FFCP PHASE1:Mm9::chr10:94580525..94580530,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=26 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:94580525..94580530,+ | |||
|description=CAGE_peak_at_chr10:94580525..94580530,+ | |description=CAGE_peak_at_chr10:94580525..94580530,+ | ||
|id=chr10:94580525..94580530,+ | |id=chr10:94580525..94580530,+ | ||
|ontology_enrichment_celltype=CL:0000075!2.97e-21!7;CL:0000239!1.90e-16!6;CL:0000677!1.90e-16!6;CL:0000212!1.90e-16!6;CL:0000584!1.90e-16!6;CL:0000066!1.34e-14!25;CL:0000197!1.10e-12!2;CL:0002491!1.10e-12!2;CL:0000098!1.10e-12!2;CL:0002563!4.77e-11!9;CL:0002251!4.77e-11!9;CL:0000115!1.20e-07!1;CL:0000213!1.20e-07!1;CL:0002078!1.20e-07!1;CL:0002262!1.20e-07!1;CL:1000398!1.20e-07!1;CL:0000223!1.41e-07!20;CL:0000006!1.83e-07!1;CL:0002374!1.83e-07!1;CL:0000202!1.83e-07!1;CL:0000199!1.83e-07!1;CL:0000855!1.83e-07!1;CL:0000589!1.83e-07!1;CL:0000710!7.23e-07!1;CL:0002077!7.23e-07!1;CL:0005014!7.23e-07!1;CL:0002315!7.23e-07!1;CL:0002490!7.23e-07!1 | |ontology_enrichment_celltype=CL:0000075!2.97e-21!7;CL:0000239!1.90e-16!6;CL:0000677!1.90e-16!6;CL:0000212!1.90e-16!6;CL:0000584!1.90e-16!6;CL:0000066!1.34e-14!25;CL:0000197!1.10e-12!2;CL:0002491!1.10e-12!2;CL:0000098!1.10e-12!2;CL:0002563!4.77e-11!9;CL:0002251!4.77e-11!9;CL:0000115!1.20e-07!1;CL:0000213!1.20e-07!1;CL:0002078!1.20e-07!1;CL:0002262!1.20e-07!1;CL:1000398!1.20e-07!1;CL:0000223!1.41e-07!20;CL:0000006!1.83e-07!1;CL:0002374!1.83e-07!1;CL:0000202!1.83e-07!1;CL:0000199!1.83e-07!1;CL:0000855!1.83e-07!1;CL:0000589!1.83e-07!1;CL:0000710!7.23e-07!1;CL:0002077!7.23e-07!1;CL:0005014!7.23e-07!1;CL:0002315!7.23e-07!1;CL:0002490!7.23e-07!1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000213,3.07e-86,1;CL:0002078,3.07e-86,1;CL:0000115,3.07e-86,1;CL:0002262,3.07e-86,1;CL:1000398,3.07e-86,1;CL:0000215,5.61e-30,3;CL:0000182,1.16e-18,5;CL:0000222,8.67e-14,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000485!2.67e-19!11;UBERON:0003465!1.10e-12!2;UBERON:0008193!1.10e-12!2;UBERON:0000032!1.10e-12!2;UBERON:0005744!1.10e-12!2;UBERON:0008001!1.10e-12!2;UBERON:0007497!1.10e-12!2;UBERON:0009955!1.10e-12!2;UBERON:0003067!1.10e-12!2;UBERON:0002546!1.10e-12!2;UBERON:0007914!1.10e-12!2;UBERON:0003457!1.10e-12!2;UBERON:0004766!1.10e-12!2;UBERON:0005253!1.10e-12!2;UBERON:0002227!1.10e-12!2;UBERON:0001846!1.10e-12!2;UBERON:0003128!1.10e-12!2;UBERON:0002241!1.10e-12!2;UBERON:0002105!1.10e-12!2;UBERON:0001678!1.10e-12!2;UBERON:0003129!1.10e-12!2;UBERON:0001694!1.10e-12!2;UBERON:0004681!1.10e-12!2;UBERON:0001839!1.10e-12!2;UBERON:0001690!1.10e-12!2;UBERON:0001