FFCP PHASE1:Hg19::chr13:100634777..100634788,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7546 | |EntrezGene=7546 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=12873 | |HGNC=12873 | ||
|TSSclassifier=strong | |||
|UniProt=O95409 | |UniProt=O95409 | ||
|association_with_transcript=458bp_to_AF104902,AF193855_5end | |association_with_transcript=458bp_to_AF104902,AF193855_5end | ||
|cluster_id=chr13:100634777..100634788,+ | |||
|description=CAGE_peak_13_at_ZIC2_5end | |description=CAGE_peak_13_at_ZIC2_5end | ||
|id=chr13:100634777..100634788,+ | |id=chr13:100634777..100634788,+ | ||
|ontology_enrichment_celltype=CL:0002322!6.07e-12!5;CL:0002319!1.57e-10!25;CL:0000133!2.53e-10!59;CL:0000243!3.60e-08!15;CL:0000125!3.60e-08!15;CL:0000030!3.60e-08!15;CL:0000339!3.60e-08!15;CL:0000221!9.28e-08!71;CL:0002603!2.69e-07!3;CL:0000095!3.93e-07!17;CL:0000123!3.93e-07!17;CL:0000708!4.04e-07!3 | |ontology_enrichment_celltype=CL:0002322!6.07e-12!5;CL:0002319!1.57e-10!25;CL:0000133!2.53e-10!59;CL:0000243!3.60e-08!15;CL:0000125!3.60e-08!15;CL:0000030!3.60e-08!15;CL:0000339!3.60e-08!15;CL:0000221!9.28e-08!71;CL:0002603!2.69e-07!3;CL:0000095!3.93e-07!17;CL:0000123!3.93e-07!17;CL:0000708!4.04e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002575;7.79e-79;2!CL:0000669;4.05e-40;4!CL:0000540;5.73e-08;6!CL:0000404;5.73e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002575,1.16e-78,2;CL:0000669,4.94e-40,4;CL:0000540,5.92e-08,6;CL:0000031,5.92e-08,6;CL:0000404,5.92e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.51e-53;3!CL:0000031;5.73e-08;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.29e-23!82;UBERON:0000073!2.37e-21!94;UBERON:0001016!2.37e-21!94;UBERON:0005743!2.64e-21!86;UBERON:0000955!1.27e-19!69;UBERON:0006238!1.27e-19!69;UBERON:0002616!5.31e-15!59;UBERON:0002346!9.24e-14!90;UBERON:0000924!2.35e-13!173;UBERON:0006601!2.35e-13!173;UBERON:0004733!4.67e-13!12;UBERON:0002028!4.67e-13!12;UBERON:0007277!4.67e-13!12;UBERON:0001049!8.11e-13!57;UBERON:0005068!8.11e-13!57;UBERON:0006241!8.11e-13!57;UBERON:0007135!8.11e-13!57;UBERON:0000033!1.07e-12!123;UBERON:0004732!6.61e-12!13;UBERON:0000153!1.10e-11!129;UBERON:0007811!1.10e-11!129;UBERON:0002680!1.78e-11!9;UBERON:0001895!1.78e-11!9;UBERON:0010092!1.78e-11!9;UBERON:0004121!2.73e-11!169;UBERON:0003075!3.39e-11!86;UBERON:0007284!3.39e-11!86;UBERON:0003076!4.55e-10!15;UBERON:0003057!4.55e-10!15;UBERON:0002037!8.78e-10!6;UBERON:0006215!8.78e-10!6;UBERON:0002791!3.38e-07!33;UBERON:0002771!3.55e-07!3;UBERON:0003210!4.04e-07!3;UBERON:0002020!5.61e-07!34;UBERON:0003528!5.61e-07!34;UBERON:0001893!6.52e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;2.54e-27;6!UBERON:0002680;1.29e-18;9!UBERON:0001895;1.29e-18;9!UBERON:0004733;3.04e-14;12!UBERON:0002028;3.04e-14;12!UBERON:0004732;3.12e-13;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,2.08e-27,6;UBERON:0006215,2.08e-27,6;UBERON:0002680,1.13e-18,9;UBERON:0001895,1.13e-18,9;UBERON:0010092,1.13e-18,9;UBERON:0004733,2.75e-14,12;UBERON:0002028,2.75e-14,12;UBERON:0007277,2.75e-14,12;UBERON:0004732,2.85e-13,13;UBERON:0003076,1.21e-11,15;UBERON:0003057,1.21e-11,15 | |||
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| ||
|short_description=p13@ZIC2 | |short_description=p13@ZIC2 | ||
}} | }} |
Latest revision as of 07:59, 16 September 2015
Short description: | p13@ZIC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_ZIC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 458bp_to_AF104902, AF193855_5end |
EntrezGene: | ZIC2 |
HGNC: | 12873 |
UniProt: | O95409 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 1.16e-78 | 2 |
pericyte cell | 4.94e-40 | 4 |
neuron | 5.92e-08 | 6 |
neuroblast | 5.92e-08 | 6 |
electrically signaling cell | 5.92e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 2.08e-27 | 6 |
rhombic lip | 2.08e-27 | 6 |
regional part of metencephalon | 1.13e-18 | 9 |
metencephalon | 1.13e-18 | 9 |
future metencephalon | 1.13e-18 | 9 |
segmental subdivision of hindbrain | 2.75e-14 | 12 |
hindbrain | 2.75e-14 | 12 |
presumptive hindbrain | 2.75e-14 | 12 |
segmental subdivision of nervous system | 2.85e-13 | 13 |
posterior neural tube | 1.21e-11 | 15 |
chordal neural plate | 1.21e-11 | 15 |