FFCP PHASE1:Hg19::chr11:120906905..120906918,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:120906905..120906918,+ | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_at_chr11:120906905..120906918,+ | |description=CAGE_peak_at_chr11:120906905..120906918,+ | ||
|id=chr11:120906905..120906918,+ | |id=chr11:120906905..120906918,+ | ||
|ontology_enrichment_celltype=CL:0000764!6.84e-07!2;CL:0000765!6.84e-07!2;CL:0000050!6.84e-07!2;CL:0000038!6.84e-07!2;CL:0000558!6.84e-07!2;CL:0000547!6.84e-07!2;CL:0000549!6.84e-07!2;CL:0000550!6.84e-07!2;CL:0000552!6.84e-07!2;CL:0000080!7.04e-07!6 | |ontology_enrichment_celltype=CL:0000764!6.84e-07!2;CL:0000765!6.84e-07!2;CL:0000050!6.84e-07!2;CL:0000038!6.84e-07!2;CL:0000558!6.84e-07!2;CL:0000547!6.84e-07!2;CL:0000549!6.84e-07!2;CL:0000550!6.84e-07!2;CL:0000552!6.84e-07!2;CL:0000080!7.04e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000764;1.91e-17;2!CL:0000558;1.91e-17;2!CL:0000453;6.20e-15;5!CL:0000990;1.57e-08;8!CL:0000451;4.61e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.91e-17,2;CL:0000765,1.91e-17,2;CL:0000050,1.91e-17,2;CL:0000038,1.91e-17,2;CL:0000558,1.91e-17,2;CL:0000547,1.91e-17,2;CL:0000549,1.91e-17,2;CL:0000550,1.91e-17,2;CL:0000552,1.91e-17,2;CL:0000453,5.12e-15,5;CL:0000990,1.42e-08,8;CL:0000451,4.24e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0010115;4.15e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.39e-30!115;UBERON:0000178!6.76e-29!15;UBERON:0000179!6.76e-29!15;UBERON:0000463!6.76e-29!15;UBERON:0002106!1.92e-08!3;UBERON:0004854!1.92e-08!3;UBERON:0009034!1.92e-08!3;UBERON:0002095!1.92e-08!3;UBERON:0004782!1.92e-08!3;UBERON:0003281!1.92e-08!3;UBERON:0009664!1.92e-08!3;UBERON:0002296!1.92e-08!3;UBERON:0005602!1.92e-08!3;UBERON:0001179!1.92e-08!3;UBERON:0006293!1.92e-08!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.56e-43;15!UBERON:0000179;3.56e-43;15!UBERON:0000463;3.56e-43;15!UBERON:0002390;2.07e-22;32!UBERON:0002193;5.25e-14;42!UBERON:0002363;4.15e-09;1!UBERON:0002372;4.15e-09;1!UBERON:0001961;4.15e-09;1!UBERON:0001744;4.15e-09;1!UBERON:0001042;4.15e-09;1!UBERON:0001735;4.15e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.65e-43,15;UBERON:0000179,3.65e-43,15;UBERON:0000463,3.65e-43,15;UBERON:0007023,3.18e-15,114;UBERON:0002363,3.83e-09,1;UBERON:0007645,3.83e-09,1;UBERON:0007647,3.83e-09,1;UBERON:0010115,3.83e-09,1;UBERON:0002372,5.28e-09,1;UBERON:0001961,5.28e-09,1;UBERON:0001744,5.28e-09,1;UBERON:0001735,5.28e-09,1;UBERON:0002193,1.12e-08,108;UBERON:0002390,3.64e-08,98;UBERON:0003061,3.64e-08,98 | |||
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| ||
|short_description=p@chr11:120906905..120906918,+ | |short_description=p@chr11:120906905..120906918,+ | ||
}} | }} |
Latest revision as of 19:09, 23 July 2015
Short description: | p@chr11:120906905..120906918, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:120906905..120906918, + |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.91e-17 | 2 |
erythroblast | 1.91e-17 | 2 |
megakaryocyte-erythroid progenitor cell | 1.91e-17 | 2 |
erythroid progenitor cell | 1.91e-17 | 2 |
reticulocyte | 1.91e-17 | 2 |
proerythroblast | 1.91e-17 | 2 |
basophilic erythroblast | 1.91e-17 | 2 |
polychromatophilic erythroblast | 1.91e-17 | 2 |
orthochromatic erythroblast | 1.91e-17 | 2 |
Langerhans cell | 5.12e-15 | 5 |
conventional dendritic cell | 1.42e-08 | 8 |
dendritic cell | 4.24e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
blood | 3.65e-43 | 15 |
haemolymphatic fluid | 3.65e-43 | 15 |
organism substance | 3.65e-43 | 15 |
adult organism | 3.18e-15 | 114 |
dura mater | 3.83e-09 | 1 |
future meninx | 3.83e-09 | 1 |
ectomeninx | 3.83e-09 | 1 |
future dura mater | 3.83e-09 | 1 |
tonsil | 5.28e-09 | 1 |
mucosa-associated lymphoid tissue | 5.28e-09 | 1 |
lymphoid tissue | 5.28e-09 | 1 |
tonsillar ring | 5.28e-09 | 1 |
hemolymphoid system | 1.12e-08 | 108 |
hematopoietic system | 3.64e-08 | 98 |
blood island | 3.64e-08 | 98 |