FFCP PHASE1:Mm9::chr15:79113964..79114012,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:79113964..79114012,- | |||
|description=CAGE_peak_at_chr15:79113964..79114012,- | |description=CAGE_peak_at_chr15:79113964..79114012,- | ||
|id=chr15:79113964..79114012,- | |id=chr15:79113964..79114012,- | ||
|ontology_enrichment_celltype=CL:0002563!8.16e-17!9;CL:0002251!8.16e-17!9;CL:0000239!1.56e-12!6;CL:0000677!1.56e-12!6;CL:0000212!1.56e-12!6;CL:0000584!1.56e-12!6;CL:0000075!1.35e-10!7;CL:0002076!2.81e-09!15;CL:0000066!5.28e-09!25;CL:0000473!8.91e-07!3;CL:0000627!8.91e-07!3;CL:0000682!8.91e-07!3 | |ontology_enrichment_celltype=CL:0002563!8.16e-17!9;CL:0002251!8.16e-17!9;CL:0000239!1.56e-12!6;CL:0000677!1.56e-12!6;CL:0000212!1.56e-12!6;CL:0000584!1.56e-12!6;CL:0000075!1.35e-10!7;CL:0002076!2.81e-09!15;CL:0000066!5.28e-09!25;CL:0000473!8.91e-07!3;CL:0000627!8.91e-07!3;CL:0000682!8.91e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.38e-21,9;CL:0002251,1.38e-21,9;CL:0000239,1.36e-19,6;CL:0000677,1.36e-19,6;CL:0000584,1.36e-19,6;CL:0000075,1.05e-16,7;CL:0000066,2.21e-13,25;CL:0002076,1.86e-12,15;CL:0000682,3.83e-10,3;CL:0000223,4.95e-09,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.65e-39!43;UBERON:0005409!7.85e-32!59;UBERON:0000344!2.93e-27!15;UBERON:0001242!7.69e-24!13;UBERON:0000060!7.69e-24!13;UBERON:0001262!7.69e-24!13;UBERON:0004786!7.69e-24!13;UBERON:0003350!8.16e-17!9;UBERON:0004808!8.16e-17!9;UBERON:0001277!8.16e-17!9;UBERON:0004923!1.77e-15!24;UBERON:0000485!2.21e-13!11;UBERON:0001007!1.02e-11!128;UBERON:0001555!1.02e-11!128;UBERON:0007026!1.02e-11!128;UBERON:0004119!2.13e-11!130;UBERON:0000925!2.13e-11!130;UBERON:0006595!2.13e-11!130;UBERON:0004921!3.93e-10!126;UBERON:0004185!3.93e-10!126 | |ontology_enrichment_uberon=UBERON:0000160!2.65e-39!43;UBERON:0005409!7.85e-32!59;UBERON:0000344!2.93e-27!15;UBERON:0001242!7.69e-24!13;UBERON:0000060!7.69e-24!13;UBERON:0001262!7.69e-24!13;UBERON:0004786!7.69e-24!13;UBERON:0003350!8.16e-17!9;UBERON:0004808!8.16e-17!9;UBERON:0001277!8.16e-17!9;UBERON:0004923!1.77e-15!24;UBERON:0000485!2.21e-13!11;UBERON:0001007!1.02e-11!128;UBERON:0001555!1.02e-11!128;UBERON:0007026!1.02e-11!128;UBERON:0004119!2.13e-11!130;UBERON:0000925!2.13e-11!130;UBERON:0006595!2.13e-11!130;UBERON:0004921!3.93e-10!126;UBERON:0004185!3.93e-10!126 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.49e-54,31;UBERON:0000344,1.19e-38,15;UBERON:0005409,4.52e-34,47;UBERON:0001242,4.85e-33,13;UBERON:0001262,4.85e-33,13;UBERON:0004786,4.85e-33,13;UBERON:0004923,4.37e-23,24;UBERON:0003350,1.38e-21,9;UBERON:0004808,1.38e-21,9;UBERON:0001277,1.38e-21,9;UBERON:0000485,1.94e-17,11;UBERON:0001007,1.49e-13,116;UBERON:0001555,1.49e-13,116;UBERON:0007026,1.49e-13,116;UBERON:0004119,3.07e-13,118;UBERON:0000925,3.07e-13,118;UBERON:0006595,3.07e-13,118;UBERON:0002108,1.09e-12,4;UBERON:0004921,2.69e-11,114;UBERON:0000331,4.74e-10,3;UBERON:0002116,4.74e-10,3;UBERON:0001204,4.74e-10,3;UBERON:0001168,4.74e-10,3;UBERON:0001155,2.09e-07,2;UBERON:0000059,2.09e-07,2;UBERON:0001962,4.60e-07,2;UBERON:0001961,4.60e-07,2;UBERON:0001744,4.60e-07,2 | |||
