FFCP PHASE1:Mm9::chr1:72896200..72896228,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=336 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:72896200..72896228,+ | |||
|description=CAGE_peak_at_chr1:72896200..72896228,+ | |description=CAGE_peak_at_chr1:72896200..72896228,+ | ||
|id=chr1:72896200..72896228,+ | |id=chr1:72896200..72896228,+ | ||
|ontology_enrichment_celltype=CL:0002453!1.16e-08!8;CL:0000128!6.37e-07!6;CL:0000126!6.37e-07!6;CL:0000127!6.37e-07!6 | |ontology_enrichment_celltype=CL:0002453!1.16e-08!8;CL:0000128!6.37e-07!6;CL:0000126!6.37e-07!6;CL:0000127!6.37e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002453,1.87e-31,8;CL:0000333,5.92e-25,10;CL:0000095,5.92e-25,10;CL:0000243,5.92e-25,10;CL:0000123,5.92e-25,10;CL:0000125,5.92e-25,10;CL:0000030,5.92e-25,10;CL:0000339,5.92e-25,10;CL:0000128,3.90e-24,6;CL:0000126,3.90e-24,6;CL:0000127,3.90e-24,6;CL:0002605,1.66e-09,2;CL:0002604,1.66e-09,2;CL:0002603,3.18e-09,2;CL:0000878,6.59e-09,2;CL:0000129,6.59e-09,2;CL:0000219,1.91e-08,54 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.52e-08!22;UBERON:0007499!3.52e-08!22;UBERON:0006925!3.52e-08!22;UBERON:0009497!3.52e-08!22;UBERON:0000015!3.52e-08!22;UBERON:0002423!3.52e-08!22;UBERON:0006235!3.52e-08!22;UBERON:0008835!3.52e-08!22;UBERON:0003894!3.52e-08!22;UBERON:0004161!3.52e-08!22;UBERON:0008836!3.52e-08!22;UBERON:0009854!1.47e-07!23;UBERON:0009856!1.47e-07!23;UBERON:0002365!2.27e-07!25;UBERON:0002330!2.27e-07!25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.38e-19,22;UBERON:0007499,1.38e-19,22;UBERON:0006925,1.38e-19,22;UBERON:0009497,1.38e-19,22;UBERON:0000015,1.38e-19,22;UBERON:0002423,1.38e-19,22;UBERON:0006235,1.38e-19,22;UBERON:0008835,1.38e-19,22;UBERON:0003894,1.38e-19,22;UBERON:0004161,1.38e-19,22;UBERON:0008836,1.38e-19,22;UBERON:0009854,1.18e-18,23;UBERON:0009856,1.18e-18,23;UBERON:0002365,5.13e-17,25;UBERON:0002330,5.13e-17,25;UBERON:0005256,3.16e-12,45;UBERON:0005172,5.42e-11,49;UBERON:0005173,5.42e-11,49;UBERON:0002417,5.42e-11,49;UBERON:0000916,5.42e-11,49;UBERON:0003104,7.14e-10,61;UBERON:0009142,7.14e-10,61;UBERON:0003914,8.84e-10,47;UBERON:0009569,1.44e-07,66;UBERON:0005177,4.72e-07,79 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9534788208725,15.0437357902508,19.3323840806335,43.3578674935652,3.07970127575798,4.31257693094915,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0.338844532069132,2.66788438833342,0,0,0,3.59520132622086,9.60545763303886,0,0.675029691658453,0,0.571301968807607,0.883474163806454,0,0.287536413054709,0,0,0,0.153606533256243,0,0.0914876436024097,0,0.279182999001381,0,0.30559649555362,0.883885756421003,0.284743361598206,0.372798891650601,0,0,0,5.16254326188832,0.679971333707751,1.07940638327563,1.29955283489534,0.896053774194671,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0.173485326766136,0,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0,0,0.125654352112864,0,0,0,0,1.12023300235348,0,0,0.631325567659422,0.390361328888111,0.229902104433473,0.180062129805349,0.150704817835715,0.136072998302656,0.2562274405697,0.281105173679186,0.776110112217047,0,0,0.527853372491847,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0.308713837137853,0,0,0.213288250535234,0,0,0,0.444756087