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FFCP PHASE1:Mm9::chr3:19544452..19544466,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=381485
|EntrezGene=381485
|HGNC=
|HGNC=
|MCL_coexpression_id=45
|TSSclassifier=NA
|UniProt=G3X8Y1
|UniProt=G3X8Y1
|association_with_transcript=0bp_to_ENSMUST00000029139,NM_001081281,uc008orw.1_5end
|association_with_transcript=0bp_to_ENSMUST00000029139,NM_001081281,uc008orw.1_5end
|cluster_id=chr3:19544452..19544466,+
|description=CAGE_peak_1_at_Trim55_5end
|description=CAGE_peak_1_at_Trim55_5end
|id=chr3:19544452..19544466,+
|id=chr3:19544452..19544466,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007100!3.64e-11!18;UBERON:0000948!3.64e-11!18;UBERON:0005498!3.64e-11!18;UBERON:0004140!3.64e-11!18;UBERON:0009881!3.64e-11!18;UBERON:0004141!3.64e-11!18;UBERON:0003084!3.64e-11!18;UBERON:0007005!3.64e-11!18;UBERON:0004139!3.64e-11!18;UBERON:0004291!3.64e-11!18;UBERON:0004535!1.26e-07!23;UBERON:0001009!1.26e-07!23
|ontology_enrichment_uberon_v019_2=UBERON:0007100,6.70e-14,18;UBERON:0000948,6.70e-14,18;UBERON:0005498,6.70e-14,18;UBERON:0004140,6.70e-14,18;UBERON:0009881,6.70e-14,18;UBERON:0004141,6.70e-14,18;UBERON:0003084,6.70e-14,18;UBERON:0007005,6.70e-14,18;UBERON:0004139,6.70e-14,18;UBERON:0004291,6.70e-14,18;UBERON:0004535,1.74e-09,23;UBERON:0001009,1.74e-09,23;UBERON:0000026,4.44e-07,12;UBERON:0004708,4.44e-07,12;UBERON:0002101,4.44e-07,12;UBERON:0004357,4.44e-07,12;UBERON:0004347,4.44e-07,12;UBERON:0005732,4.44e-07,12;UBERON:0005733,4.44e-07,12;UBERON:0003102,6.99e-07,22
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06268836910977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0,0,0,0,0,0,0,0,0,0.284743361598206,0,0,0,0,0,0,0,0,0,7.5839986871146,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,1.21439728736295,2.43572382649713,1.38369298353635,1.50722640552623,1.76383060703557,0,0.247194967734374,0.144599356919912,9.73071607144862,22.3238252927425,12.367125033782,13.091631834651,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0.712875546952214,2.61254638281195,0,2.31486041475121,2.34216797332867,3.67843367093557,7.20248519221397,6.63101198477146,2.99360596265843,3.45907044769094,3.84177070694888,2.84573707812917,0.431135985865684,6.05139456537022,10.0292140773451,13.8093311429372,3.05851974148158,12.8853301613202,8.43706759272568,0,0,0,0,133.803249057934,148.220469908053,138.827849386442,153.410588659216,198.928638296625,174.7846389014,185.794621855576,147.81864417119,163.938540683506,141.686030775507,88.6504306027114,58.6127493016537,64.9127944168475,46.9837246722848,34.2226367838948,0,0,0,0,0.639864751605702,0.696710015581316,0.77320476793256,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0.913988100877831,0,3.86937522906097,0,0,0,0,0,0,0,3.50374722003798,0.393117990226406,0.224862112384854,0.202860121388503,0.482354319504834,0.25462585178142,0,0,0.549122826376163,1.43768206527355,0,1.24815069245824,0.252578877947112,0.538192240565737,0,0.554259570499814,10.0430448238357,3.91115943460862,3.05541154395339,1.40814148973101,4.02015017860358,3.80869825417622,1.95133647857799,1.41871629695572,0.44292937929755,1.43509291791738,1.47476983244164,1.03610989119537,0.433947175744535,0,0,0.491764273019036,0,0,0,0,43.6774704063565,2.52406575533005,2.34263246577983,0.215423397732799,0,0,0.566153061577665,0,0,0,0,0,0.890328018336276,0.325773918707152,0,0,0.485561272309963,0,0,0.295301892880773,0,0,0,1.06949213515416,0,0,0,0,0.720244376125241,0.258717367565509,0,0,0.356737635204141,0.164549020602121,0.304464949114599,0,1.27099242518292,0.220528398054962,1.31909002353184,6.45857706783622,4.22190474497091,1.79058516004705,1.47726809770555,0,0,0,0,0,0,0,0,0,0,0,0,0.949007980743406,0,0,0.209088296014469,0.655087691238533,0.944050424693745,1.23980183588004,1.04702376793612,0,0.621339313086926,0,0.299033092087958,0,0,0,0,0,0,0,0,4.89651010638371,0.316011120628178,0.608175645870493,1.33524244314275,1.55904987573354,0.358053391334963,1.39076948346885,0.480781798079875,0,0.504832249740738,0.15241361331,0,0.194915761479505,0.0962118416403295,0,18.1384306892169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.1136204275253,7.18244772121856,9.56108192223151,13.6139761558245,9.01336599300324,4.04455718590031,15.5572709461131,12.1560683770948,14.4413644316317,16.9307131881744,16.9831130926461,13.9583492625696,14.2335091354221,16.3264138632417,14.3014317699477,14.7651044297753,13.0949288317687,13.6965546529231,10.714233420886,15.0142898537085,15.0862471049583,13.4881612681096,15.4983523465759,16.2787986628208,14.5869539643762,13.6229518705599,17.5610853957862,14.2057644176435,13.8520196122779,11.2228454331548,12.3380418849141,12.9040871911988,13.5046244245997,15.0288735950387,15.046715656529,10.9916654292696,18.9484602840781,12.6773921888496,14.3466249051633,12.3531194706929,23.8823870689034
