FFCP PHASE1:Mm9::chr4:126434227..126434248,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=44 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:126434227..126434248,+ | |||
|description=CAGE_peak_at_chr4:126434227..126434248,+ | |description=CAGE_peak_at_chr4:126434227..126434248,+ | ||
|id=chr4:126434227..126434248,+ | |id=chr4:126434227..126434248,+ | ||
|ontology_enrichment_celltype=CL:0002563!1.22e-08!9;CL:0002251!1.22e-08!9 | |ontology_enrichment_celltype=CL:0002563!1.22e-08!9;CL:0002251!1.22e-08!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.41e-14,9;CL:0002251,1.41e-14,9;CL:0000239,4.97e-12,6;CL:0000677,4.97e-12,6;CL:0000584,4.97e-12,6;CL:0000075,2.92e-10,7;CL:0000066,1.10e-09,25;CL:0000682,1.12e-09,3;CL:0002076,2.39e-08,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!5.61e-14!15;UBERON:0001242!4.85e-12!13;UBERON:0000060!4.85e-12!13;UBERON:0001262!4.85e-12!13;UBERON:0004786!4.85e-12!13;UBERON:0000160!5.12e-12!43;UBERON:0005409!5.82e-11!59;UBERON:0003350!1.22e-08!9;UBERON:0004808!1.22e-08!9;UBERON:0001277!1.22e-08!9;UBERON:0004923!3.34e-08!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.03e-29,15;UBERON:0000160,2.90e-28,31;UBERON:0001242,3.38e-24,13;UBERON:0001262,3.38e-24,13;UBERON:0004786,3.38e-24,13;UBERON:0004923,1.65e-17,24;UBERON:0005409,3.33e-17,47;UBERON:0003350,1.41e-14,9;UBERON:0004808,1.41e-14,9;UBERON:0001277,1.41e-14,9;UBERON:0000485,9.54e-12,11;UBERON:0002108,3.83e-11,4;UBERON:0001007,7.99e-11,116;UBERON:0001555,7.99e-11,116;UBERON:0007026,7.99e-11,116;UBERON:0004119,1.51e-10,118;UBERON:0000925,1.51e-10,118;UBERON:0006595,1.51e-10,118;UBERON:0002465,2.78e-09,3;UBERON:0000331,8.11e-09,3;UBERON:0002116,8.11e-09,3;UBERON:0001204,8.11e-09,3;UBERON:0001168,8.11e-09,3;UBERON:0004921,8.26e-09,114;UBERON:0010147,2.46e-07,2;UBERON:0003937,2.46e-07,2;UBERON:0005399,2.46e-07,2;UBERON:0001962,3.22e-07,2;UBERON:0001961,3.22e-07,2;UBERON:0001744,3.22e-07,2 | |||
|phase1_expression=0,9.42233600626275,8.18998630901165,1.51232105653415,0.500895729946347,6.04365378882803,5.13947809310157,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,11.9994317095055,8.94696196161963,5.7423196411502,7.75371593086335,9.26526300549323,2.47030445293286,2.77233142735924,4.21287970245079,0,0,0,1.44425809875637,0.664938581433969,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0.285650984403804,0,0.122490799214954,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0.294628585473668,0,0.186399445825301,0,0,0.869593466105033,0,0,0,0,0,0.421333260395256,0.170430322578058,0,0,0,0,0,0,0,0,0,1.37020655662872,1.29468941823586,0,0,0.608930956624282,0.230615497256059,0.150722640552623,0.117588707135705,0,0,0.578397427679647,0,0,0.220841518460394,0.484875253135222,0,0.878342391034642,0.628340120440365,5.62005521458901,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0.373220911830279,0.758168275301024,0.420883711772948,0,0,0.180062129805349,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0.210289948564127,0.102904612379284,6.27795687669216,5.55346189993443,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0.190225626112559,2.84717436926707,0.329397909448022,0.754005626400808,1.39269530428806,0.58489226135736,3.59527763461689,4.53889904736858,1.1948476395262,0,0,0,0.203651327845314,0,0.0701358198903186,0.189709611372772,0.590440591918409,0.470996183524124,0.246794327843601,0,0,0,0,0,0,0,0,0,0,1.43768206527355,1.11642284300551,1.5601883655728,1.26289438973556,0.717589654087649,0.482443521363367,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.289298117163023,0,0,0.983528546038072,0.551873492609465,0.160550589987792,0.117211686592203,0,0.252470927204373,0,0,0,0,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,0,0.425820255624806,0.178065603667255,0,0,1.32745138339963,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0.680879211507576,0,0,0,0.177340233642274,0.178368817602071,0.493647061806363,0,0,0,10.8058915046931,0.32977250588296,0,0.0603129249281559,0,0,1.7488850197791,0,0,0,0,0.188368457004691,0,0.228778173206523,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0,0.247960367176008,0.26175594198403,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15241361331,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0.375364950902364,0,0,137.43075650569,0.564751842617067,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0,0,0,0,0.256100609619477,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0,0.237270036248348,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,9.42233600626275,8.18998630901165,1.51232105