689741,0,0,0,0,0,0,0,0,0,0,0.114248512609729,1.1270773567308,0,0.193952487167626,0.0701358198903186,0,0,0,0,0.889357881261447,0,0,0,0,0,0.25462585178142,0.287696137450811,29.1843408195064,2.47105271869273,25.8782771749238,26.0498663367952,4.99260276983297,2.02063102357689,1.07638448113147,8.68398338454061,0.369506380333209,0.189491411770485,0,0.169745085775188,0,0,0.476087281772027,0.195133647857799,0,0.221464689648775,0.318909537314974,0,0.172684981865896,0.289298117163023,0,0,0,0.275936746304732,0.160550589987792,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0.35613120733451,0.488660878060728,0,0,0.242780636154981,0,0,0.295301892880773,0,0,0,0.356497378384721,0,0,0,0,0,0.388076051348264,0.214337035031592,0,0.356737635204141,0.658196082408484,0,0.23467170806371,0.42366414172764,0,0,0,0.0603129249281559,0.238744688006273,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.609958401380546,0.216010681643603,0.209088296014469,0.218362563746178,0.269728692769641,0.743881101528023,0.26175594198403,0,0,0,0,0.165458490457098,0,0.129159823477731,0.168956125490778,0,0.13020438484395,0.209718688851422,0,0,0,0.405450430580328,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,2.89784391048286,0.375364950902364,0,0.643105137237198,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0.207574695168353,0.798049746802062,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0,0.0936415074698824,0.128050304809739,0.114870937911227,0.476293691283074,0,0,0,0.147198920134397,0.342869252385415,0,0,0.145346416632329,0.0941093804153306,0.169229215783353,0.182927972872773,0,0,0,0.118635018124174,0,0,0.309873682371932,0,0.749431733813838,0,0.859484216193193,0.382576664137687,0,0 | |phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9534788208725,15.0437357902508,19.3323840806335,43.3578674935652,3.07970127575798,4.31257693094915,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0.338844532069132,2.66788438833342,0,0,0,3.59520132622086,9.60545763303886,0,0.675029691658453,0,0.571301968807607,0.883474163806454,0,0.287536413054709,0,0,0,0.153606533256243,0,0.0914876436024097,0,0.279182999001381,0,0.30559649555362,0.883885756421003,0.284743361598206,0.372798891650601,0,0,0,5.16254326188832,0.679971333707751,1.07940638327563,1.29955283489534,0.896053774194671,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0.173485326766136,0,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0,0,0.125654352112864,0,0,0,0,1.12023300235348,0,0,0.631325567659422,0.390361328888111,0.229902104433473,0.180062129805349,0.150704817835715,0.136072998302656,0.2562274405697,0.281105173679186,0.776110112217047,0,0,0.527853372491847,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0.308713837137853,0,0,0.213288250535234,0,0,0,0.444756087689741,0,0,0,0,0,0,0,0,0,0,0.114248512609729,1.1270773567308,0,0.193952487167626,0.0701358198903186,0,0,0,0,0.889357881261447,0,0,0,0,0,0.25462585178142,0.287696137450811,29.1843408195064,2.47105271869273,25.8782771749238,26.0498663367952,4.99260276983297,2.02063102357689,1.07638448113147,8.68398338454061,0.369506380333209,0.189491411770485,0,0.169745085775188,0,0,0.476087281772027,0.195133647857799,0,0.221464689648775,0.318909537314974,0,0.172684981865896,0.289298117