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06268836910977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0,0,0,0,0,0,0,0,0,0.284743361598206,0,0,0,0,0,0,0,0,0,7.5839986871146,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,1.21439728736295,2.43572382649713,1.38369298353635,1.50722640552623,1.76383060703557,0,0.247194967734374,0.144599356919912,9.73071607144862,22.3238252927425,12.367125033782,13.091631834651,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0.712875546952214,2.61254638281195,0,2.31486041475121,2.34216797332867,3.67843367093557,7.20248519221397,6.63101198477146,2.99360596265843,3.45907044769094,3.84177070694888,2.84573707812917,0.431135985865684,6.05139456537022,10.0292140773451,13.8093311429372,3.05851974148158,12.8853301613202,8.43706759272568,0,0,0,0,133.803249057934,148.220469908053,138.827849386442,153.410588659216,198.928638296625,174.7846389014,185.794621855576,147.81864417119,163.938540683506,141.686030775507,88.6504306027114,58.6127493016537,64.9127944168475,46.9837246722848,34.2226367838948,0,0,0,0,0.639864751605702,0.696710015581316,0.77320476793256,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0.913988100877831,0,3.86937522906097,0,0,0,0,0,0,0,3.50374722003798,0.393117990226406,0.224862112384854,0.202860121388503,0.482354319504834,0.25462585178142,0,0,0.549122826376163,1.43768206527355,0,1.24815069245824,0.252578877947112,0.538192240565737,0,0.554259570499814,10.0430448238357,3.91115943460862,3.05541154395339,1.40814148973101,4.02015017860358,3.80869825417622,1.95133647857799,1.41871629695572,0.44292937929755,1.43509291791738,1.47476983244164,1.03610989119537,0.433947175744535,0,0,0.491764273019036,0,0,0,0,43.6774704063565,2.52406575533005,2.34263246577983,0.215423397732799,0,0,0.566153061577665,0,0,0,0,0,0.890328018336276,0.325773918707152,0,0,0.485561272309963,0,0,0.295301892880773,0,0,0,1.06949213515416,0,0,0,0,0.720244376125241,0.258717367565509,0,0,0.356737635204141,0.164549020602121,0.304464949114599,0,1.27099242518292,0.220528398054962,1.31909002353184,6.45857706783622,4.22190474497091,1.79058516004705,1.47726809770555,0,0,0,0,0,0,0,0,0,0,0,0,0.949007980743406,0,0,0.209088296014469,0.655087691238533,0.944050424693745,1.23980183588004,1.04702376793612,0,0.621339313086926,0,0.299033092087958,0,0,0,0,0,0,0,0,4.89651010638371,0.316011120628178,0.608175645870493,1.33524244314275,1.55904987573354,0.358053391334963,1.39076948346885,0.480781798079875,0,0.504832249740738,0.15241361331,0,0.194915761479505,0.0962118416403295,0,18.1384306892169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.1136204275253,7.18244772121856,9.56108192223151,13.6139761558245,9.01336599300324,4.04455718590031,15.5572709461131,12.1560683770948,14.4413644316317,16.9307131881744,16.9831130926461,13.9583492625696,14.2335091354221,16.3264138632417,14.3014317699477,14.7651044297753,13.0949288317687,13.6965546529231,10.714233420886,15.0142898537085,15.0862471049583,13.4881612681096,15.4983523465759,16.2787986628208,14.5869539643762,13.6229518705599,17.5610853957862,14.2057644176435,13.8520196122779,11.2228454331548,12.3380418849141,12.9040871911988,13.5046244245997,15.0288735950387,15.046715656529,10.9916654292696,18.9484602840781,12.6773921888496,14.3466249051633,12.3531194706929,23.8823870689034
|short_description=p1@Trim55
|short_description=p1@Trim55
}}
}}

Latest revision as of 21:01, 1 October 2015

Short description:p1@Trim55
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Trim55_5end
Coexpression cluster:MCL_coexpression_mm9:45
Association with transcript: 0bp_to_ENSMUST00000029139, NM_001081281, uc008orw.1_5end
EntrezGene:Trim55
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Trim55

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.58
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F51.51
adrenal gland, neonate N00.CNhs11191.1311-23C11.76
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G29.73
bone (os femoris), neonate N02.CNhs11227.1985-43F522.32
bone (os femoris), neonate N16.CNhs11225.1525-43A612.37
bone (os femoris), neonate N20.CNhs11195.1350-25C313.09
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.61
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G42.31
eyeball, embryo E12.CNhs11016.345-16C62.34
eyeball, embryo E14.CNhs10521.399-16E23.68
eyeball, embryo E15.CNhs10593.426-16C97.20
eyeball, embryo E17.CNhs11023.1261-18D46.63
eyeball, neonate N00.CNhs11207.633-15C62.99
eyeball, neonate N01.CNhs11140.1532-43E73.46
eyeball, neonate N02.CNhs11205.1551-44G83.84
eyeball, neonate N16.CNhs11188.777-19A22.85
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H26.05
forelimb, embryo E13.CNhs10589.384-1E210.03
forelimb, embryo E14.CNhs10577.413-26A813.81
forelimb, embryo E15.CNhs11007.437-20E73.06
forelimb, embryo E17.CNhs10598.1517-43C412.89
forelimb, embryo E18.CNhs11008.1520-43B58.44
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E9133.80
heart, embryo E12.CNhs11015.353-12F5148.22
heart, embryo E13.CNhs11013.376-3I9138.83
heart, embryo E14.CNhs10597.403-26D4153.41
