FFCP PHASE1:Hg19::chr13:114748246..114748260,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:114748246..114748260,- | |||
|coexpression_cluster_id=C285 | |||
|description=CAGE_peak_at_chr13:114748246..114748260,- | |description=CAGE_peak_at_chr13:114748246..114748260,- | ||
|id=chr13:114748246..114748260,- | |id=chr13:114748246..114748260,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002593;2.21e-15;2!CL:0002595;6.21e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002593,2.74e-15,2;CL:0002595,6.77e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.25e-24;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4362;4.79e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,4.79e-07,5;DOID:305,5.49e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0001737!5.02e-32!9;UBERON:0001557!1.36e-20!19;UBERON:0000072!1.76e-08!46;UBERON:0008947!1.31e-07!38;UBERON:0003258!1.31e-07!38;UBERON:0000477!4.99e-07!286;UBERON:0000065!5.06e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.58e-78;9!UBERON:0001557;5.58e-78;9!UBERON:0000065;6.92e-20;44!UBERON:0000072;5.74e-17;37!UBERON:0002456;2.21e-15;2!UBERON:0001004;5.87e-11;65!UBERON:0003834;6.21e-07;5!UBERON:0001533;6.21e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,4.40e-78,9;UBERON:0001557,2.40e-37,19;UBERON:0008947,6.20e-19,38;UBERON:0003258,6.20e-19,38;UBERON:0000072,2.17e-15,47;UBERON:0002456,2.74e-15,2;UBERON:0000065,1.91e-13,54;UBERON:0001004,6.69e-10,74;UBERON:0001041,1.84e-08,87;UBERON:0003834,6.77e-07,5;UBERON:0001533,6.77e-07,5 | |||
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| ||
|short_description=p@chr13:114748246..114748260,- | |short_description=p@chr13:114748246..114748260,- | ||
}} | }} |
Latest revision as of 14:51, 24 July 2015
Short description: | p@chr13:114748246..114748260, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:114748246..114748260, - |
Coexpression cluster: | C285_cervical_Hep2_small_colon_temporal_duodenum_bronchogenic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 2.74e-15 | 2 |
smooth muscle cell of the subclavian artery | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
larynx | 4.40e-78 | 9 |
upper respiratory tract | 2.40e-37 | 19 |
respiratory primordium | 6.20e-19 | 38 |
endoderm of foregut | 6.20e-19 | 38 |
segment of respiratory tract | 2.17e-15 | 47 |
internal thoracic artery | 2.74e-15 | 2 |
respiratory tract | 1.91e-13 | 54 |
respiratory system | 6.69e-10 | 74 |
foregut | 1.84e-08 | 87 |
thoracic segment blood vessel | 6.77e-07 | 5 |
subclavian artery | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 4.79e-07 | 5 |
carcinoma | 5.49e-07 | 106 |