FFCP PHASE1:Mm9::chr3:126300333..126300353,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=108058 | |EntrezGene=108058 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=E9PXV3,E9Q1W0,E9Q1T1 | |UniProt=E9PXV3,E9Q1W0,E9Q1T1 | ||
|association_with_transcript=-4bp_to_ENSMUST00000066452,ENSMUST00000106399,ENSMUST00000171289_5end | |association_with_transcript=-4bp_to_ENSMUST00000066452,ENSMUST00000106399,ENSMUST00000171289_5end | ||
|cluster_id=chr3:126300333..126300353,+ | |||
|description=CAGE_peak_5_at_Camk2d_5end | |description=CAGE_peak_5_at_Camk2d_5end | ||
|id=chr3:126300333..126300353,+ | |id=chr3:126300333..126300353,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!5.64e-12!23;UBERON:0001009!5.64e-12!23;UBERON:0007100!1.30e-10!18;UBERON:0000948!1.30e-10!18;UBERON:0005498!1.30e-10!18;UBERON:0004140!1.30e-10!18;UBERON:0009881!1.30e-10!18;UBERON:0004141!1.30e-10!18;UBERON:0003084!1.30e-10!18;UBERON:0007005!1.30e-10!18;UBERON:0004139!1.30e-10!18;UBERON:0004291!1.30e-10!18;UBERON:0004872!3.30e-09!33;UBERON:0003103!1.23e-08!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,4.15e-16,23;UBERON:0001009,4.15e-16,23;UBERON:0007100,8.60e-15,18;UBERON:0000948,8.60e-15,18;UBERON:0005498,8.60e-15,18;UBERON:0004140,8.60e-15,18;UBERON:0009881,8.60e-15,18;UBERON:0004141,8.60e-15,18;UBERON:0003084,8.60e-15,18;UBERON:0007005,8.60e-15,18;UBERON:0004139,8.60e-15,18;UBERON:0004291,8.60e-15,18;UBERON:0004872,5.70e-11,33;UBERON:0010314,5.97e-11,92;UBERON:0003103,3.58e-09,43;UBERON:0004111,5.79e-08,122;UBERON:0000025,1.53e-07,114 | |||
|phase1_expression=0.480446541314382,0,0.454999239389536,1.20985684522732,0,0.33575854382378,0.467225281191051,0.258246646883153,1.68946466582,1.17032263160997,0.856089841127525,0.239316476986009,0.513602189793617,0.174840804837995,0,0,0.699561878128147,2.05050407482854,4.38766187538364,0.42438965179803,0.850432901510698,0.595745707205312,0.522399578277871,0.47997726838022,0.22940928106717,1.14846392823004,0.430761996159075,0.646413698057667,1.33016393619462,0.504060259519861,1.33038306393183,0,0,0,0.288851619751275,0.664938581433969,0.204169356262369,0.837063261473815,0,0,0,0,0,2.14024590558481,1.31790010585369,1.46837401729345,0,0.218025156380447,1.09843091367236,1.55543919259427,0.839918529752175,2.87505128729943,2.01339127269284,0.725362142011344,0.672187598284928,0.771778308107841,1.43266719969378,1.03134418455488,0.202316460859598,0,0,1.0165335962074,0.889294796111139,0,0.988866362566974,0.7104801149461,0.898800331555214,1.53687322128622,0,0.135005938331691,0.210324961351382,0.856952953211411,0.883474163806454,0.244981598429908,0,0,3.30347642998166,2.17068474744819,1.0752457327937,0.131886287730194,0.0914876436024097,0,1.67509799400829,1.68828783009504,1.5279824777681,1.47314292736834,1.99320353118744,0.931997229126503,0.984440513331393,1.43585964202892,2.31891590961342,0,0,0,0,0,0.561777680527007,0.681721290312231,0.259786004602869,0,0.422530259330042,1.28326477414318,0,0,0.649473123033642,0.760079596425296,1.51657333504435,0.68510327831436,2.33044095282455,0.890652834388949,0.520455980298408,1.21786191324856,1.61430848079241,1.20578112442098,2.11659672844269,0.251333182659351,0.741584903203122,0.722996784599558,0.884610551949874,0.161766849947409,0.662524555381181,0.484875253135222,3.72783522436244,5.27005434620785,7.12118803165747,2.04365644166873,0.11981512450592,0,0,3.14560342750128,1.83000241127451,0.251308704225729