FFCP PHASE1:Mm9::chr17:32795966..32795986,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=631304 | |EntrezGene=631304 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=126 | |||
|TSSclassifier=NA | |||
|UniProt=G3UW81 | |UniProt=G3UW81 | ||
|association_with_transcript=-368bp_to_ENSMUST00000165061_5end | |association_with_transcript=-368bp_to_ENSMUST00000165061_5end | ||
|cluster_id=chr17:32795966..32795986,+ | |||
|description=CAGE_peak_2_at_Cyp4f40_5end | |description=CAGE_peak_2_at_Cyp4f40_5end | ||
|id=chr17:32795966..32795986,+ | |id=chr17:32795966..32795986,+ | ||
|ontology_enrichment_celltype=CL:0002563!1.81e-13!9;CL:0002251!1.81e-13!9;CL:0000239!8.06e-10!6;CL:0000677!8.06e-10!6;CL:0000212!8.06e-10!6;CL:0000584!8.06e-10!6;CL:0000075!2.88e-08!7;CL:0002076!3.09e-07!15;CL:0000066!5.56e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,2.89e-21,9;CL:0002251,2.89e-21,9;CL:0000239,3.19e-15,6;CL:0000677,3.19e-15,6;CL:0000584,3.19e-15,6;CL:0000075,5.91e-13,7;CL:0000066,1.60e-12,25;CL:0002076,3.98e-12,15;CL:0000682,4.51e-09,3;CL:0000223,1.05e-08,20;CL:0002250,1.26e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.76e-31!43;UBERON:0005409!3.31e-25!59;UBERON:0000344!8.86e-23!15;UBERON:0001242!9.57e-20!13;UBERON:0000060!9.57e-20!13;UBERON:0001262!9.57e-20!13;UBERON:0004786!9.57e-20!13;UBERON:0003350!1.81e-13!9;UBERON:0004808!1.81e-13!9;UBERON:0001277!1.81e-13!9;UBERON:0004923!1.50e-12!24;UBERON:0000485!1.26e-10!11;UBERON:0001007!7.52e-10!128;UBERON:0001555!7.52e-10!128;UBERON:0007026!7.52e-10!128;UBERON:0004119!1.55e-09!130;UBERON:0000925!1.55e-09!130;UBERON:0006595!1.55e-09!130;UBERON:0004921!1.71e-08!126;UBERON:0004185!1.71e-08!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.74e-60,31;UBERON:0005409,5.26e-41,47;UBERON:0000344,9.91e-37,15;UBERON:0001242,1.10e-31,13;UBERON:0001262,1.10e-31,13;UBERON:0004786,1.10e-31,13;UBERON:0004923,1.13e-21,24;UBERON:0003350,2.89e-21,9;UBERON:0004808,2.89e-21,9;UBERON:0001277,2.89e-21,9;UBERON:0000485,4.12e-17,11;UBERON:0001007,1.23e-15,116;UBERON:0001555,1.23e-15,116;UBERON:0007026,1.23e-15,116;UBERON:0004119,2.90e-15,118;UBERON:0000925,2.90e-15,118;UBERON:0006595,2.90e-15,118;UBERON:0004921,2.50e-13,114;UBERON:0002108,7.41e-12,4;UBERON:0000331,1.14e-09,3;UBERON:0002116,1.14e-09,3;UBERON:0001204,1.14e-09,3;UBERON:0001168,1.14e-09,3;UBERON:0001155,6.30e-07,2;UBERON:0000059,6.30e-07,2 | |||
|phase1_expression=0,13.9590163055744,7.27998783023258,12.0985684522732,14.0250804384977,6.88305014838748,6.54115393667472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.3993180514066,13.0763290208287,14.3557991028755,15.9381938578858,13.3592164265251,48.4559719613753,46.3735438758273,16.1863272778372,0,0,0,2.3108129580102,2.99222361645286,1.83752420636132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,2.39786147410026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.775258509631,0,0,20.1811073614787,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5734010554815,15.073682299822,0,0,0.77320476793256,1.61346819698674,2.44615848229357,2.09248188723815,12.3377556001573,1.4822905925161,1.50801125280162,2.38747766449381,3.8992817423824,12.5834717211591,14.0489732418551,11.948476395262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.57850175237612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0.330613822901344,0,17.2387914478085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0.222246727801615,0.412070114477788,0,0.252697211763798,0,0,0,0.128050304809739,0.114870937911227,0,0.115884325944855,0,0.824171801606613,0.147198920134397,0,0,0,0,0.282328141245992,0.0846146078916765,0.182927972872773,0,0.271608227691724,0,0.118635018124174,0.29551344712669,0,0.154936841185966,0,0,0,0,0,0,0 | |phase1_expression=0,13.9590163055744,7.27998783023258,12.0985684522732,14.0250804384977,6.88305014838748,6.54115393667472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.3993180514066,13.0763290208287,14.3557991028755,15.9381938578858,13.3592164265251,48.4559719613753,46.3735438758273,16.1863272778372,0,0,0,2.3108129580102,2.99222361645286,1.83752420636132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,2.39786147410026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.775258509631,0,0,20.1811073614787,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5734010554815,15.073682299822,0,0,0.77320476793256,1.61346819698674,2.44615848229357,2.09248188723815,12.3377556001573,1.4822905925161,1.50801125280162,2.38747766449381,3.8992817423824,12.5834717211591,14.0489732418551,11.948476395262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.57850175237612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0.330613822901344,0,17.2387914478085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0.222246727801615,0.412070114477788,0,0.252697211763798,0,0,0,0.128050304809739,0.114870937911227,0,0.115884325944855,0,0.824171801606613,0.147198920134397,0,0,0,0,0.282328141245992,0.0846146078916765,0.182927972872773,0,0.271608227691724,0,0.118635018124174,0.29551344712669,0,0.154936841185966,0,0,0,0,0,0,0 | ||
|short_description=p2@Cyp4f40 | |short_description=p2@Cyp4f40 | ||
}} | }} |
Latest revision as of 06:28, 26 September 2015
Short description: | p2@Cyp4f40 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cyp4f40_5end |
Coexpression cluster: | MCL_coexpression_mm9:126 |
Association with transcript: | -368bp_to_ENSMUST00000165061_5end |
EntrezGene: | Cyp4f40 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 2.89e-21 | 9 |
epithelial cell of alimentary canal | 2.89e-21 | 9 |
brush border epithelial cell | 3.19e-15 | 6 |
gut absorptive cell | 3.19e-15 | 6 |
enterocyte | 3.19e-15 | 6 |
columnar/cuboidal epithelial cell | 5.91e-13 | 7 |
epithelial cell | 1.60e-12 | 25 |
endo-epithelial cell | 3.98e-12 | 15 |
M cell of gut | 4.51e-09 | 3 |
endodermal cell | 1.05e-08 | 20 |
intestinal crypt stem cell | 1.26e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.74e-60 | 31 |
gastrointestinal system | 5.26e-41 | 47 |
mucosa | 9.91e-37 | 15 |
intestinal mucosa | 1.10e-31 | 13 |
wall of intestine | 1.10e-31 | 13 |
gastrointestinal system mucosa | 1.10e-31 | 13 |
organ component layer | 1.13e-21 | 24 |
epithelium of mucosa | 2.89e-21 | 9 |
gastrointestinal system epithelium | 2.89e-21 | 9 |
intestinal epithelium | 2.89e-21 | 9 |
simple columnar epithelium | 4.12e-17 | 11 |
digestive system | 1.23e-15 | 116 |
digestive tract | 1.23e-15 | 116 |
primitive gut | 1.23e-15 | 116 |
endoderm-derived structure | 2.90e-15 | 118 |
endoderm | 2.90e-15 | 118 |
presumptive endoderm | 2.90e-15 | 118 |
subdivision of digestive tract | 2.50e-13 | 114 |
small intestine | 7.41e-12 | 4 |
ileal mucosa | 1.14e-09 | 3 |
ileum | 1.14e-09 | 3 |
mucosa of small intestine | 1.14e-09 | 3 |
wall of small intestine | 1.14e-09 | 3 |
colon | 6.30e-07 | 2 |
large intestine | 6.30e-07 | 2 |