:0000827!3.12e-08!11;CL:0000791!3.87e-07!9;CL:0000789!3.87e-07!9;CL:0002420!3.87e-07!9;CL:0002419!3.87e-07!9;CL:0000790!3.87e-07!9;CL:0000063!5.10e-07!66;CL:0002031!9.60e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.05e-10,32;CL:0002032,3.05e-10,32;CL:0000037,3.05e-10,32;CL:0000837,3.05e-10,32;CL:0000542,5.27e-09,13;CL:0000051,5.27e-09,13;CL:0000838,7.32e-09,12;CL:0000084,3.12e-08,11;CL:0000827,3.12e-08,11;CL:0000791,3.87e-07,9;CL:0000789,3.87e-07,9;CL:0002420,3.87e-07,9;CL:0002419,3.87e-07,9;CL:0000790,3.87e-07,9;CL:0002031,9.60e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!3.52e-08!128;UBERON:0001555!3.52e-08!128;UBERON:0007026!3.52e-08!128;UBERON:0004119!5.34e-08!130;UBERON:0000925!5.34e-08!130;UBERON:0006595!5.34e-08!130;UBERON:0000926!7.26e-08!193;UBERON:0004120!7.26e-08!193;UBERON:0006603!7.26e-08!193;UBERON:0000077!1.20e-07!97;UBERON:0004921!1.62e-07!126;UBERON:0004185!1.62e-07!126;UBERON:0001041!5.34e-07!92 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=334.230643907705,251.611268907979,187.004687389099,163.028209894381,170.304548181758,312.926962843763,632.623030732684,1046.41541317053,3352.88341804194,2311.85532648233,2171.55749100408,1197.300334361,2093.95612778858,1466.04014856659,424.381836553154,1157.34862840025,816.388711775547,1902.86778144089,1645.23608883526,1190.41297329347,196.450000248971,764.738906149219,1846.94370900141,744.924720526102,701.99240006554,400.239678988169,667.250332050407,867.056240328017,501.281780525914,632.847655827186,443.239290799954,160.027729711827,108.866467402469,301.115193929334,1149.62944661007,2107.85530314568,1487.37376037136,201.73224601519,333.630192111663,313.590722640305,131.175621830916,144.80564281119,151.964740498751,433.840434743839,448.592920646352,495.57623083654,63.3736988921912,56.0324651897748,63.7089929929968,71.5502028593363,175.822945561455,73.3138078261355,1854.66892736222,1266.48229995181,1936.90856445802,379.972187025094,389.112411436832,226.895720602075,99.3373822820625,79.877637870077,79.8627568417786,156.20732928387,143.176462173893,44.0950861467885,76.142709917657,58.2593694255802,39.8468146989478,38.0376122268339,174.405927902859,193.598515567644,217.265685075978,81.9818325238916,103.587345706307,217.666150204973,165.812664861549,165.459381589804,267.581590828515,141.222195922218,154.98899205555,101.288668976789,134.944274313554,138.562956568098,117.25685958058,255.494224954383,146.991914361291,244.247097357671,186.364530166026,191.99142920006,1242.81828498422,840.053462147028,398.273807476105,516.254326188832,329.786096848259,333.536572432171,229.371075359027,198.923937871217,319.370611379604,514.358713540578,691.030772243631,699.965697104984,708.16071463715,451.709200498399,142.690934235722,63.9960032837998,559.196358931966,585.768008978428,541.416680610833,250.405248223899,518.134705177991,294.806088182742,332.918342064215,349.83083458065,308.563535328606,302.048171667456,319.135751166303,192.646884508393,385.129759730154,221.815413515144,321.998240909754,331.783809242136,280.027045407779,289.955401374863,186.391761218122,118.576222789677,96.9738252546297,352.530736187856,1861.56758944848,1791.90945747731,2383.3291789824,220.941193122113,235.155309848774,288.376738099024,201.462387102848,160.077876288787,210.073713049715,159.483161595606,442.797554021175,362.770726299031,584.295017498656,293.355947105745,442.019144744305,366.693856571389,432.689297922254,308.191352474037,239.692586510128,224.583351659342,211.297388882188,212.136764005993,434.153937766744,380.481433297652,402.752123211279,492.971202229616,436.534181284189,496.259337294087,499.639027198487,329.600745851425,979.587396301962,1854.96371448287,836.009015221834,427.921846058347,430.824372185274,379.75088762128,404.360008379539,344.337405557957,338.770579900683,290.434896993259,275.248509836009,267.976460732654,236.966183875412,248.385373151671,196.916138386884,225.294180622437,217.574164253431,190.573114639728,191.784433090484,273.108841254621,134.81086345739,288.251117663263,469.44743942805,380.635905