FFCP PHASE1:Hg19::chr10:12198986..12199025,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55176 | |EntrezGene=55176 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17702 | |HGNC=17702 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000466451_5end | |association_with_transcript=0bp_to_ENST00000466451_5end | ||
|cluster_id=chr10:12198986..12199025,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_3_at_SEC61A2_5end | |description=CAGE_peak_3_at_SEC61A2_5end | ||
|id=chr10:12198986..12199025,+ | |id=chr10:12198986..12199025,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002253;3.34e-11;2!CL:0002567;6.78e-08;3!CL:0000182;1.11e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,2.47e-11,2;CL:0002567,5.93e-08,3;CL:0000182,1.09e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.31e-08;11!UBERON:0006241;6.78e-08;3!UBERON:0003057;6.78e-08;3!UBERON:0009497;4.45e-07;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.49e-09!57;UBERON:0005068!2.49e-09!57;UBERON:0006241!2.49e-09!57;UBERON:0007135!2.49e-09!57;UBERON:0002020!9.14e-09!34;UBERON:0003528!9.14e-09!34;UBERON:0000955!1.90e-08!69;UBERON:0006238!1.90e-08!69;UBERON:0001017!4.35e-08!82;UBERON:0005743!6.31e-08!86;UBERON:0002780!2.87e-07!41;UBERON:0001890!2.87e-07!41;UBERON:0006240!2.87e-07!41;UBERON:0003080!5.51e-07!42;UBERON:0000073!5.57e-07!94;UBERON:0001016!5.57e-07!94;UBERON:0002616!6.84e-07!59;UBERON:0002791!8.38e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.05e-17;19!UBERON:0006925;3.05e-17;19!UBERON:0002423;3.33e-13;25!UBERON:0002771;3.34e-11;2!UBERON:0002365;1.26e-10;31!UBERON:0002330;1.26e-10;31!UBERON:0002368;5.59e-09;33!UBERON:0002240;6.78e-08;3!UBERON:0005174;6.78e-08;3!UBERON:0001137;6.78e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.18e-17,19;UBERON:0006925,3.18e-17,19;UBERON:0008836,3.18e-17,19;UBERON:0008835,6.20e-15,22;UBERON:0003894,6.20e-15,22;UBERON:0009854,2.65e-14,23;UBERON:0007499,3.44e-13,25;UBERON:0009497,3.44e-13,25;UBERON:0000015,3.44e-13,25;UBERON:0002423,3.44e-13,25;UBERON:0006235,3.44e-13,25;UBERON:0004161,3.44e-13,25;UBERON:0009856,1.07e-12,26;UBERON:0002771,4.52e-11,2;UBERON:0002365,1.04e-10,31;UBERON:0002330,1.04e-10,31;UBERON:0002368,1.60e-09,35;UBERON:0003929,2.15e-09,54;UBERON:0002240,7.76e-08,3;UBERON:0005174,7.76e-08,3;UBERON:0001137,7.76e-08,3;UBERON:0000949,1.79e-07,45 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0.251248665256743,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0.334372990781356,0.651844533267181,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0.289648807765598,0,0,0,0.361439152384566,0,0,0,0,0,0,0.087834785693126,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0.494533858557114,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0.515281080091258,0,0,0.0974370051611986,0,0,0,0,0,0,0.193260853163297,0,0,0.487894824518382,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,6.33775174109154,0,5.90789906681404,0,0.983907508344908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0.197030760201927,0.215627574859517,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0.207970861530807,0.356857977594324,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0.0920809889358963,0.114814448164607,0,0,0,0.15403067420883,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,1.54561517471583,0,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60044461320525,0,0,0,0.229723400206959,0,0,0.569647187174163,0,0,0,0,0,0.106824071127473,0,0,0.185803175125719,0,0.142283686696828,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.556608588971108,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0.361789315876224,0,0,0,0,0.10893846351899,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,1.83758992864123,0,0,0,0,0.296521128680622,0.123563938946503,0,0,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0.450970258243478,0,0,0,0,0,0,0.138674673013139,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0,0,0.144090417154106,0,0.343189995723929,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0.157566364614447,0.412079291905832,0.13480708770837,0,0,0,0.544813624446302,0,0,0,0.2249738915515,0,0.242998226632099,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,5.56898487976713,1.32506888912221,0.387848869084652,0.39669780522807,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,1.09823638411767,0,0,0.110929051536852,0.18628920882415,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0.147855149989634,0,0,0,0,0,0,0,0.380805212168795,0,0,0.107410557042488,0,0,0.400027764663154,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0,0.163565394255844,0,0.245772908753719,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6124909547064,0.0642292250964595,0,0,0,0,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0.781078098613847,0,0.126831620387814,0,0,0,0,0,0,0,0.606965604236632,0,0.0887023701626388,0.115233987555779,0,0.0679697329768317,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0.47775168788705,0.0714765441766563,0.316027223465453,0,0,0,0,0.17071847709395