FFCP PHASE1:Mm9::chr13:4190474..4190488,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2841 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:4190474..4190488,+ | |||
|description=CAGE_peak_at_chr13:4190474..4190488,+ | |description=CAGE_peak_at_chr13:4190474..4190488,+ | ||
|id=chr13:4190474..4190488,+ | |id=chr13:4190474..4190488,+ | ||
|ontology_enrichment_celltype=CL:0002563!5.84e-07!9;CL:0002251!5.84e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.11e-11,9;CL:0002251,5.11e-11,9;CL:0000239,3.04e-10,6;CL:0000677,3.04e-10,6;CL:0000584,3.04e-10,6;CL:0000066,5.88e-09,25;CL:0000075,1.16e-08,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!6.72e-22!128;UBERON:0001555!6.72e-22!128;UBERON:0007026!6.72e-22!128;UBERON:0004119!8.79e-22!130;UBERON:0000925!8.79e-22!130;UBERON:0006595!8.79e-22!130;UBERON:0004921!2.49e-20!126;UBERON:0004185!2.49e-20!126;UBERON:0005409!4.85e-20!59;UBERON:0000160!3.10e-16!43;UBERON:0000344!9.39e-12!15;UBERON:0003929!9.24e-11!55;UBERON:0001242!5.36e-10!13;UBERON:0000060!5.36e-10!13;UBERON:0001262!5.36e-10!13;UBERON:0004786!5.36e-10!13;UBERON:0004923!9.19e-08!24;UBERON:0005911!1.93e-07!69;UBERON:0003350!5.84e-07!9;UBERON:0004808!5.84e-07!9;UBERON:0001277!5.84e-07!9;UBERON:0000490!7.45e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.29e-33,31;UBERON:0005409,4.23e-27,47;UBERON:0001007,6.42e-23,116;UBERON:0001555,6.42e-23,116;UBERON:0007026,6.42e-23,116;UBERON:0004119,2.41e-22,118;UBERON:0000925,2.41e-22,118;UBERON:0006595,2.41e-22,118;UBERON:0000344,7.28e-21,15;UBERON:0004921,1.68e-20,114;UBERON:0001242,3.02e-17,13;UBERON:0001262,3.02e-17,13;UBERON:0004786,3.02e-17,13;UBERON:0004923,1.12e-11,24;UBERON:0003350,5.11e-11,9;UBERON:0004808,5.11e-11,9;UBERON:0001277,5.11e-11,9;UBERON:0003929,9.93e-10,55;UBERON:0000485,9.53e-09,11;UBERON:0011216,1.14e-07,194;UBERON:0002108,1.76e-07,4;UBERON:0000490,3.16e-07,66 | |||
|phase1_expression=0,1.39590163055744,4.09499315450582,2.11724947914781,2.00358291978539,2.01455126294268,2.80335168714631,0.258246646883153,0,0,0.171217968225505,0.159544317990673,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,0.0850432901510698,0,0,9.11956809922418,10.0940083669555,1.72269589234506,6.46142994238612,6.24866574789078,2.28028103347649,3.02436155711917,2.66076612786366,0,0,0,0.288851619751275,1.66234645358492,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0.860423876981386,0.679971333707751,0.539703191637817,1.94932925234301,1.79210754838934,0.140444420131752,0,0,0,0,0,0,0,0,0.253359865475099,0,1.48439043634778,0,0.148442139064825,0.346970653532272,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,1.86391761218122,0,0,1.27728527604296,0.599075622529601,0,0.381210681219194,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.94753809370836,2.11560453330835,0,0.696710015581316,1.15980715189884,3.83198696784351,4.89231696458715,7.41879941838981,0.949058123089023,10.8701310117847,4.02136334080431,5.37182474511107,1.9496408711912,0.898819408654221,3.8904848977445,5.37681437786791,0,0,0,0,0,0,0,0,0,0,1.48226313543574,0,0,0.899448449539415,0,0.241177159752417,1.01850340712568,0,0,0.549122826376163,0,0,0,0,0.358794827043824,1.4473305640901,0,0,0,0,0.234690248288502,0,0.476087281772027,0,0.157635144106191,0,0,0,0,0,0,0.54390568381871,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0.164970122972535,0,0.242780636154981,0.906970670894253,0.188605079755898,0,0.307435147943927,1.29214146584111,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.16488625294148,0,0,0,0,1.7488850197791,0,0,0,0.185194527369712,0,0.136694227721025,0.228778173206523,0.509935289981566,0.139951452323658,0,0.954670618015114,0.949007980743406,0.609958401380546,1.40406943068342,0.627264888043406,1.74690050996942,0.539457385539283,0.578574190077352,1.04702376793612,10.2395828900516,0,0.56369293868419,0.149516546043979,0,0,0,0,0,0,0.104859344425711,0,0,0.316011120628178,10.9471616256689,15.8174874033834,6.75588279484534,2.68540043501222,2.38417625737518,2.40390899039938,1.32920574457119,1.71642964911851,1.295515713135,0.504130925684203,0.292373642219257,0.192423683280659,0.233753804363138,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419226325255965,0.183843508450014,0,0.206035057238894,0.320919209591815,0.252697211763798,0.50695859978048,0.377252682772152,0.655490552289177,0.256100609619477,0.402048282689293,0.476293691283074,0.927074607558844,0.77163688185482,0.824171801606613,0.735994600671987,0.685738504770831,0,0.476872379894642,0.145346416632329,0.282328141245992,0.25384382367503,0.73171189149109,0.263069711437843,1.22223702461276,0,0,0.0985044823755635,0.409231043169689,0.309873682371932,0.192906610981141,0,0.935726433781634,1.28922632428979,0,0,0 | |phase1_expression=0,1.39590163055744,4.09499315450582,2.11724947914781,2.00358291978539,2.01455126294268,2.80335168714631,0.258246646883153,0,0,0.171217968225505,0.159544317990673,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,0.0850432901510698,0,0,9.11956809922418,10.0940083669555,1.72269589234506,6.46142994238612,6.24866574789078,2.28028103347649,3.02436155711917,2.66076612786366,0,0,0,0.288851619751275,1.66234645358492,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0.860423876981386,0.679971333707751,0.539703191637817,1.94932925234301,1.79210754838934,0.140444420131752,0,0,0,0,0,0,0,0,0.253359865475099,0,1.48439043634778,0,0.148442139064825,0.346970653532272,0,0.230615497256059,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,1.86391761218122,0,0,1.27728527604296,0.599075622529601,0,0.381210681219194,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.94753809370836,2.11560453330835,0,0.696710015581316,1.15980715189884,3.83198696784351,4.89231696458715,7.41879941838981,0.949058123089023,10.8701310117847,4.02136334080431,5.37182474511107,1.9496408711912,0.898819408654221,3.8904848977445,5.37681437786791,0,0,0,0,0,0,0,0,0,0,1.48226313543574,0,0,0.899448449539415,0,0.241177159752417,1.01850340712568,0,0,0.549122826376163,0,0,0,0,0.358794827043824,1.4473305640901,0,0,0,0,0.234690248288502,0,0.476087281772027,0,0.157635144106191,0,0,0,0,0,0,0.54390568381871,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0.164970122972535,0,0.242780636154981,0.906970670894253,0.188605079755898,0,0.307435147943927,1.29214146584111,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0.16488625294148,0,0,0,0,1.7488850197791,0,0,0,0.185194527369712,0,0.136694227721025,0.228778173206523,0.509935289981566,0.139951452323658,0,0.954670618015114,0.949007980743406,0.609958401380546,1.40406943068342,0.627264888043406,1.74690050996942,0.539457385539283,0.578574190077352,1.04702376793612,10.2395828900516,0,0.56369293868419,0.149516546043979,0,0,0,0,0,0,0.104859344425711,0,0,0.316011120628178,10.9471616256689,15.8174874033834,6.75588279484534,2.68540043501222,2.38417625737518,2.40390899039938,1.32920574457119,1.71642964911851,1.295515713135,0.504130925684203,0.292373642219257,0.192423683280659,0.233753804363138,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419226325255965,0.183843508450014,0,0.206035057238894,0.320919209591815,0.252697211763798,0.50695859978048,0.377252682772152,0.655490552289177,0.256100609619477,0.402048282689293,0.476293691283074,0.927074607558844,0.77163688185482,0.824171801606613,0.735994600671987,0.685738504770831,0,0.476872379894642,0.145346416632329,0.282328141245992,0.25384382367503,0.73171189149109,0.263069711437843,1.22223702461276,0,0,0.0985044823755635,0.409231043169689,0.309873682371932,0.192906610981141,0,0.935726433781634,1.28922632428979,0,0,0 | ||
|short_description=p@chr13:4190474..4190488,+ | |short_description=p@chr13:4190474..4190488,+ | ||
}} | }} |
Latest revision as of 23:47, 5 August 2015
Short description: | p@chr13:4190474..4190488, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:4190474..4190488, + |
Coexpression cluster: | MCL_coexpression_mm9:2841 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.11e-11 | 9 |
epithelial cell of alimentary canal | 5.11e-11 | 9 |
brush border epithelial cell | 3.04e-10 | 6 |
gut absorptive cell | 3.04e-10 | 6 |
enterocyte | 3.04e-10 | 6 |
epithelial cell | 5.88e-09 | 25 |
columnar/cuboidal epithelial cell | 1.16e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.29e-33 | 31 |
gastrointestinal system | 4.23e-27 | 47 |
digestive system | 6.42e-23 | 116 |
digestive tract | 6.42e-23 | 116 |
primitive gut | 6.42e-23 | 116 |
endoderm-derived structure | 2.41e-22 | 118 |
endoderm | 2.41e-22 | 118 |
presumptive endoderm | 2.41e-22 | 118 |
mucosa | 7.28e-21 | 15 |
subdivision of digestive tract | 1.68e-20 | 114 |
intestinal mucosa | 3.02e-17 | 13 |
wall of intestine | 3.02e-17 | 13 |
gastrointestinal system mucosa | 3.02e-17 | 13 |
organ component layer | 1.12e-11 | 24 |
epithelium of mucosa | 5.11e-11 | 9 |
gastrointestinal system epithelium | 5.11e-11 | 9 |
intestinal epithelium | 5.11e-11 | 9 |
gut epithelium | 9.93e-10 | 55 |
simple columnar epithelium | 9.53e-09 | 11 |
organ system subdivision | 1.14e-07 | 194 |
small intestine | 1.76e-07 | 4 |
unilaminar epithelium | 3.16e-07 | 66 |