844!1.10e-12!2;UBERON:0001849!1.10e-12!2;UBERON:0002499!1.10e-12!2;UBERON:0005944!1.10e-12!2;UBERON:0001855!1.10e-12!2;UBERON:0001703!1.10e-12!2;UBERON:0003069!1.10e-12!2;UBERON:0003051!1.10e-12!2;UBERON:0004288!1.10e-12!2;UBERON:0004637!1.10e-12!2;UBERON:0004761!1.10e-12!2;UBERON:0010113!1.10e-12!2;UBERON:0003089!1.10e-12!2;UBERON:0009123!1.10e-12!2;UBERON:0009617!1.10e-12!2;UBERON:0005641!1.10e-12!2;UBERON:0001242!1.68e-11!13;UBERON:0000060!1.68e-11!13;UBERON:0001262!1.68e-11!13;UBERON:0004786!1.68e-11!13;UBERON:0003350!4.77e-11!9;UBERON:0004808!4.77e-11!9;UBERON:0001277!4.77e-11!9;UBERON:0000344!5.89e-10!15;UBERON:0004923!1.19e-08!24;UBERON:0000353!1.20e-07!1;UBERON:0003497!1.20e-07!1;UBERON:0003909!1.20e-07!1;UBERON:0003835!1.20e-07!1;UBERON:0003513!1.20e-07!1;UBERON:0001281!1.20e-07!1;UBERON:0001280!1.20e-07!1;UBERON:0004647!1.20e-07!1;UBERON:0000029!1.59e-07!1;UBERON:0001097!1.59e-07!1;UBERON:0003968!1.59e-07!1;UBERON:0008785!1.59e-07!1;UBERON:0001467!1.59e-07!1;UBERON:0001421!1.59e-07!1;UBERON:0000305!3.20e-07!1 | |ontology_enrichment_uberon=UBERON:0000485!2.67e-19!11;UBERON:0003465!1.10e-12!2;UBERON:0008193!1.10e-12!2;UBERON:0000032!1.10e-12!2;UBERON:0005744!1.10e-12!2;UBERON:0008001!1.10e-12!2;UBERON:0007497!1.10e-12!2;UBERON:0009955!1.10e-12!2;UBERON:0003067!1.10e-12!2;UBERON:0002546!1.10e-12!2;UBERON:0007914!1.10e-12!2;UBERON:0003457!1.10e-12!2;UBERON:0004766!1.10e-12!2;UBERON:0005253!1.10e-12!2;UBERON:0002227!1.10e-12!2;UBERON:0001846!1.10e-12!2;UBERON:0003128!1.10e-12!2;UBERON:0002241!1.10e-12!2;UBERON:0002105!1.10e-12!2;UBERON:0001678!1.10e-12!2;UBERON:0003129!1.10e-12!2;UBERON:0001694!1.10e-12!2;UBERON:0004681!1.10e-12!2;UBERON:0001839!1.10e-12!2;UBERON:0001690!1.10e-12!2;UBERON:0001844!1.10e-12!2;UBERON:0001849!1.10e-12!2;UBERON:0002499!1.10e-12!2;UBERON:0005944!1.10e-12!2;UBERON:0001855!1.10e-12!2;UBERON:0001703!1.10e-12!2;UBERON:0003069!1.10e-12!2;UBERON:0003051!1.10e-12!2;UBERON:0004288!1.10e-12!2;UBERON:0004637!1.10e-12!2;UBERON:0004761!1.10e-12!2;UBERON:0010113!1.10e-12!2;UBERON:0003089!1.10e-12!2;UBERON:0009123!1.10e-12!2;UBERON:0009617!1.10e-12!2;UBERON:0005641!1.10e-12!2;UBERON:0001242!1.68e-11!13;UBERON:0000060!1.68e-11!13;UBERON:0001262!1.68e-11!13;UBERON:0004786!1.68e-11!13;UBERON:0003350!4.77e-11!9;UBERON:0004808!4.77e-11!9;UBERON:0001277!4.77e-11!9;UBERON:0000344!5.89e-10!15;UBERON:0004923!1.19e-08!24;UBERON:0000353!1.20e-07!1;UBERON:0003497!1.20e-07!1;UBERON:0003909!1.20e-07!1;UBERON:0003835!1.20e-07!1;UBERON:0003513!1.20e-07!1;UBERON:0001281!1.20e-07!1;UBERON:0001280!1.20e-07!1;UBERON:0004647!1.20e-07!1;UBERON