FFCP PHASE1:Hg19::chr10:17428996..17429003,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=3bp_to_ENST00000451225_5end | |association_with_transcript=3bp_to_ENST00000451225_5end | ||
|cluster_id=chr10:17428996..17429003,+ | |||
|coexpression_cluster_id=C3000 | |||
|description=CAGE_peak_2_at_ENST00000451225_5end | |description=CAGE_peak_2_at_ENST00000451225_5end | ||
|id=chr10:17428996..17429003,+ | |id=chr10:17428996..17429003,+ | ||
|ontology_enrichment_celltype=CL:0000039!3.96e-22!7;CL:0000586!3.96e-22!7;CL:0002253!3.68e-09!2 | |ontology_enrichment_celltype=CL:0000039!3.96e-22!7;CL:0000586!3.96e-22!7;CL:0002253!3.68e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0000167;1.19e-23;1!CL:0000164;1.19e-23;1!CL:0000502;1.19e-23;1!CL:0000172;1.19e-23;1!CL:0000173;1.19e-23;1!CL:0000039;1.69e-13;7!CL:0000586;1.69e-13;7!CL:0002541;1.26e-08;3!CL:0002327;7.27e-07;4!CL:0000083;8.85e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,1.34e-23,1;CL:0000164,1.34e-23,1;CL:0000502,1.34e-23,1;CL:0000172,1.34e-23,1;CL:0000173,1.34e-23,1;CL:0002351,1.34e-23,1;CL:0000039,1.31e-13,7;CL:0000586,1.31e-13,7;CL:0002541,1.30e-08,3;CL:0002327,7.27e-07,4;CL:0000083,9.63e-07,4 | |||
|ontology_enrichment_development_v019=CL:0002351;1.19e-23;1!UBERON:0008425;1.67e-23;1!UBERON:0009117;9.65e-10;10!UBERON:0005564;9.65e-10;10 | |||
|ontology_enrichment_disease=DOID:3095!2.72e-18!22;DOID:2994!2.72e-18!22;DOID:0050687!1.63e-07!143;DOID:305!6.96e-07!106;DOID:14566!9.13e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:4430;1.19e-23;1!DOID:1799;3.67e-23;1!DOID:10165;3.67e-23;1!DOID:1798;3.67e-23;1!DOID:3095;2.07e-16;22!DOID:2994;2.07e-16;22!DOID:5093;7.27e-07;4!DOID:1612;7.27e-07;4!DOID:1793;8.85e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.34e-23,1;DOID:1799,5.13e-23,1;DOID:10165,5.13e-23,1;DOID:1798,5.13e-23,1;DOID:3095,1.99e-16,22;DOID:2994,1.99e-16,22;DOID:0050687,1.15e-09,143;DOID:305,1.84e-07,106;DOID:5093,7.27e-07,4;DOID:1612,7.27e-07,4;DOID:1793,9.63e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.12e-08!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.26e-08;3!UBERON:0000920;1.26e-08;3!UBERON:0001911;7.27e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.30e-08,3;UBERON:0001911,7.27e-07,4;UBERON:0005333,7.27e-07,4;UBERON:0008425,7.27e-07,4;UBERON:0005311,7.27e-07,4 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0.354668382198357,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0.15350367472613,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97363999987065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0.23056390438806,0.987334088507493,1.73835795075213,0,0.0915975934018623,1.06606955203727,0,0,0,0,0.392125068635479,0.167821586975843,0,0,0,0,0.282706142867882,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.480952921509202,0,0,0,0.572682980829578,1.54435498075768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,3.49487848582361,0,0,0,0,0.423366660328922,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04762677792569,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0.606965604236632,0,0.177404740325278,0,0,0,0,0,0,0.39246546425257,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860454717640555,0.236664001461131,0.426067023795788,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0,0,0.301925687133347,0,0,0,0,3.29947165942276,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00933139868063,0.98339014767326,0.886889507080059,0.305966489225945,1.60330443159336,0,0.50141507858475,0.0757786982182394,0,0,0,0,0,0,0,0,0,0.202117188958219,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@ENST00000451225 | |short_description=p2@ENST00000451225 | ||
}} | }} |
Latest revision as of 12:19, 23 July 2015
Short description: | p2@ENST00000451225 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000451225_5end |
Coexpression cluster: | C3000_gastrointestinal_somatostatinoma_choriocarcinoma_smallcell_pancreatic_small_teratocarcinoma |
Association with transcript: | 3bp_to_ENST00000451225_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 1.34e-23 | 1 |
enteroendocrine cell | 1.34e-23 | 1 |
type D enteroendocrine cell | 1.34e-23 | 1 |
somatostatin secreting cell | 1.34e-23 | 1 |
pancreatic D cell | 1.34e-23 | 1 |
progenitor cell of endocrine pancreas | 1.34e-23 | 1 |
germ line cell | 1.31e-13 | 7 |
germ cell | 1.31e-13 | 7 |
chorionic membrane mesenchymal stem cell | 1.30e-08 | 3 |
mammary gland epithelial cell | 7.27e-07 | 4 |
epithelial cell of pancreas | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.30e-08 | 3 |
mammary gland | 7.27e-07 | 4 |
mammary bud | 7.27e-07 | 4 |
mammary ridge | 7.27e-07 | 4 |
mammary placode | 7.27e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.34e-23 | 1 |
islet cell tumor | 5.13e-23 | 1 |
endocrine pancreas cancer | 5.13e-23 | 1 |
pancreatic endocrine carcinoma | 5.13e-23 | 1 |
germ cell and embryonal cancer | 1.99e-16 | 22 |
germ cell cancer | 1.99e-16 | 22 |
cell type cancer | 1.15e-09 | 143 |
carcinoma | 1.84e-07 | 106 |
thoracic cancer | 7.27e-07 | 4 |
breast cancer | 7.27e-07 | 4 |
pancreatic cancer | 9.63e-07 | 4 |