FFCP PHASE1:Hg19::chr10:28506871..28506903,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:28506871..28506903,- | |||
|coexpression_cluster_id=C199 | |||
|description=CAGE_peak_at_chr10:28506871..28506903,- | |description=CAGE_peak_at_chr10:28506871..28506903,- | ||
|id=chr10:28506871..28506903,- | |id=chr10:28506871..28506903,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000222;3.83e-07;1 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.50e-14;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.61e-07,143;DOID:162,1.94e-07,235;DOID:305,2.50e-07,106;DOID:14566,3.47e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.13e-17!9;UBERON:0001557!1.74e-08!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.31e-49;9!UBERON:0001557;1.31e-49;9!UBERON:0000072;2.28e-10;37!UBERON:0000065;9.12e-09;44!UBERON:0007195;7.18e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.32e-49,9;UBERON:0001557,1.08e-22,19;UBERON:0008947,1.45e-10,38;UBERON:0003258,1.45e-10,38;UBERON:0000072,3.02e-08,47;UBERON:0000065,5.56e-07,54;UBERON:0007195,6.99e-07,1 | |||
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| ||
|short_description=p@chr10:28506871..28506903,- | |short_description=p@chr10:28506871..28506903,- | ||
}} | }} |
Latest revision as of 12:57, 23 July 2015
Short description: | p@chr10:28506871..28506903, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:28506871..28506903, - |
Coexpression cluster: | C199_glioblastoma_B_osteosarcoma_Fibroblast_heart_rhabdomyosarcoma_myxofibrosarcoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 1.32e-49 | 9 |
upper respiratory tract | 1.08e-22 | 19 |
respiratory primordium | 1.45e-10 | 38 |
endoderm of foregut | 1.45e-10 | 38 |
segment of respiratory tract | 3.02e-08 | 47 |
respiratory tract | 5.56e-07 | 54 |
stroma of bone marrow | 6.99e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.61e-07 | 143 |
cancer | 1.94e-07 | 235 |
carcinoma | 2.50e-07 | 106 |
disease of cellular proliferation | 3.47e-07 | 239 |