179259,440.082380414949,432.812843841693,423.852551568323,398.142235453586,278.074030065084,353.608655792451,304.366937857126,394.530684057602,316.426713394332,241.782420927986,290.489539031589,325.59598177089,332.108494568846,376.905843099495,401.239538996166,346.207257337034,355.902813952593,309.579508995866,198.942145792913,213.887104422444,200.801372909118,212.366519109419,277.183206326484,504.706444791184,520.684778054875,522.12982495763,473.272663199377,481.389610865824,465.456057056435,470.095488594625,553.205393756421,416.235102393132,300.475551642171,358.743873552437,316.09416286505,240.960249561545,290.265015078454,324.684489877546,291.910040463235,415.365174600903,439.679506440586,381.417207736848,453.890940189963,467.844977034991,474.420976285825,277.675180901648,267.033934115888,310.050565508285,208.566837403993,250.710871515079,217.92844711476,243.589014651266,490.071672802635,505.8322859514,423.900803342409,535.593224577486,202.935945744569,164.330784602269,1002.13432108762,320.890548476758,302.57238242019,313.522311670201,282.635497825432,310.420468540365,306.12537818921,214.288933807146,335.588071688487,315.344070686306,319.787812358738,203.396393295004,369.611981882331,308.231559948019,422.365885603823,377.781581607106,937.180676680138,455.6992540629,378.206769762904,704.439972888279,397.181045924639,570.599634583929,338.282635757201,517.672030775968,531.894088550004,558.436951272587,637.782581878743,620.875970354085,410.229724933315,350.759011172992,275.275279089702,331.15071912381,347.941538406141,345.857137330415,319.554198009319,234.742475767356,363.506475790687,256.528637816086,561.465301447933,298.938776582903,499.570936197132,373.397318230213,448.004407043771,436.286511522373,311.010052684051,211.755694896002,401.88831163655,358.700376520081,466.319819916934,431.740503454752,469.134589538558,385.491221852991,1537.79485615441,1410.8505908748,1865.42324641211,525.068839908312,440.1815350681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|phase1_expression=334.230643907705,251.611268907979,187.004687389099,163.028209894381,170.304548181758,312.926962843763,632.623030732684,1046.41541317053,3352.88341804194,2311.85532648233,2171.55749100408,1197.300334361,2093.95612778858,1466.04014856659,424.381836553154,1157.34862840025,816.388711775547,1902.86778144089,1645.23608883526,1190.41297329347,196.450000248971,764.738906149219,1846.94370900141,744.924720526102,701.99240006554,400.239678988169,667.250332050407,867.056240328017,501.281780525914,632.847655827186,443.239290799954,160.027729711827,108.866467402469,301.115193929334,1149.62944661007,2107.85530314568,1487.37376037136,201.73224601519,333.630192111663,313.590722640305,131.175621830916,144.80564281119,151.964740498751,433.840434743839,448.592920646352,495.57623083654,63.3736988921912,56.0324651897748,63.7089929929968,71.5502028593363,175.822945561455,73.3138078261355,1854.66892736222,1266.48229995181,1936.90856445802,379.972187025094,389.112411436832,226.895720602075,99.3373822820625,79.877637870077,79.8627568417786,156.20732928387,143.176462173893,44.0950861467885,76.142709917657,58.2593694255802,39.8468146989478,38.0376122268339,174.405927902859,193.598515567644,217.265685075978,81.9818325238916,103.587345706307,217.666150204973,165.812664861549,165.459381589804,267.581590828515,141.222195922218,154.98899205555,101.288668976789,134.944274313554,138.562956568098,117.25685958058,255.494224954383,146.991914361291,244.247097357671,186.364530166026,191.99142920006,1242.81828498422,840.053462147028,398.273807476105,516.254326188832,329.786096848259,333.536572432171,229.371075359027,198.923937871217,319.370611379604,514.358713540578,691.030772243631,699.965697104984,708.16071463715,451.709200498399,142.690934235722,63.9960032837998,559.196358931966,585.768008978428,541.416680610833,250.405248223899,518.134705177991,294.806088182742,332.918342064215,349.83083458065,308.563535328606,302.048171667456,319.135751166303,192.646884508393,385.129759730154,221.815413515144,321.998240909754,331.783