,0,0,0.118332000730565,0,0.423387050190929,0,0.31020638566432,0,0,0.098150233615243,0,0,0,0,0,0,0.198950775161368,0.118920090777569,0,0,0,0,0.218559560503957,0,0,0.235676547101626,0.785233868459781,0,1.2679671827502,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0.0679914901909147,0.436350690340377,0,0,0,0,0,0.109265571963696,0.633492505057185,0,0,0,0,0,0.267964130156178,0,0.103432995861895,0,0,0,0,0,0.0636471582781649,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0.251248665256743,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.263384084775077,0,0,0,0.334372990781356,0.651844533267181,0,0,0,0,0,0.270803863765016,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0.289648807765598,0,0,0,0.361439152384566,0,0,0,0,0,0,0.087834785693126,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0.494533858557114,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0.515281080091258,0,0,0.0974370051611986,0,0,0,0,0,0,0.193260853163297,0,0,0.487894824518382,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,6.33775174109154,0,5.90789906681404,0,0.983907508344908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0.197030760201927,0.215627574859517,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0.207970861530807,0.356857977594324,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0.0920809889358963,0.114814448164607,0,0,0,0.15403067420883,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,1.54561517471583,0,0.082509499920588,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60044461320525,0,0,0,0.229723400206959,0,0,0.569647187174163,0,0,0,0,0,0.106824071127473,0,0,0.185803175125719,0,0.142283686696828,0,0,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,0.556608588971108,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0.361789315876224,0,0,0,0,0.10893846351899,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,1.83758992864123,0,0,0,0,0.296521128680622,0.123563938946503,0,0,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0.450970258243478,0,0,0,0,0,0,0.138674673013139,0.173559738335131,0,0,0,0,0,0,0,0,0,0,0,0,0.189932387867636,0,0,0,0,0.144090417154106,0,0.343189995723929,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0.157566364614447,0.412079291905832,0.13480708770837,0,0,0,0.544813624446302,0,0,0,0.2249738915515,0,0.242998226632099,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,5.56898487976713,1.32506888912221,0.387848869084652,0.39669780522807,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,1.09823638411767,0,0,0.110929051536852,0.18628920882415,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0.147855149989634,0,0,0,0,0,0,0,0.380805212168795,0,0,0.107410557042488,0,0,0.400027764663154,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0.176689145945881,0,0,0,0,0,0.138258436151731,0,0,0.163565394255844,0,0.245772908753719,0,0,0,0,0,0,0.279759015438889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6124909547064,0.0642292250964595,0,0,0,0,0.0691572524642179,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0.781078098613847,0,0.126831620387814,0,0,0,0,0,0,0,0.606965604236632,0,0.0887023701626388,0.115233987555779,0,0.0679697329768317,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0.47775168788705,0.0714765441766563,0.316027223465453,0,0,0,0,0.17071847709395,0,0,0.118332000730565,0,0.423387050190929,0,0.31020638566432,0,0,0.098150233615243,0,0,0,0,0,0,0.198950775161368,0.118920090777569,0,0,0,0,0.218559560503957,0,0,0.235676547101626,0.785233868459781,0,1.2679671827502,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0.0679914901909147,0.436350690340377,0,0,0,0,0,0.109265571963696,0.633492505057185,0,0,0,0,0,0.267964130156178,0,0.103432995861895,0,0,0,0,0,0.0636471582781649,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@SEC61A2 | |short_description=p3@SEC61A2 | ||
}} | }} |
Latest revision as of 18:34, 16 September 2015
Short description: | p3@SEC61A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SEC61A2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000466451_5end |
EntrezGene: | SEC61A2 |
HGNC: | 17702 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 2.47e-11 | 2 |
light melanocyte | 5.93e-08 | 3 |
hepatocyte | 1.09e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 3.18e-17 | 19 |
digestive gland | 3.18e-17 | 19 |
liver bud | 3.18e-17 | 19 |
hepatic diverticulum | 6.20e-15 | 22 |
liver primordium | 6.20e-15 | 22 |
digestive tract diverticulum | 2.65e-14 | 23 |
epithelial sac | 3.44e-13 | 25 |
epithelium of foregut-midgut junction | 3.44e-13 | 25 |
anatomical boundary | 3.44e-13 | 25 |
hepatobiliary system | 3.44e-13 | 25 |
foregut-midgut junction | 3.44e-13 | 25 |
septum transversum | 3.44e-13 | 25 |
sac | 1.07e-12 | 26 |
middle temporal gyrus | 4.52e-11 | 2 |
exocrine gland | 1.04e-10 | 31 |
exocrine system | 1.04e-10 | 31 |
endocrine gland | 1.60e-09 | 35 |
gut epithelium | 2.15e-09 | 54 |
spinal cord | 7.76e-08 | 3 |
dorsal region element | 7.76e-08 | 3 |
dorsum | 7.76e-08 | 3 |
endocrine system | 1.79e-07 | 45 |