,1.73824320192276,0.511430914660661,2.0778804455956,1.29793010454206,0.203678727700633,1.61729061793121,0.252722758433675,0.841767423545896,0.260240885925407,0,0.180062129805349,0.30140963567143,0.816437989815934,1.40925092313335,1.03071897015702,4.39795730256327,0,0.378212160335639,0,0.219195732427575,0.278047249225598,1.0447564995665,0.205782136407943,0,0,0,0,2.48550927042602,3.04883877975425,1.62055855314913,3.31442629819294,2.36117078096885,3.08534225774756,4.41814495025775,2.41446061259657,3.26942958628075,3.29119699826961,5.08919138645195,5.99909190639332,5.4093995347373,7.68425403518677,4.16039898157152,0.420579897128254,0.205809224758569,3.63460661282178,0.793351699990633,0,0.232236671860439,0,0.605050573870028,0,0.190225626112559,0.949058123089023,0.988193728344065,0.502670417600539,0.994782360205754,1.16978452271472,1.79763881730844,1.08069024937347,2.38969527905241,0,0.114248512609729,1.1270773567308,0.203651327845314,0.193952487167626,0.701358198903186,0.632365371242573,0.590440591918409,1.09899109488962,0.740382983530803,0,0,0,0,0.202860121388503,0,0,0,1.62135226775035,0,1.43768206527355,0.372140947668503,0.312037673114561,0,0.358794827043824,0.964887042726734,2.21703828199926,0.568474235311454,0.162964976442026,0,0,0.502518772325447,0.238043640886014,1.95133647857799,0.630540576424764,0.8858587585951,0.478364305972461,0.81931657357869,1.03610989119537,2.16973587872267,0,0,1.47529281905711,0.275936746304732,2.72936002979246,2.34423373184406,0.819674726883377,2.27223834483936,0,1.17131623288992,0.646270193198397,0,0.445597348164788,0.283076530788832,0.404810701674894,2.63030272120181,0.790575555893047,0.321321316421807,0.99358059645788,0.178065603667255,0.325773918707152,0.989820737835213,0,0,0,0.377210159511796,0,0,0.516856586336442,0,0,0.316036757935816,0,1.03135543248187,1.02131881726136,0,0,0.214337035031592,0.177340233642274,0.356737635204141,0.822745103010605,0.304464949114599,1.40803024838226,0.42366414172764,0.441056796109924,0.98931751764888,1.77610869365496,0.422190474497091,0.238744688006273,0.164140899745061,1.45740418314925,2.78137953015765,0.512612642393558,0.206386867963223,0.185194527369712,0.565105371014073,0.683471138605126,0.457556346413045,0.679913719975421,0.69975726161829,0.552799895217695,0,0.158167996790568,0.203319467126849,0.432021363287205,0.418176592028937,0.218362563746178,0.539457385539283,0.991841468704031,0,0.518459893167171,3.72803587852155,0.56369293868419,0.448549638131936,0,0.194451188344048,0,0.337912250981556,0.352071715937262,0.39061315453185,0.209718688851422,0,0,1.89606672376907,0,0.102710957164827,0.909445760844565,0.358053391334963,0.39736270956253,0.360586348559907,0.295379054349154,0.403865799792591,0.381034033274999,0.201652370273681,0.194915761479505,0.673482891482306,0.350630706544707,1.58711268530648,0,0,0,3.28422309854724,0.750729901804728,0.36630324853453,0,0,0.564751842617067,0.460325236507177,0,0.515559547031063,0.685082519770642,0.755393897389701,1.35004500046361,1.35096360967266,1.81256963593682,2.07104124700728,0.415149390336707,0,0.170733605754134,0.243106717068294,0,0.183843508450014,1.11123363900808,0,0.64183841918363,0.758091635291392,1.01391719956096,0,0.0936415074698824,0.448176066834085,0.459483751644906,0.952587382566147,0.347652977834566,0.192909220463705,0.412085900803307,0.735994600671987,0.342869252385415,0.70990322463735,0.238436189947321,0.290692833264657,0.564656282491984,0.676916863133412,0.548783918618318,1.57841826862706,0.407412341537585,1.12228454331548,0.593175090620871,0.689531376628944,0,0,0.578719832943424,1.49886346762768,2.10538447600868,1.28922632428979,2.29545998482612,1.10295709559758,1.62307484934295 | |phase1_expression=0.480446541314382,0,0.454999239389536,1.20985684522732,0,0.33575854382378,0.467225281191051,0.258246646883153,1.68946466582,1.17032263160997,0.856089841127525,0.239316476986009,0.513602189793617,0.174840804837995,0,0,0.699561878128147,2.05050407482854,4.38766187538364,0.42438965179803,0.850432901510698,0.595745707205312,0.522399578277871,0.47997726838022,0.22940928106717,1.14846392823004,0.430761996159075,0.646413698057667,1.33016393619462,0.504060259519861,1.33038306393183,0,0,0,0.288851619751275,0.664938581433969,0.204169356262369,0.837063261473815,0,0,0,0,0,2.14024590558481,1.31790010585369,1.46837401729345,0,0.218025156380447,1.09843091367236,1.55543919259427,0.839918529752175,2.87505128729943,2.01339127269284,0.725362142011344,0.672187598284928,0.771778308107841,1.43266719969378,1.03134418455488,0.202316460859598,0,0,1.0165335962074,0.889294796111139,0,0.988866362566974,0.7104801149461,0.898800331555214,1.53687322128622,0,0.135005938331691,0.210324961351382,0.856952953211411,0.883474163806454,0.244981598429908,0,0,3.30347642998166,2.17068474744819,1.0752457327937,0.131886287730194,0.0914876436024097,0,1.67509799400829,1.68828783009504,1.5279824777681,1.47314292736834,1.99320353118744,0.931997229126503,0.984440513331393,1.43585964202892,2.31891590961342,0,0,0,0,0,0.561777680527007,0.681721290312231,0.259786004602869,0,0.422530259330042,1.28326477414318,0,0,0.649473123033642,0.760079596425296,1.51657333504435,0.68510327831436,2.33044095282455,0.890652834388949,0.520455980298408,1.21786191324856,1.61430848079241,1.20578112442098,2.11659672844269,0.251333182659351,0.741584903203122,0.722996784599558,0.884610551949874,0.161766849947409,0.662524555381181,0.484875253135222,3.72783522436244,5.27005434620785,7.12118803165747,2.04365644166873,0.11981512450592,0,0,3.14560342750128,1.83000241127451,0.251308704225729,1.73824320192276,0.511430914660661,2.0778804455956,1.29793010454206,0.203678727700633,1.61729061793121,0.252722758433675,0.841767423545896,0.260240885925407,0,0.180062129805349,0.30140963567143,0.816437989815934,1.40925092313335,1.03071897015702,4.39795730256327,0,0.378212160335639,0,0.219195732427575,0.278047249225598,1.0447564995665,0.205782136407943,0,0,0,0,2.48550927042602,3.04883877975425,1.62055855314913,3.31442629819294,2.36117078096885,3.08534225774756,4.41814495025775,2.41446061259657,3.26942958628075,3.29119699826961,5.08919138645195,5.99909190639332,5.4093995347373,7.68425403518677,4.16039898157152,0.420579897128254,0.205809224758569,3.63460661282178,0.793351699990633,0,0.232236671860439,0,0.605050573870028,0,0.190225626112559,0.949058123089023,0.988193728344065,0.502670417600539,0.994782360205754,1.16978452271472,1.79763881730844,1.08069024937347,2.38969527905241,0,0.114248512609729,1.1270773567308,0.203651327845314,0.193952487167626,0.701358198903186,0.632365371242573,0.590440591918409,1.09899109488962,0.740382983530803,0,0,0,0,0.202860121388503,0,0,0,1.62135226775035,0,1.43768206527355,0.372140947668503,0.312037673114561,0,0.358794827043824,0.964887042726734,2.21703828199926,0.568474235311454,0.162964976442026,0,0,0.502518772325447,0.238043640886014,1.95133647857799,0.630540