163023,0,0,0,0.275936746304732,0.160550589987792,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0,0,0.35613120733451,0.488660878060728,0,0,0.242780636154981,0,0,0.295301892880773,0,0,0,0.356497378384721,0,0,0,0,0,0.388076051348264,0.214337035031592,0,0.356737635204141,0.658196082408484,0,0.23467170806371,0.42366414172764,0,0,0,0.0603129249281559,0.238744688006273,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.609958401380546,0.216010681643603,0.209088296014469,0.218362563746178,0.269728692769641,0.743881101528023,0.26175594198403,0,0,0,0,0.165458490457098,0,0.129159823477731,0.168956125490778,0,0.13020438484395,0.209718688851422,0,0,0,0.405450430580328,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,2.89784391048286,0.375364950902364,0,0.643105137237198,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0.207574695168353,0.798049746802062,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0,0.0936415074698824,0.128050304809739,0.114870937911227,0.476293691283074,0,0,0,0.147198920134397,0.342869252385415,0,0,0.145346416632329,0.0941093804153306,0.169229215783353,0.182927972872773,0,0,0,0.118635018124174,0,0,0.309873682371932,0,0.749431733813838,0,0.859484216193193,0.382576664137687,0,0 | ||
|short_description=p@chr1:72896200..72896228,+ | |short_description=p@chr1:72896200..72896228,+ | ||
}} | }} |
Latest revision as of 23:19, 5 August 2015
Short description: | p@chr1:72896200..72896228, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:72896200..72896228, + |
Coexpression cluster: | MCL_coexpression_mm9:336 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 1.87e-31 | 8 |
migratory neural crest cell | 5.92e-25 | 10 |
neuron associated cell | 5.92e-25 | 10 |
glial cell (sensu Vertebrata) | 5.92e-25 | 10 |
neuron associated cell (sensu Vertebrata) | 5.92e-25 | 10 |
glial cell | 5.92e-25 | 10 |
glioblast | 5.92e-25 | 10 |
glioblast (sensu Vertebrata) | 5.92e-25 | 10 |
oligodendrocyte | 3.90e-24 | 6 |
macroglial cell | 3.90e-24 | 6 |
astrocyte | 3.90e-24 | 6 |
astrocyte of the cerebral cortex | 1.66e-09 | 2 |
astrocyte of the hippocampus | 1.66e-09 | 2 |
astrocyte of the cerebellum | 3.18e-09 | 2 |
central nervous system macrophage | 6.59e-09 | 2 |
microglial cell | 6.59e-09 | 2 |
motile cell | 1.91e-08 | 54 |
Ontology term | p-value | n |
---|---|---|
liver | 1.38e-19 | 22 |
epithelial sac | 1.38e-19 | 22 |
digestive gland | 1.38e-19 | 22 |
epithelium of foregut-midgut junction | 1.38e-19 | 22 |
anatomical boundary | 1.38e-19 | 22 |
hepatobiliary system | 1.38e-19 | 22 |
foregut-midgut junction | 1.38e-19 | 22 |
hepatic diverticulum | 1.38e-19 | 22 |
liver primordium | 1.38e-19 | 22 |
septum transversum | 1.38e-19 | 22 |
liver bud | 1.38e-19 | 22 |
digestive tract diverticulum | 1.18e-18 | 23 |
sac | 1.18e-18 | 23 |
exocrine gland | 5.13e-17 | 25 |
exocrine system | 5.13e-17 | 25 |
trunk mesenchyme | 3.16e-12 | 45 |
abdomen element | 5.42e-11 | 49 |
abdominal segment element | 5.42e-11 | 49 |
abdominal segment of trunk | 5.42e-11 | 49 |
abdomen | 5.42e-11 | 49 |
mesenchyme | 7.14e-10 | 61 |
entire embryonic mesenchyme | 7.14e-10 | 61 |
epithelial tube | 8.84e-10 | 47 |
subdivision of trunk | 1.44e-07 | 66 |
trunk region element | 4.72e-07 | 79 |