|phase1_expression=0,9.77131141390211,9.55498402718026,14.5182821427278,12.5223932486587,3.52546471014969,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.43974237497583,2.98232065387321,4.59385571292016,5.1691439539089,6.03319451520489,8.7410772949932,5.79669298447841,1.77384408524244,0,0,0,1.1554064790051,0.498703936075477,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,3.72783522436244,0,0,8.17462576667492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.94753809370836,3.96675849995316,0,0,0.644337306610467,0.605050573870028,0.667134131534611,0.951128130562796,6.16887780007865,1.15289268306808,2.76468729680296,2.18852119245266,2.14460495831032,6.29173586057955,5.83572734661674,6.37252074413975,0,0,0,0,0,0,0,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0.295301892880773,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.49777003955821,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0.0826534557253359,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,9.77131141390211,9.55498402718026,14.5182821427278,12.5223932486587,3.52546471014969,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.43974237497583,2.98232065387321,4.59385571292016,5.1691439539089,6.03319451520489,8.7410772949932,5.79669298447841,1.77384408524244,0,0,0,1.1554064790051,0.498703936075477,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,3.72783522436244,0,0,8.17462576667492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.94753809370836,3.96675849995316,0,0,0.644337306610467,0.605050573870028,0.667134131534611,0.951128130562796,6.16887780007865,1.15289268306808,2.76468729680296,2.18852119245266,2.14460495831032,6.29173586057955,5.83572734661674,6.37252074413975,0,0,0,0,0,0,0,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0.295301892880773,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.49777003955821,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0.0826534557253359,0,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr15:79113964..79114012,- | |short_description=p@chr15:79113964..79114012,- | ||
}} | }} |
Latest revision as of 15:15, 5 August 2015
Short description: | p@chr15:79113964..79114012, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:79113964..79114012, - |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.38e-21 | 9 |
epithelial cell of alimentary canal | 1.38e-21 | 9 |
brush border epithelial cell | 1.36e-19 | 6 |
gut absorptive cell | 1.36e-19 | 6 |
enterocyte | 1.36e-19 | 6 |
columnar/cuboidal epithelial cell | 1.05e-16 | 7 |
epithelial cell | 2.21e-13 | 25 |
endo-epithelial cell | 1.86e-12 | 15 |
M cell of gut | 3.83e-10 | 3 |
endodermal cell | 4.95e-09 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.49e-54 | 31 |
mucosa | 1.19e-38 | 15 |
gastrointestinal system | 4.52e-34 | 47 |
intestinal mucosa | 4.85e-33 | 13 |
wall of intestine | 4.85e-33 | 13 |
gastrointestinal system mucosa | 4.85e-33 | 13 |
organ component layer | 4.37e-23 | 24 |
epithelium of mucosa | 1.38e-21 | 9 |
gastrointestinal system epithelium | 1.38e-21 | 9 |
intestinal epithelium | 1.38e-21 | 9 |
simple columnar epithelium | 1.94e-17 | 11 |
digestive system | 1.49e-13 | 116 |
digestive tract | 1.49e-13 | 116 |
primitive gut | 1.49e-13 | 116 |
endoderm-derived structure | 3.07e-13 | 118 |
endoderm | 3.07e-13 | 118 |
presumptive endoderm | 3.07e-13 | 118 |
small intestine | 1.09e-12 | 4 |
subdivision of digestive tract | 2.69e-11 | 114 |
ileal mucosa | 4.74e-10 | 3 |
ileum | 4.74e-10 | 3 |
mucosa of small intestine | 4.74e-10 | 3 |
wall of small intestine | 4.74e-10 | 3 |
colon | 2.09e-07 | 2 |
large intestine | 2.09e-07 | 2 |
gut-associated lymphoid tissue | 4.60e-07 | 2 |
mucosa-associated lymphoid tissue | 4.60e-07 | 2 |
lymphoid tissue | 4.60e-07 | 2 |