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FFCP PHASE1:Hg19::chr12:111537227..111537239,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=23316
|EntrezGene=23316
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=19347
|HGNC=19347
|TSSclassifier=strong
|UniProt=F5GWR6,F8W1D5,Q9BZV4
|UniProt=F5GWR6,F8W1D5,Q9BZV4
|association_with_transcript=-10bp_to_ENST00000397643,ENST00000552889,uc001tsb.1_5end
|association_with_transcript=-10bp_to_ENST00000397643,ENST00000552889,uc001tsb.1_5end
|cluster_id=chr12:111537227..111537239,+
|coexpression_cluster_id=C44
|description=CAGE_peak_7_at_CUX2_5end
|description=CAGE_peak_7_at_CUX2_5end
|id=chr12:111537227..111537239,+
|id=chr12:111537227..111537239,+
|ontology_enrichment_celltype=CL:0000784!8.05e-27!3;CL:0000767!2.54e-12!3;CL:0000842!2.54e-12!3;CL:0000224!1.84e-09!4;CL:0000451!1.07e-07!10
|ontology_enrichment_celltype=CL:0000784!8.05e-27!3;CL:0000767!2.54e-12!3;CL:0000842!2.54e-12!3;CL:0000224!1.84e-09!4;CL:0000451!1.07e-07!10
|ontology_enrichment_celltype_v019=CL:0000784;2.79e-195;3!CL:0000451;2.16e-54;10!CL:0000840;2.19e-12;5!CL:0000990;1.04e-08;8
|ontology_enrichment_celltype_v019_2=CL:0000784,2.79e-195,3;CL:0000451,2.16e-54,10;CL:0000840,2.19e-12,5;CL:0001029,2.19e-12,5;CL:0000990,1.04e-08,8
|ontology_enrichment_development_v019=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002372!6.31e-10!1;UBERON:0001961!6.31e-10!1;UBERON:0001744!6.31e-10!1;UBERON:0001735!6.31e-10!1;UBERON:0001154!8.17e-10!1;UBERON:0001153!8.17e-10!1;UBERON:0002902!1.48e-09!1;UBERON:0009899!1.48e-09!1;UBERON:0007190!1.62e-09!1;UBERON:0002581!1.76e-09!1;UBERON:0002022!2.67e-09!1;UBERON:0002370!5.87e-09!4;UBERON:0005058!5.87e-09!4;UBERON:0009113!5.87e-09!4;UBERON:0003295!5.87e-09!4;UBERON:0005562!5.87e-09!4;UBERON:0001042!6.22e-08!10;UBERON:0009145!6.22e-08!10;UBERON:0000974!7.01e-08!10;UBERON:0006562!2.97e-07!11
|ontology_enrichment_uberon_v019=
|ontology_enrichment_uberon_v019_2=
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0.309632246632152,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.187931170809,25.7397709851058,24.1447375864217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203974470572744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0.404112318087525,0,0,0,0,0,0,0,0,0,0,0,0
|short_description=p7@CUX2
|short_description=p7@CUX2
}}
}}

Latest revision as of 09:32, 16 September 2015

Short description:p7@CUX2
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_7_at_CUX2_5end
Coexpression cluster:C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature
Association with transcript: -10bp_to_ENST00000397643, ENST00000552889, uc001tsb.1_5end
EntrezGene:CUX2
HGNC: 19347
UniProt: F5GWR6F8W1D5Q9BZV4
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data