FFCP PHASE1:Hg19::chr10:103040652..103040655,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000492301_5end | |association_with_transcript=0bp_to_ENST00000492301_5end | ||
|cluster_id=chr10:103040652..103040655,+ | |||
|description=CAGE_peak_1_at_ENST00000492301_5end | |description=CAGE_peak_1_at_ENST00000492301_5end | ||
|id=chr10:103040652..103040655,+ | |id=chr10:103040652..103040655,+ | ||
|ontology_enrichment_celltype=CL:0000540!1.13e-12!6;CL:0000031!1.13e-12!6;CL:0000404!1.13e-12!6;CL:0000047!1.62e-09!8;CL:0002319!3.71e-09!25 | |ontology_enrichment_celltype=CL:0000540!1.13e-12!6;CL:0000031!1.13e-12!6;CL:0000404!1.13e-12!6;CL:0000047!1.62e-09!8;CL:0002319!3.71e-09!25 | ||
|ontology_enrichment_celltype_v019=CL:0002591;3.99e-50;1!CL:0000540;7.07e-34;6!CL:0000404;7.07e-34;6!CL:0000307;9.45e-18;3!CL:0002319;2.06e-08;25!CL:0002202;8.37e-07;9!CL:0002632;8.37e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,3.99e-50,1;CL:0000540,5.98e-34,6;CL:0000031,5.98e-34,6;CL:0000404,5.98e-34,6;CL:0000047,8.65e-26,8;CL:0000068,1.12e-17,3;CL:0000069,1.12e-17,3;CL:0000307,1.12e-17,3;CL:0000377,1.12e-17,3;CL:0002319,1.98e-08,25;CL:0000393,3.25e-08,61;CL:0000211,3.25e-08,61;CL:0002202,8.85e-07,9;CL:0002632,8.85e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000031;7.07e-34;6!CL:0000377;9.45e-18;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000078;7.14e-26;2!UBERON:0002012;7.14e-26;2!UBERON:0008886;7.14e-26;2!UBERON:0003126;2.18e-08;7!UBERON:0001005;2.18e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000078,7.14e-26,2;UBERON:0007497,7.14e-26,2;UBERON:0003643,7.14e-26,2;UBERON:0003504,7.14e-26,2;UBERON:0003469,7.14e-26,2;UBERON:0003496,7.14e-26,2;UBERON:0002012,7.14e-26,2;UBERON:0008886,7.14e-26,2;UBERON:0007303,7.14e-26,2;UBERON:0002061,7.14e-26,2;UBERON:0005432,7.14e-26,2;UBERON:0004363,7.14e-26,2;UBERON:0004145,9.46e-18,3;UBERON:0003498,3.26e-11,5;UBERON:0005985,3.26e-11,5;UBERON:0010188,1.44e-09,6;UBERON:0002539,1.44e-09,6;UBERON:0003351,1.44e-09,6;UBERON:0008816,1.44e-09,6;UBERON:0003126,2.35e-08,7;UBERON:0001005,2.35e-08,7;UBERON:0000485,8.37e-07,9 | |||
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| ||
|short_description=p1@ENST00000492301 | |short_description=p1@ENST00000492301 | ||
}} | }} |
Latest revision as of 09:38, 23 July 2015
Short description: | p1@ENST00000492301 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000492301_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000492301_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 3.99e-50 | 1 |
neuron | 5.98e-34 | 6 |
neuroblast | 5.98e-34 | 6 |
electrically signaling cell | 5.98e-34 | 6 |
neuronal stem cell | 8.65e-26 | 8 |
duct epithelial cell | 1.12e-17 | 3 |
branched duct epithelial cell | 1.12e-17 | 3 |
tracheal epithelial cell | 1.12e-17 | 3 |
tracheoblast | 1.12e-17 | 3 |
neural cell | 1.98e-08 | 25 |
electrically responsive cell | 3.25e-08 | 61 |
electrically active cell | 3.25e-08 | 61 |
epithelial cell of tracheobronchial tree | 8.85e-07 | 9 |
epithelial cell of lower respiratory tract | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
mixed ectoderm/mesoderm/endoderm-derived structure | 7.14e-26 | 2 |
developing epithelial placode | 7.14e-26 | 2 |
respiratory system arterial blood vessel | 7.14e-26 | 2 |
respiratory system blood vessel | 7.14e-26 | 2 |
respiratory system artery | 7.14e-26 | 2 |
head blood vessel | 7.14e-26 | 2 |
pulmonary artery | 7.14e-26 | 2 |
pulmonary vascular system | 7.14e-26 | 2 |
pharyngeal vasculature | 7.14e-26 | 2 |
truncus arteriosus | 7.14e-26 | 2 |
aortic sac | 7.14e-26 | 2 |
pharyngeal arch artery | 7.14e-26 | 2 |
outflow tract | 9.46e-18 | 3 |
heart blood vessel | 3.26e-11 | 5 |
coronary vessel | 3.26e-11 | 5 |
protuberance | 1.44e-09 | 6 |
pharyngeal arch | 1.44e-09 | 6 |
pharyngeal epithelium | 1.44e-09 | 6 |
embryonic head | 1.44e-09 | 6 |
trachea | 2.35e-08 | 7 |
respiratory airway | 2.35e-08 | 7 |
simple columnar epithelium | 8.37e-07 | 9 |