FFCP PHASE1:Mm9::chr11:70568658..70568675,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=474 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-5bp_to_ENSMUST00000127333,uc007jwn.1_5end | |association_with_transcript=-5bp_to_ENSMUST00000127333,uc007jwn.1_5end | ||
|cluster_id=chr11:70568658..70568675,- | |||
|description=CAGE_peak_1_at_ENSMUST00000127333_5end,CAGE_peak_1_at_uc007jwn.1_5end | |description=CAGE_peak_1_at_ENSMUST00000127333_5end,CAGE_peak_1_at_uc007jwn.1_5end | ||
|id=chr11:70568658..70568675,- | |id=chr11:70568658..70568675,- | ||
|ontology_enrichment_celltype=CL:0002563!2.08e-11!9;CL:0002251!2.08e-11!9;CL:0000066!3.24e-09!25;CL:0002076!1.40e-08!15;CL:0000239!1.53e-07!6;CL:0000677!1.53e-07!6;CL:0000212!1.53e-07!6;CL:0000584!1.53e-07!6;CL:0000223!9.27e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.61e-18,9;CL:0002251,3.61e-18,9;CL:0002076,7.73e-13,15;CL:0000066,1.14e-12,25;CL:0000239,2.23e-10,6;CL:0000677,2.23e-10,6;CL:0000584,2.23e-10,6;CL:0002250,9.40e-10,3;CL:0000223,3.23e-09,20;CL:0000075,7.48e-09,7;CL:0000682,3.84e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.84e-19!59;UBERON:0000160!4.06e-19!43;UBERON:0000344!8.38e-18!15;UBERON:0001242!1.12e-15!13;UBERON:0000060!1.12e-15!13;UBERON:0001262!1.12e-15!13;UBERON:0004786!1.12e-15!13;UBERON:0001007!4.17e-12!128;UBERON:0001555!4.17e-12!128;UBERON:0007026!4.17e-12!128;UBERON:0004119!1.09e-11!130;UBERON:0000925!1.09e-11!130;UBERON:0006595!1.09e-11!130;UBERON:0003350!2.08e-11!9;UBERON:0004808!2.08e-11!9;UBERON:0001277!2.08e-11!9;UBERON:0004921!7.67e-11!126;UBERON:0004185!7.67e-11!126;UBERON:0000485!1.82e-10!11;UBERON:0004923!2.91e-09!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.86e-48,31;UBERON:0005409,9.90e-36,47;UBERON:0000344,1.29e-27,15;UBERON:0001242,3.12e-23,13;UBERON:0001262,3.12e-23,13;UBERON:0004786,3.12e-23,13;UBERON:0003350,3.61e-18,9;UBERON:0004808,3.61e-18,9;UBERON:0001277,3.61e-18,9;UBERON:0004923,3.54e-16,24;UBERON:0000485,1.29e-14,11;UBERON:0001007,2.03e-14,116;UBERON:0001555,2.03e-14,116;UBERON:0007026,2.03e-14,116;UBERON:0004119,4.55e-14,118;UBERON:0000925,4.55e-14,118;UBERON:0006595,4.55e-14,118;UBERON:0004921,2.41e-12,114;UBERON:0002108,3.62e-11,4;UBERON:0000331,8.81e-09,3;UBERON:0002116,8.81e-09,3;UBERON:0001204,8.81e-09,3;UBERON:0001168,8.81e-09,3 | |||
|phase1_expression=0.160148847104794,1.39590163055744,1.36499771816861,0.30246421130683,1.00179145989269,3.02182689441402,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91990907352088,1.60586496747019,1.72269589234506,1.7230479846363,1.939241094173,2.66032787238923,2.01624103807945,1.99557459589774,0,0,0,10.1098066912946,8.14549762256613,9.18762103180661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.441737081903227,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,1.01343946190039,0,0.22836775943812,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,2.3800550999719,0,0,1.28867461322093,2.21851877085677,1.33426826306922,1.52180500890047,0.949058123089023,1.31759163779209,2.5133520880027,1.98956472041151,1.16978452271472,3.59527763461689,1.51296634912286,2.78797782556114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96705709207614,3.03530420935206,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33184669303881,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0.203319467126849,0.324016022465404,0,0,0.269728692769641,0.578574190077352,0.26175594198403,2.33306951925227,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.205421914329655,0.25984164595559,0,0,0,0.295379054349154,0.100966449948148,0,0,0,0.192423683280659,0.116876902181569,0.680191150845634,0,0,0,0.19318959403219,0,0.183151624267265,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0,0.187283014939765,0.128050304809739,0.0574354689556133,0,0,0.192909220463705,0,0.294397840268795,0,0.532427418478012,0.476872379894642,0,0,0.0846146078916765,0,0,0.135804113845862,0,0,0.197008964751127,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0 | |phase1_expression=0.160148847104794,1.39590163055744,1.36499771816861,0.30246421130683,1.00179145989269,3.02182689441402,2.33612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91990907352088,1.60586496747019,1.72269589234506,1.7230479846363,1.939241094173,2.66032787238923,2.01624103807945,1.99557459589774,0,0,0,10.1098066912946,8.14549762256613,9.18762103180661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.441737081903227,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,1.01343946190039,0,0.22836775943812,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330418782983798,2.3800550999719,0,0,1.28867461322093,2.21851877085677,1.33426826306922,1.52180500890047,0.949058123089023,1.31759163779209,2.5133520880027,1.98956472041151,1.16978452271472,3.59527763461689,1.51296634912286,2.78797782556114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96705709207614,3.03530420935206,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33184669303881,0,0,0,0,0,0,0,0,0,0,1.90934123603023,0,0.203319467126849,0.324016022465404,0,0,0.269728692769641,0.578574190077352,0.26175594198403,2.33306951925227,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.205421914329655,0.25984164595559,0,0,0,0.295379054349154,0.100966449948148,0,0,0,0.192423683280659,0.116876902181569,0.680191150845634,0,0,0,0.19318959403219,0,0.183151624267265,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0,0.187283014939765,0.128050304809739,0.0574354689556133,0,0,0.192909220463705,0,0.294397840268795,0,0.532427418478012,0.476872379894642,0,0,0.0846146078916765,0,0,0.135804113845862,0,0,0.197008964751127,0,0,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0 | ||
|short_description=p1@ENSMUST00000127333,p1@uc007jwn.1 | |short_description=p1@ENSMUST00000127333,p1@uc007jwn.1 | ||
}} | }} |
Latest revision as of 21:50, 3 August 2015
Short description: | p1@ENSMUST00000127333, p1@uc007jwn.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000127333_5end, CAGE_peak_1_at_uc007jwn.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:474 |
Association with transcript: | -5bp_to_ENSMUST00000127333, uc007jwn.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.61e-18 | 9 |
epithelial cell of alimentary canal | 3.61e-18 | 9 |
endo-epithelial cell | 7.73e-13 | 15 |
epithelial cell | 1.14e-12 | 25 |
brush border epithelial cell | 2.23e-10 | 6 |
gut absorptive cell | 2.23e-10 | 6 |
enterocyte | 2.23e-10 | 6 |
intestinal crypt stem cell | 9.40e-10 | 3 |
endodermal cell | 3.23e-09 | 20 |
columnar/cuboidal epithelial cell | 7.48e-09 | 7 |
M cell of gut | 3.84e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.86e-48 | 31 |
gastrointestinal system | 9.90e-36 | 47 |
mucosa | 1.29e-27 | 15 |
intestinal mucosa | 3.12e-23 | 13 |
wall of intestine | 3.12e-23 | 13 |
gastrointestinal system mucosa | 3.12e-23 | 13 |
epithelium of mucosa | 3.61e-18 | 9 |
gastrointestinal system epithelium | 3.61e-18 | 9 |
intestinal epithelium | 3.61e-18 | 9 |
organ component layer | 3.54e-16 | 24 |
simple columnar epithelium | 1.29e-14 | 11 |
digestive system | 2.03e-14 | 116 |
digestive tract | 2.03e-14 | 116 |
primitive gut | 2.03e-14 | 116 |
endoderm-derived structure | 4.55e-14 | 118 |
endoderm | 4.55e-14 | 118 |
presumptive endoderm | 4.55e-14 | 118 |
subdivision of digestive tract | 2.41e-12 | 114 |
small intestine | 3.62e-11 | 4 |
ileal mucosa | 8.81e-09 | 3 |
ileum | 8.81e-09 | 3 |
mucosa of small intestine | 8.81e-09 | 3 |
wall of small intestine | 8.81e-09 | 3 |