heart, embryo E15.CNhs11017.431-16C8198.93
heart, embryo E16.CNhs11021.457-17C6174.78
heart, embryo E17.CNhs11025.479-18E5185.79
heart, embryo E18.CNhs11030.1283-20G3147.82
heart, neonate N00.CNhs11213.639-21E3163.94
heart, neonate N03.CNhs11221.1349-25I2141.69
heart, neonate N10.CNhs11118.749-24G188.65
heart, neonate N16.CNhs11209.782-15G158.61
heart, neonate N20.CNhs11127.821-26I664.91
heart, neonate N25.CNhs11196.1351-25D346.98
heart, neonate N30.CNhs11202.1390-42D234.22
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I23.87
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F83.50
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.48
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G210.04
lung, embryo E14.CNhs10604.404-26F83.91
lung, embryo E15.CNhs11020.432-17C53.06
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A64.02
lung, embryo E18.CNhs10583.1287-20I63.81
lung, neonate N00.CNhs11224.640-42C61.95
lung, neonate N06.CNhs11212.683-20E51.42
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E61.44
lung, neonate N20.CNhs11109.822-18A41.47
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C243.68
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.89
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G31.27
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G46.46
skin, neonate N03.CNhs11215.662-22H34.22
skin, neonate N06.CNhs11097.693-20I51.79
skin, neonate N10.CNhs11108.762-6C41.48
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.95
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.66
stomach, neonate N03.CNhs11193.1340-24B80.94
stomach, neonate N07.CNhs11210.718-18A91.24
stomach, neonate N25.CNhs11104.1355-25E41.05
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E24.90
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I21.34
thymus, embryo E16.CNhs11002.456-26C51.56
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G41.39
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B418.14
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I83.11
whole body, embryo E12.CNhs10587.857-27C97.18
whole body, embryo E13.CNhs10512.372-23H29.56
whole body, embryo E14.5.CNhs10578.420-27D213.61
whole body, embryo E14.CNhs10519.395-14B19.01
whole body, embryo E16.CNhs10514.453-14F24.04
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G515.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G512.16
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G514.44
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G516.93
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G516.98
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G513.96
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G514.23
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G516.33
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G514.30
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G514.77
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G513.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G513.70
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G510.71
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G515.01
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G515.09
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G513.49
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G515.50
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G516.28
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G514.59
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G513.62
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G517.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G514.21
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G513.85
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G511.22
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G512.34
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G512.90
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G513.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G515.03
whole body, embryo E17.5.CNhs10513.490-9F915.05
whole body, embryo E17.CNhs10517.475-3I510.99
whole body, embryo E18.CNhs10516.493-3B318.95
whole body, neonate N00.CNhs10525.657-19C212.68
whole body, neonate N01.CNhs10576.659-23C614.35
whole body, neonate N06.CNhs10515.692-21D112.35
whole body, neonate N10.CNhs10518.761-6B423.88





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
primary circulatory organ6.70e-1418
heart6.70e-1418
primitive heart tube6.70e-1418
primary heart field6.70e-1418
anterior lateral plate mesoderm6.70e-1418
heart tube6.70e-1418
heart primordium6.70e-1418
cardiac mesoderm6.70e-1418
cardiogenic plate6.70e-1418
heart rudiment6.70e-1418
cardiovascular system1.74e-0923
circulatory system1.74e-0923
appendage4.44e-0712
paired limb/fin4.44e-0712
limb4.44e-0712
paired limb/fin bud4.44e-0712
limb bud4.44e-0712
limb/fin field4.44e-0712
limb field4.44e-0712
surface structure6.99e-0722
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