809242136,280.027045407779,289.955401374863,186.391761218122,118.576222789677,96.9738252546297,352.530736187856,1861.56758944848,1791.90945747731,2383.3291789824,220.941193122113,235.155309848774,288.376738099024,201.462387102848,160.077876288787,210.073713049715,159.483161595606,442.797554021175,362.770726299031,584.295017498656,293.355947105745,442.019144744305,366.693856571389,432.689297922254,308.191352474037,239.692586510128,224.583351659342,211.297388882188,212.136764005993,434.153937766744,380.481433297652,402.752123211279,492.971202229616,436.534181284189,496.259337294087,499.639027198487,329.600745851425,979.587396301962,1854.96371448287,836.009015221834,427.921846058347,430.824372185274,379.75088762128,404.360008379539,344.337405557957,338.770579900683,290.434896993259,275.248509836009,267.976460732654,236.966183875412,248.385373151671,196.916138386884,225.294180622437,217.574164253431,190.573114639728,191.784433090484,273.108841254621,134.81086345739,288.251117663263,469.44743942805,380.635905179259,440.082380414949,432.812843841693,423.852551568323,398.142235453586,278.074030065084,353.608655792451,304.366937857126,394.530684057602,316.426713394332,241.782420927986,290.489539031589,325.59598177089,332.108494568846,376.905843099495,401.239538996166,346.207257337034,355.902813952593,309.579508995866,198.942145792913,213.887104422444,200.801372909118,212.366519109419,277.183206326484,504.706444791184,520.684778054875,522.12982495763,473.272663199377,481.389610865824,465.456057056435,470.095488594625,553.205393756421,416.235102393132,300.475551642171,358.743873552437,316.09416286505,240.960249561545,290.265015078454,324.684489877546,291.910040463235,415.365174600903,439.679506440586,381.417207736848,453.890940189963,467.844977034991,474.420976285825,277.675180901648,267.033934115888,310.050565508285,208.566837403993,250.710871515079,217.92844711476,243.589014651266,490.071672802635,505.8322859514,423.900803342409,535.593224577486,202.935945744569,164.330784602269,1002.13432108762,320.890548476758,302.57238242019,313.522311670201,282.635497825432,310.420468540365,306.12537818921,214.288933807146,335.588071688487,315.344070686306,319.787812358738,203.396393295004,369.611981882331,308.231559948019,422.365885603823,377.781581607106,937.180676680138,455.6992540629,378.206769762904,704.439972888279,397.181045924639,570.599634583929,338.282635757201,517.672030775968,531.894088550004,558.436951272587,637.782581878743,620.875970354085,410.229724933315,350.759011172992,275.275279089702,331.15071912381,347.941538406141,345.857137330415,319.554198009319,234.742475767356,363.506475790687,256.528637816086,561.465301447933,298.938776582903,499.570936197132,373.397318230213,448.004407043771,436.286511522373,311.010052684051,211.755694896002,401.88831163655,358.700376520081,466.319819916934,431.740503454752,469.134589538558,385.491221852991,1537.79485615441,1410.8505908748,1865.42324641211,525.068839908312,440.1815350681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| ||
|short_description=p1@Rpl4 | |||
}} | }} |
Latest revision as of 23:53, 26 September 2015
Short description: | p1@Rpl4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rpl4_5end |
Coexpression cluster: | MCL_coexpression_mm9:672 |
Association with transcript: | 0bp_to_ENSMUST00000034966, NM_024212, uc009qbn.1_5end |
EntrezGene: | Rpl4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.05e-10 | 32 |
hematopoietic oligopotent progenitor cell | 3.05e-10 | 32 |
hematopoietic stem cell | 3.05e-10 | 32 |
hematopoietic multipotent progenitor cell | 3.05e-10 | 32 |
lymphocyte | 5.27e-09 | 13 |
common lymphoid progenitor | 5.27e-09 | 13 |
lymphoid lineage restricted progenitor cell | 7.32e-09 | 12 |
T cell | 3.12e-08 | 11 |
pro-T cell | 3.12e-08 | 11 |
mature alpha-beta T cell | 3.87e-07 | 9 |
alpha-beta T cell | 3.87e-07 | 9 |
immature T cell | 3.87e-07 | 9 |
mature T cell | 3.87e-07 | 9 |
immature alpha-beta T cell | 3.87e-07 | 9 |
hematopoietic lineage restricted progenitor cell | 9.60e-07 | 25 |