FFCP PHASE1:Mm9::chr6:97202741..97202759,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=320502 | |EntrezGene=320502 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=35 | |||
|TSSclassifier=NA | |||
|UniProt=E9QA62,A0JP45 | |UniProt=E9QA62,A0JP45 | ||
|association_with_transcript=14bp_to_ENSMUST00000095655,NM_001081157,uc009das.1_5end | |association_with_transcript=14bp_to_ENSMUST00000095655,NM_001081157,uc009das.1_5end | ||
|cluster_id=chr6:97202741..97202759,- | |||
|description=CAGE_peak_1_at_Lmod3_5end | |description=CAGE_peak_1_at_Lmod3_5end | ||
|id=chr6:97202741..97202759,- | |id=chr6:97202741..97202759,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!1.60e-09!23;UBERON:0007100!5.70e-08!18;UBERON:0000948!5.70e-08!18;UBERON:0005498!5.70e-08!18;UBERON:0004140!5.70e-08!18;UBERON:0009881!5.70e-08!18;UBERON:0004141!5.70e-08!18;UBERON:0003084!5.70e-08!18;UBERON:0007005!5.70e-08!18;UBERON:0004139!5.70e-08!18;UBERON:0004291!5.70e-08!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.96e-10,18;UBERON:0000948,1.96e-10,18;UBERON:0005498,1.96e-10,18;UBERON:0004140,1.96e-10,18;UBERON:0009881,1.96e-10,18;UBERON:0004141,1.96e-10,18;UBERON:0003084,1.96e-10,18;UBERON:0007005,1.96e-10,18;UBERON:0004139,1.96e-10,18;UBERON:0004291,1.96e-10,18;UBERON:0003102,9.52e-10,22;UBERON:0004535,6.32e-08,23;UBERON:0001009,6.32e-08,23;UBERON:0000026,7.86e-08,12;UBERON:0004708,7.86e-08,12;UBERON:0002101,7.86e-08,12;UBERON:0004357,7.86e-08,12;UBERON:0004347,7.86e-08,12;UBERON:0005732,7.86e-08,12;UBERON:0005733,7.86e-08,12;UBERON:0010707,5.46e-07,13 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284743361598206,0,0.075726193333184,0,0,0,0.679971333707751,0.539703191637817,0,0,28.9315505471409,0,0,0,0,0,0,0,0,0,0,2.51204535381932,0,0,1.04091196059682,0,0.922461989024234,0.60289056221049,1.29347577849275,0.251333182659351,0,1.15679485535929,11.4999371753484,55.9713300818036,34.0095938429006,23.7588874036259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305518091550949,10.4501855312478,0,2.73574412652416,1.04096354370163,1.14951052216736,2.34080768746954,4.9732589885786,3.12967896096108,4.86832137082429,2.71735001223214,5.43277078551933,0.646703978798527,5.10586416453112,3.34307135911503,7.89104636739269,4.17070873838397,15.3230953269753,6.37924622864625,0,0,0,0,6.00664740352955,7.97388603935727,11.1638478105829,13.7311946639422,12.5929108318338,13.5755059340893,19.5328513590343,17.9743178937745,15.179494507732,12.341988743511,32.9976602798981,33.0760742947091,34.5031970323784,35.3475685618592,25.3650131457103,0,0,0,0,0.426576501070468,0,0.902072229254653,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0.189667900953082,1.48523066392647,0,1.01825663922657,0,0,0.189709611372772,0,0,0,0,0.333690211432188,0.589676985339609,0.224862112384854,0,0.482354319504834,0,0,0.162135226775035,0.274561413188081,12.9391385874619,1.11642284300551,1.24815069245824,0,3.04975602987251,0,0.554259570499814,0.37898282354097,1.30371981153621,0,0,0.502518772325447,0.476087281772027,0.585400943573396,2.04925687338048,1.55025282754142,0.318909537314974,3.11340297959902,2.93564469172023,0.289298117163023,0,0,0,0.275936746304732,0,0.117211686592203,0,79.5283420693775,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.890328018336276,0.488660878060728,0,0,0,0,0,0.295301892880773,0,0.258428293168221,0,4.27796854061666,0,0,0,0,0.18006109403131,0,0,0.354680467284547,0,0,0,0,0.21183207086382,1.32317038832977,35.4505443824182,17.5996225098537,11.0975781867807,4.17803204010978,4.43180429311665,0,1.48340241608408,0,0.206386867963223,0.185194527369712,0.188368457004691,0,0,0,0,0,2.86401185404534,0,0.203319467126849,0,0,0.218362563746178,0.134864346384821,0.495920734352016,3.14107130380836,0,0.621339313086926,0,0,0,0,0,0,0,0.13020438484395,0,0,6.91272015018877,0,0.202725215290164,0.616265742988964,0.25984164595559,0.716106782669926,1.58945083825012,0.721172697119813,0.295379054349154,0.605798699688886,0,0,0.0974578807397524,0.192423683280659,0.116876902181569,49.8806843953465,0,0,0,0.19318959403219,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0.51776031175182,1.14166082342594,5.98537310101547,4.60980735536162,10.6966955510049,4.82110274044359,2.75765262675021,25.7806204249874,21.2216108956061,25.3526175577534,22.2373546352142,24.8409713892435,26.0304351112785,25.470490031808,22.2807530368945,22.5147038306004,18.0991602687568,17.7303018695629,22.7632880147172,19.7801232385587,32.8253591899706,26.7438016860624,24.6691370561479,25.274236134416,26.7437406603484,28.4210328854298,23.8613194254528,20.122077016005,33.9359927754817,26.2101939722513,36.474247657753,21.4729382804755,21.4739771578728,21.2800142448238,21.2263472424773,16.5899685443782,8.74337022782811,22.4574344107592,24.0655580534094,41.1269913948013,33.3093042870468,63.2999191243751 | |phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03134418455488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284743361598206,0,0.075726193333184,0,0,0,0.679971333707751,0.539703191637817,0,0,28.9315505471409,0,0,0,0,0,0,0,0,0,0,2.51204535381932,0,0,1.04091196059682,0,0.922461989024234,0.60289056221049,1.29347577849275,0.251333182659351,0,1.15679485535929,11.4999371753484,55.9713300818036,34.0095938429006,23.7588874036259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305518091550949,10.4501855312478,0,2.73574412652416,1.04096354370163,1.14951052216736,2.34080768746954,4.9732589885786,3.12967896096108,4.86832137082429,2.71735001223214,5.43277078551933,0.646703978798527,5.10586416453112,3.34307135911503,7.89104636739269,4.17070873838397,15.3230953269753,6.37924622864625,0,0,0,0,6.00664740352955,7.97388603935727,11.1638478105829,13.7311946639422,12.5929108318338,13.5755059340893,19.5328513590343,17.9743178937745,15.179494507732,12.341988743511,32.9976602798981,33.0760742947091,34.5031970323784,35.3475685618592,25.3650131457103,0,0,0,0,0.426576501070468,0,0.902072229254653,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0.189667900953082,1.48523066392647,0,1.01825663922657,0,0,0.189709611372772,0,0,0,0,0.333690211432188,0.589676985339609,0.224862112384854,0,0.482354319504834,0,0,0.162135226775035,0.274561413188081,12.9391385874619,1.11642284300551,1.24815069245824,0,3.04975602987251,0,0.554259570499814,0.37898282354097,1.30371981153621,0,0,0.502518772325447,0.476087281772027,0.585400943573396,2.04925687338048,1.55025282754142,0.318909537314974,3.11340297959902,2.93564469172023,0.289298117163023,0,0,0,0.275936746304732,0,0.117211686592203,0,79.5283420693775,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.890328018336276,0.488660878060728,0,0,0,0,0,0.295301892880773,0,0.258428293168221,0,4.27796854061666,0,0,0,0,0.18006109403131,0,0,0.354680467284547,0,0,0,0,0.21183207086382,1.32317038832977,35.4505443824182,17.5996225098537,11.0975781867807,4.17803204010978,4.43180429311665,0,1.48340241608408,0,0.206386867963223,0.185194527369712,0.188368457004691,0,0,0,0,0,2.86401185404534,0,0.203319467126849,0,0,0.218362563746178,0.134864346384821,0.495920734352016,3.14107130380836,0,0.621339313086926,0,0,0,0,0,0,0,0.13020438484395,0,0,6.91272015018877,0,0.202725215290164,0.616265742988964,0.25984164595559,0.716106782669926,1.58945083825012,0.721172697119813,0.295379054349154,0.605798699688886,0,0,0.0974578807397524,0.192423683280659,0.116876902181569,49.8806843953465,0,0,0,0.19318959403219,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0.51776031175182,1.14166082342594,5.98537310101547,4.60980735536162,10.6966955510049,4.82110274044359,2.75765262675021,25.7806204249874,21.2216108956061,25.3526175577534,22.2373546352142,24.8409713892435,26.0304351112785,25.470490031808,22.2807530368945,22.5147038306004,18.0991602687568,17.7303018695629,22.7632880147172,19.7801232385587,32.8253591899706,26.7438016860624,24.6691370561479,25.274236134416,26.7437406603484,28.4210328854298,23.8613194254528,20.122077016005,33.9359927754817,26.2101939722513,36.474247657753,21.4729382804755,21.4739771578728,21.2800142448238,21.2263472424773,16.5899685443782,8.74337022782811,22.4574344107592,24.0655580534094,41.1269913948013,33.3093042870468,63.2999191243751 | ||
|short_description=p1@Lmod3 | |short_description=p1@Lmod3 | ||
}} | }} |
Latest revision as of 23:17, 1 October 2015
Short description: | p1@Lmod3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Lmod3_5end |
Coexpression cluster: | MCL_coexpression_mm9:35 |
Association with transcript: | 14bp_to_ENSMUST00000095655, NM_001081157, uc009das.1_5end |
EntrezGene: | Lmod3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.96e-10 | 18 |
heart | 1.96e-10 | 18 |
primitive heart tube | 1.96e-10 | 18 |
primary heart field | 1.96e-10 | 18 |
anterior lateral plate mesoderm | 1.96e-10 | 18 |
heart tube | 1.96e-10 | 18 |
heart primordium | 1.96e-10 | 18 |
cardiac mesoderm | 1.96e-10 | 18 |
cardiogenic plate | 1.96e-10 | 18 |
heart rudiment | 1.96e-10 | 18 |
surface structure | 9.52e-10 | 22 |
cardiovascular system | 6.32e-08 | 23 |
circulatory system | 6.32e-08 | 23 |
appendage | 7.86e-08 | 12 |
paired limb/fin | 7.86e-08 | 12 |
limb | 7.86e-08 | 12 |
paired limb/fin bud | 7.86e-08 | 12 |
limb bud | 7.86e-08 | 12 |
limb/fin field | 7.86e-08 | 12 |
limb field | 7.86e-08 | 12 |
appendage girdle complex | 5.46e-07 | 13 |