576424764,0.8858587585951,0.478364305972461,0.81931657357869,1.03610989119537,2.16973587872267,0,0,1.47529281905711,0.275936746304732,2.72936002979246,2.34423373184406,0.819674726883377,2.27223834483936,0,1.17131623288992,0.646270193198397,0,0.445597348164788,0.283076530788832,0.404810701674894,2.63030272120181,0.790575555893047,0.321321316421807,0.99358059645788,0.178065603667255,0.325773918707152,0.989820737835213,0,0,0,0.377210159511796,0,0,0.516856586336442,0,0,0.316036757935816,0,1.03135543248187,1.02131881726136,0,0,0.214337035031592,0.177340233642274,0.356737635204141,0.822745103010605,0.304464949114599,1.40803024838226,0.42366414172764,0.441056796109924,0.98931751764888,1.77610869365496,0.422190474497091,0.238744688006273,0.164140899745061,1.45740418314925,2.78137953015765,0.512612642393558,0.206386867963223,0.185194527369712,0.565105371014073,0.683471138605126,0.457556346413045,0.679913719975421,0.69975726161829,0.552799895217695,0,0.158167996790568,0.203319467126849,0.432021363287205,0.418176592028937,0.218362563746178,0.539457385539283,0.991841468704031,0,0.518459893167171,3.72803587852155,0.56369293868419,0.448549638131936,0,0.194451188344048,0,0.337912250981556,0.352071715937262,0.39061315453185,0.209718688851422,0,0,1.89606672376907,0,0.102710957164827,0.909445760844565,0.358053391334963,0.39736270956253,0.360586348559907,0.295379054349154,0.403865799792591,0.381034033274999,0.201652370273681,0.194915761479505,0.673482891482306,0.350630706544707,1.58711268530648,0,0,0,3.28422309854724,0.750729901804728,0.36630324853453,0,0,0.564751842617067,0.460325236507177,0,0.515559547031063,0.685082519770642,0.755393897389701,1.35004500046361,1.35096360967266,1.81256963593682,2.07104124700728,0.415149390336707,0,0.170733605754134,0.243106717068294,0,0.183843508450014,1.11123363900808,0,0.64183841918363,0.758091635291392,1.01391719956096,0,0.0936415074698824,0.448176066834085,0.459483751644906,0.952587382566147,0.347652977834566,0.192909220463705,0.412085900803307,0.735994600671987,0.342869252385415,0.70990322463735,0.238436189947321,0.290692833264657,0.564656282491984,0.676916863133412,0.548783918618318,1.57841826862706,0.407412341537585,1.12228454331548,0.593175090620871,0.689531376628944,0,0,0.578719832943424,1.49886346762768,2.10538447600868,1.28922632428979,2.29545998482612,1.10295709559758,1.62307484934295 | ||
|short_description=p5@Camk2d | |short_description=p5@Camk2d | ||
}} | }} |
Latest revision as of 13:47, 1 October 2015
Short description: | p5@Camk2d |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Camk2d_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_ENSMUST00000066452, ENSMUST00000106399, ENSMUST00000171289_5end |
EntrezGene: | Camk2d |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 4.15e-16 | 23 |
circulatory system | 4.15e-16 | 23 |
primary circulatory organ | 8.60e-15 | 18 |
heart | 8.60e-15 | 18 |
primitive heart tube | 8.60e-15 | 18 |
primary heart field | 8.60e-15 | 18 |
anterior lateral plate mesoderm | 8.60e-15 | 18 |
heart tube | 8.60e-15 | 18 |
heart primordium | 8.60e-15 | 18 |
cardiac mesoderm | 8.60e-15 | 18 |
cardiogenic plate | 8.60e-15 | 18 |
heart rudiment | 8.60e-15 | 18 |
splanchnic layer of lateral plate mesoderm | 5.70e-11 | 33 |
structure with developmental contribution from neural crest | 5.97e-11 | 92 |
compound organ | 3.58e-09 | 43 |
anatomical conduit | 5.79e-08 | 122 |
tube | 1.53e-07 | 114 |