FFCP PHASE1:Hg19::chr10:21581922..21581939,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:21581922..21581939,- | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_at_chr10:21581922..21581939,- | |description=CAGE_peak_at_chr10:21581922..21581939,- | ||
|id=chr10:21581922..21581939,- | |id=chr10:21581922..21581939,- | ||
|ontology_enrichment_celltype=CL:0002322!2.38e-10!5 | |ontology_enrichment_celltype=CL:0002322!2.38e-10!5 | ||
|ontology_enrichment_celltype_v019=CL:0002322;1.01e-35;5!CL:0000540;3.60e-17;6!CL:0000404;3.60e-17;6!CL:0000039;4.07e-15;7!CL:0000586;4.07e-15;7!CL:0002321;4.01e-12;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.05e-35,5;CL:0000540,3.14e-17,6;CL:0000031,3.14e-17,6;CL:0000404,3.14e-17,6;CL:0000039,4.17e-15,7;CL:0000586,4.17e-15,7;CL:0000047,4.46e-13,8 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.15e-18;10!UBERON:0005564;2.15e-18;10!CL:0000031;3.60e-17;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;1.75e-08;22!DOID:2994;1.75e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.77e-08,22;DOID:2994,1.77e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.70e-20!115;UBERON:0001017!1.53e-16!82;UBERON:0005743!1.90e-16!86;UBERON:0001049!6.71e-16!57;UBERON:0005068!6.71e-16!57;UBERON:0006241!6.71e-16!57;UBERON:0007135!6.71e-16!57;UBERON:0000073!6.41e-14!94;UBERON:0001016!6.41e-14!94;UBERON:0002298!1.53e-12!8;UBERON:0002616!2.02e-12!59;UBERON:0002346!2.74e-12!90;UBERON:0003075!3.16e-12!86;UBERON:0007284!3.16e-12!86;UBERON:0000955!3.67e-12!69;UBERON:0006238!3.67e-12!69;UBERON:0003080!2.94e-11!42;UBERON:0001893!1.54e-10!34;UBERON:0002020!1.63e-10!34;UBERON:0003528!1.63e-10!34;UBERON:0002780!2.87e-10!41;UBERON:0001890!2.87e-10!41;UBERON:0006240!2.87e-10!41;UBERON:0002791!1.15e-09!33;UBERON:0001869!1.25e-08!32;UBERON:0003056!9.67e-08!61;UBERON:0002619!2.00e-07!22;UBERON:0001950!7.80e-07!20;UBERON:0000153!8.73e-07!129;UBERON:0007811!8.73e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.66e-13;8!UBERON:0005795;3.26e-12;1!UBERON:0003135;7.97e-10;11!UBERON:0000991;7.05e-09;21!UBERON:0000922;3.19e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.71e-13,8;UBERON:0003135,8.10e-10,11;UBERON:0000991,7.12e-09,21;UBERON:0009196,7.12e-09,21;UBERON:0009117,7.12e-09,21;UBERON:0005564,7.12e-09,21;UBERON:0004176,1.77e-08,22 | |||
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| ||
|short_description=p@chr10:21581922..21581939,- | |short_description=p@chr10:21581922..21581939,- | ||
}} | }} |
Latest revision as of 12:31, 23 July 2015
Short description: | p@chr10:21581922..21581939, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:21581922..21581939, - |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.05e-35 | 5 |
neuron | 3.14e-17 | 6 |
neuroblast | 3.14e-17 | 6 |
electrically signaling cell | 3.14e-17 | 6 |
germ line cell | 4.17e-15 | 7 |
germ cell | 4.17e-15 | 7 |
neuronal stem cell | 4.46e-13 | 8 |
Ontology term | p-value | n |
---|---|---|
testis | 2.71e-13 | 8 |
male reproductive organ | 8.10e-10 | 11 |
gonad | 7.12e-09 | 21 |
indifferent external genitalia | 7.12e-09 | 21 |
indifferent gonad | 7.12e-09 | 21 |
gonad primordium | 7.12e-09 | 21 |
external genitalia | 1.77e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.77e-08 | 22 |
germ cell cancer | 1.77e-08 | 22 |