653415,0.500895729946347,6.04365378882803,5.13947809310157,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,11.9994317095055,8.94696196161963,5.7423196411502,7.75371593086335,9.26526300549323,2.47030445293286,2.77233142735924,4.21287970245079,0,0,0,1.44425809875637,0.664938581433969,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0.299600110518405,0.384218305321555,0,0,0,0.285650984403804,0,0.122490799214954,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0.294628585473668,0,0.186399445825301,0,0,0.869593466105033,0,0,0,0,0,0.421333260395256,0.170430322578058,0,0,0,0,0,0,0,0,0,1.37020655662872,1.29468941823586,0,0,0.608930956624282,0.230615497256059,0.150722640552623,0.117588707135705,0,0,0.578397427679647,0,0,0.220841518460394,0.484875253135222,0,0.878342391034642,0.628340120440365,5.62005521458901,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0.373220911830279,0.758168275301024,0.420883711772948,0,0,0.180062129805349,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0.210289948564127,0.102904612379284,6.27795687669216,5.55346189993443,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0.190225626112559,2.84717436926707,0.329397909448022,0.754005626400808,1.39269530428806,0.58489226135736,3.59527763461689,4.53889904736858,1.1948476395262,0,0,0,0.203651327845314,0,0.0701358198903186,0.189709611372772,0.590440591918409,0.470996183524124,0.246794327843601,0,0,0,0,0,0,0,0,0,0,1.43768206527355,1.11642284300551,1.5601883655728,1.26289438973556,0.717589654087649,0.482443521363367,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0.289298117163023,0,0,0.983528546038072,0.551873492609465,0.160550589987792,0.117211686592203,0,0.252470927204373,0,0,0,0,0.222798674082394,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,0,0.425820255624806,0.178065603667255,0,0,1.32745138339963,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0.680879211507576,0,0,0,0.177340233642274,0.178368817602071,0.493647061806363,0,0,0,10.8058915046931,0.32977250588296,0,0.0603129249281559,0,0,1.7488850197791,0,0,0,0,0.188368457004691,0,0.228778173206523,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0,0.247960367176008,0.26175594198403,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15241361331,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,0,0.375364950902364,0,0,137.43075650569,0.564751842617067,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0.222246727801615,0.206035057238894,0.320919209591815,0,0,0,0,0.256100609619477,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0,0,0,0,0,0.0846146078916765,0,0,0.135804113845862,0,0.237270036248348,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:126434227..126434248,+ | |short_description=p@chr4:126434227..126434248,+ | ||
}} | }} |
Latest revision as of 18:30, 4 August 2015
Short description: | p@chr4:126434227..126434248, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:126434227..126434248, + |
Coexpression cluster: | MCL_coexpression_mm9:44 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.41e-14 | 9 |
epithelial cell of alimentary canal | 1.41e-14 | 9 |
brush border epithelial cell | 4.97e-12 | 6 |
gut absorptive cell | 4.97e-12 | 6 |
enterocyte | 4.97e-12 | 6 |
columnar/cuboidal epithelial cell | 2.92e-10 | 7 |
epithelial cell | 1.10e-09 | 25 |
M cell of gut | 1.12e-09 | 3 |
endo-epithelial cell | 2.39e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.03e-29 | 15 |
intestine | 2.90e-28 | 31 |
intestinal mucosa | 3.38e-24 | 13 |
wall of intestine | 3.38e-24 | 13 |
gastrointestinal system mucosa | 3.38e-24 | 13 |
organ component layer | 1.65e-17 | 24 |
gastrointestinal system | 3.33e-17 | 47 |
epithelium of mucosa | 1.41e-14 | 9 |
gastrointestinal system epithelium | 1.41e-14 | 9 |
intestinal epithelium | 1.41e-14 | 9 |
simple columnar epithelium | 9.54e-12 | 11 |
small intestine | 3.83e-11 | 4 |
digestive system | 7.99e-11 | 116 |
digestive tract | 7.99e-11 | 116 |
primitive gut | 7.99e-11 | 116 |
endoderm-derived structure | 1.51e-10 | 118 |
endoderm | 1.51e-10 | 118 |
presumptive endoderm | 1.51e-10 | 118 |
lymphoid system | 2.78e-09 | 3 |
ileal mucosa | 8.11e-09 | 3 |
ileum | 8.11e-09 | 3 |
mucosa of small intestine | 8.11e-09 | 3 |
wall of small intestine | 8.11e-09 | 3 |
subdivision of digestive tract | 8.26e-09 | 114 |
male accessory sex gland | 2.46e-07 | 2 |
sex gland | 2.46e-07 | 2 |
male reproductive gland | 2.46e-07 | 2 |
gut-associated lymphoid tissue | 3.22e-07 | 2 |
mucosa-associated lymphoid tissue | 3.22e-07 | 2 |
lymphoid tissue | 3.22e-07 | 2 |