FFCP PHASE1:Mm9::chr11:120565301..120565316,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:120565301..120565316,+ | |||
|description=CAGE_peak_at_chr11:120565301..120565316,+ | |description=CAGE_peak_at_chr11:120565301..120565316,+ | ||
|id=chr11:120565301..120565316,+ | |id=chr11:120565301..120565316,+ | ||
|ontology_enrichment_celltype=CL:0000333!2.19e-10!10;CL:0000095!2.19e-10!10;CL:0000243!2.19e-10!10;CL:0000123!2.19e-10!10;CL:0000125!2.19e-10!10;CL:0000030!2.19e-10!10;CL:0000339!2.19e-10!10;CL:0002453!1.33e-08!8;CL:0000128!5.25e-07!6;CL:0000126!5.25e-07!6;CL:0000127!5.25e-07!6 | |ontology_enrichment_celltype=CL:0000333!2.19e-10!10;CL:0000095!2.19e-10!10;CL:0000243!2.19e-10!10;CL:0000123!2.19e-10!10;CL:0000125!2.19e-10!10;CL:0000030!2.19e-10!10;CL:0000339!2.19e-10!10;CL:0002453!1.33e-08!8;CL:0000128!5.25e-07!6;CL:0000126!5.25e-07!6;CL:0000127!5.25e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000333,1.17e-17,10;CL:0000095,1.17e-17,10;CL:0000243,1.17e-17,10;CL:0000123,1.17e-17,10;CL:0000125,1.17e-17,10;CL:0000030,1.17e-17,10;CL:0000339,1.17e-17,10;CL:0002453,2.52e-16,8;CL:0000128,1.28e-15,6;CL:0000126,1.28e-15,6;CL:0000127,1.28e-15,6;CL:0002605,1.94e-08,2;CL:0002604,1.94e-08,2;CL:0002603,2.51e-08,2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!6.00e-17!18;UBERON:0000948!6.00e-17!18;UBERON:0005498!6.00e-17!18;UBERON:0004140!6.00e-17!18;UBERON:0009881!6.00e-17!18;UBERON:0004141!6.00e-17!18;UBERON:0003084!6.00e-17!18;UBERON:0007005!6.00e-17!18;UBERON:0004139!6.00e-17!18;UBERON:0004291!6.00e-17!18;UBERON:0004535!1.85e-14!23;UBERON:0001009!1.85e-14!23;UBERON:0004872!1.03e-08!33;UBERON:0003103!3.57e-07!43 | |ontology_enrichment_uberon=UBERON:0007100!6.00e-17!18;UBERON:0000948!6.00e-17!18;UBERON:0005498!6.00e-17!18;UBERON:0004140!6.00e-17!18;UBERON:0009881!6.00e-17!18;UBERON:0004141!6.00e-17!18;UBERON:0003084!6.00e-17!18;UBERON:0007005!6.00e-17!18;UBERON:0004139!6.00e-17!18;UBERON:0004291!6.00e-17!18;UBERON:0004535!1.85e-14!23;UBERON:0001009!1.85e-14!23;UBERON:0004872!1.03e-08!33;UBERON:0003103!3.57e-07!43 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.00e-33,18;UBERON:0000948,1.00e-33,18;UBERON:0005498,1.00e-33,18;UBERON:0004140,1.00e-33,18;UBERON:0009881,1.00e-33,18;UBERON:0004141,1.00e-33,18;UBERON:0003084,1.00e-33,18;UBERON:0007005,1.00e-33,18;UBERON:0004139,1.00e-33,18;UBERON:0004291,1.00e-33,18;UBERON:0004535,6.95e-26,23;UBERON:0001009,6.95e-26,23;UBERON:0004872,2.55e-17,33;UBERON:0003103,8.52e-15,43;UBERON:0003914,1.91e-11,47;UBERON:0010314,7.43e-09,92 | |||
|phase1_expression=0,0,0.909998478779072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,2.3998863419011,0.91763712426868,0.57423196411502,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.734187008646726,2.34717403304412,2.18025156380447,4.39372365468944,1.36100929351998,0.55994568650145,4.31257693094915,0,0,0,2.57259436035947,0.85960031981627,3.6097046459421,0,0,0,0.677689064138264,0.889294796111139,0,0,0,0.599200221036809,1.53687322128622,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,3.7863096666592,0.831287161174641,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,1.08245520505607,0,0.505524445014783,0,0,0,0.520455980298408,0,0,0.452167921657868,0.470354828542819,0.251333182659351,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0.210441855886474,0.130120442962704,0,0.180062129805349,0,0.272145996605311,0.384341160854549,0,0,0,0,0.175951124163949,0,0,0.348252166522167,0,0.398068533636986,0,0,0,2.07125772535502,4.92504725960302,4.32148947506436,7.10234206755631,3.73852040320067,4.47374627373397,2.32533944750408,2.41446061259657,2.21854150497622,2.13927804887525,1.47750717671186,0.162137619091711,0.584799949701329,0.219550115291051,0.536825675041487,0.210289948564127,0.308713837137853,0,0,0,0,0.257734922644187,0,0,0,0,0.164698954724011,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.488894929326078,0.339490171550376,0,0.167506257441816,0.238043640886014,0.975668239288994,0.315270288212382,0.221464689648775,0.318909537314974,0,0,0.578596234326046,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0.283880170416537,0.534196811001766,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0.322928853391811,0.0603129249281559,0.119372344003136,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0.897099276263873,0.827292452285488,1.75006069509643,0.387479470433193,0.675824501963113,1.05621514781179,0.13020438484395,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0.486213434136588,0,0,0,0,0,0,0,0.377252682772152,0,0.256100609619477,0.17230640686684,0,0.231768651889711,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0,0,0,0,0.561142271657738,0,0,0,0,0,0,0.233931608445408,0.429742108096597,0.956441660344217,0.220591419119515,0.231867835620421 | |phase1_expression=0,0,0.909998478779072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,2.3998863419011,0.91763712426868,0.57423196411502,0.430761996159075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.734187008646726,2.34717403304412,2.18025156380447,4.39372365468944,1.36100929351998,0.55994568650145,4.31257693094915,0,0,0,2.57259436035947,0.85960031981627,3.6097046459421,0,0,0,0.677689064138264,0.889294796111139,0,0,0,0.599200221036809,1.53687322128622,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,3.7863096666592,0.831287161174641,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,1.08245520505607,0,0.505524445014783,0,0,0,0.520455980298408,0,0,0.452167921657868,0.470354828542819,0.251333182659351,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0,0,0.210441855886474,0.130120442962704,0,0.180062129805349,0,0.272145996605311,0.384341160854549,0,0,0,0,0.175951124163949,0,0,0.348252166522167,0,0.398068533636986,0,0,0,2.07125772535502,4.92504725960302,4.32148947506436,7.10234206755631,3.73852040320067,4.47374627373397,2.32533944750408,2.41446061259657,2.21854150497622,2.13927804887525,1.47750717671186,0.162137619091711,0.584799949701329,0.219550115291051,0.536825675041487,0.210289948564127,0.308713837137853,0,0,0,0,0.257734922644187,0,0,0,0,0.164698954724011,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.488894929326078,0.339490171550376,0,0.167506257441816,0.238043640886014,0.975668239288994,0.315270288212382,0.221464689648775,0.318909537314974,0,0,0.578596234326046,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0.283880170416537,0.534196811001766,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0.322928853391811,0.0603129249281559,0.119372344003136,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0.897099276263873,0.827292452285488,1.75006069509643,0.387479470433193,0.675824501963113,1.05621514781179,0.13020438484395,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0.486213434136588,0,0,0,0,0,0,0,0.377252682772152,0,0.256100609619477,0.17230640686684,0,0.231768651889711,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0,0,0,0,0.561142271657738,0,0,0,0,0,0,0.233931608445408,0.429742108096597,0.956441660344217,0.220591419119515,0.231867835620421 | ||
|short_description=p@chr11:120565301..120565316,+ | |short_description=p@chr11:120565301..120565316,+ | ||
}} | }} |
Latest revision as of 15:22, 5 August 2015
Short description: | p@chr11:120565301..120565316, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:120565301..120565316, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 1.17e-17 | 10 |
neuron associated cell | 1.17e-17 | 10 |
glial cell (sensu Vertebrata) | 1.17e-17 | 10 |
neuron associated cell (sensu Vertebrata) | 1.17e-17 | 10 |
glial cell | 1.17e-17 | 10 |
glioblast | 1.17e-17 | 10 |
glioblast (sensu Vertebrata) | 1.17e-17 | 10 |
oligodendrocyte precursor cell | 2.52e-16 | 8 |
oligodendrocyte | 1.28e-15 | 6 |
macroglial cell | 1.28e-15 | 6 |
astrocyte | 1.28e-15 | 6 |
astrocyte of the cerebral cortex | 1.94e-08 | 2 |
astrocyte of the hippocampus | 1.94e-08 | 2 |
astrocyte of the cerebellum | 2.51e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.00e-33 | 18 |
heart | 1.00e-33 | 18 |
primitive heart tube | 1.00e-33 | 18 |
primary heart field | 1.00e-33 | 18 |
anterior lateral plate mesoderm | 1.00e-33 | 18 |
heart tube | 1.00e-33 | 18 |
heart primordium | 1.00e-33 | 18 |
cardiac mesoderm | 1.00e-33 | 18 |
cardiogenic plate | 1.00e-33 | 18 |
heart rudiment | 1.00e-33 | 18 |
cardiovascular system | 6.95e-26 | 23 |
circulatory system | 6.95e-26 | 23 |
splanchnic layer of lateral plate mesoderm | 2.55e-17 | 33 |
compound organ | 8.52e-15 | 43 |
epithelial tube | 1.91e-11 | 47 |
structure with developmental contribution from neural crest | 7.43e-09 | 92 |