:0000029!1.59e-07!1;UBERON:0001097!1.59e-07!1;UBERON:0003968!1.59e-07!1;UBERON:0008785!1.59e-07!1;UBERON:0001467!1.59e-07!1;UBERON:0001421!1.59e-07!1;UBERON:0000305!3.20e-07!1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,3.07e-86,1;UBERON:0001281,3.07e-86,1;UBERON:0000353,3.07e-86,1;UBERON:0003497,3.07e-86,1;UBERON:0003909,3.07e-86,1;UBERON:0003928,3.07e-86,1;UBERON:0003835,3.07e-86,1;UBERON:0003513,3.07e-86,1;UBERON:0001280,3.07e-86,1;UBERON:0004647,3.07e-86,1;UBERON:0002294,3.07e-86,1;UBERON:0001173,3.07e-86,1;UBERON:0004912,3.07e-86,1;UBERON:0005171,3.07e-86,1;UBERON:0000055,1.16e-18,5;UBERON:0007500,1.16e-18,5;UBERON:0001981,1.16e-18,5;UBERON:0002049,1.16e-18,5;UBERON:0007798,1.16e-18,5;UBERON:0004537,1.16e-18,5;UBERON:0006965,1.16e-18,5;UBERON:0000058,8.67e-14,7 | |||
|phase1_expression=0.480446541314382,0.348975407639361,0.454999239389536,0.60492842261366,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.5519769973231,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.480446541314382,0.348975407639361,0.454999239389536,0.60492842261366,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.5519769973231,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:94580525..94580530,+ | |short_description=p@chr10:94580525..94580530,+ | ||
}} | }} |
Latest revision as of 01:33, 5 August 2015
Short description: | p@chr10:94580525..94580530, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:94580525..94580530, + |
Coexpression cluster: | MCL_coexpression_mm9:26 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 3.07e-86 | 1 |
meso-epithelial cell | 3.07e-86 | 1 |
endothelial cell | 3.07e-86 | 1 |
endothelial cell of sinusoid | 3.07e-86 | 1 |
endothelial cell of hepatic sinusoid | 3.07e-86 | 1 |
barrier cell | 5.61e-30 | 3 |
hepatocyte | 1.16e-18 | 5 |
mesodermal cell | 8.67e-14 | 7 |
Ontology term | p-value | n |
---|---|---|
bile duct | 3.07e-86 | 1 |
hepatic sinusoid | 3.07e-86 | 1 |
parenchyma | 3.07e-86 | 1 |
abdomen blood vessel | 3.07e-86 | 1 |
sinusoid | 3.07e-86 | 1 |
digestive system duct | 3.07e-86 | 1 |
abdominal segment blood vessel | 3.07e-86 | 1 |
trunk blood vessel | 3.07e-86 | 1 |
liver parenchyma | 3.07e-86 | 1 |
liver lobule | 3.07e-86 | 1 |
biliary system | 3.07e-86 | 1 |
biliary tree | 3.07e-86 | 1 |
biliary bud | 3.07e-86 | 1 |
hepatic duct | 3.07e-86 | 1 |
vessel | 1.16e-18 | 5 |
epithelial tube open at both ends | 1.16e-18 | 5 |
blood vessel | 1.16e-18 | 5 |
vasculature | 1.16e-18 | 5 |
vascular system | 1.16e-18 | 5 |
blood vasculature | 1.16e-18 | 5 |
vascular cord | 1.16e-18 | 5 |
duct | 8.67e-14 | 7 |