FFCP PHASE1:Mm9::chr7:67121440..67121451,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=438 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:67121440..67121451,- | |||
|description=CAGE_peak_at_chr7:67121440..67121451,- | |description=CAGE_peak_at_chr7:67121440..67121451,- | ||
|id=chr7:67121440..67121451,- | |id=chr7:67121440..67121451,- | ||
|ontology_enrichment_celltype=CL:0000117!2.63e-38!23;CL:0000337!2.63e-38!23;CL:0000540!1.19e-25!33;CL:0000047!1.19e-25!33;CL:0000031!1.19e-25!33;CL:0000404!1.19e-25!33;CL:0002319!3.11e-21!43;CL:0000393!3.61e-21!39;CL:0000211!3.61e-21!39;CL:0000221!1.15e-20!44;CL:0000133!1.15e-20!44;CL:0000055!9.55e-18!50;CL:0002609!6.98e-13!6;CL:0002321!1.27e-11!70;CL:0000220!1.27e-11!70;CL:0002610!1.93e-11!3;CL:0002612!3.32e-11!3;CL:0000723!4.38e-07!91;CL:0000048!4.38e-07!91 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,2.47e-52,3;CL:0002612,2.99e-24,3;CL:0000117,1.61e-19,23;CL:0000337,1.61e-19,23;CL:0000540,8.03e-14,33;CL:0000047,8.03e-14,33;CL:0000031,8.03e-14,33;CL:0000404,8.03e-14,33;CL:0000393,8.52e-12,39;CL:0000211,8.52e-12,39;CL:0002319,9.33e-11,43;CL:0000221,1.59e-10,44;CL:0000133,1.59e-10,44;CL:0002321,8.13e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!9.13e-19!34;UBERON:0001017!8.72e-18!73;UBERON:0005743!8.72e-18!73;UBERON:0000073!3.39e-17!75;UBERON:0001016!3.39e-17!75;UBERON:0004121!4.03e-14!102;UBERON:0000924!4.03e-14!102;UBERON:0006601!4.03e-14!102;UBERON:0001049!5.53e-13!52;UBERON:0005068!5.53e-13!52;UBERON:0006241!5.53e-13!52;UBERON:0007135!5.53e-13!52;UBERON:0002616!3.32e-12!49;UBERON:0000955!6.71e-12!50;UBERON:0006238!6.71e-12!50;UBERON:0002791!1.76e-11!29;UBERON:0003528!1.76e-11!29;UBERON:0001893!1.76e-11!29;UBERON:0004684!1.93e-11!3;UBERON:0002275!1.93e-11!3;UBERON:0002346!3.11e-11!71;UBERON:0003075!3.11e-11!71;UBERON:0007284!3.11e-11!71;UBERON:0001948!3.17e-11!5;UBERON:0002315!3.17e-11!5;UBERON:0002257!3.32e-11!3;UBERON:0000033!4.07e-10!63;UBERON:0003080!2.14e-09!40;UBERON:0002240!2.32e-09!6;UBERON:0005174!2.32e-09!6;UBERON:0001137!2.32e-09!6;UBERON:0000956!1.10e-08!21;UBERON:0001869!1.10e-08!21;UBERON:0000203!1.10e-08!21;UBERON:0003056!1.49e-08!49;UBERON:0002780!5.11e-08!39;UBERON:0001890!5.11e-08!39;UBERON:0006240!5.11e-08!39;UBERON:0002950!7.51e-08!4;UBERON:0001891!7.51e-08!4;UBERON:0009616!7.51e-08!4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,2.47e-52,3;UBERON:0002275,2.47e-52,3;UBERON:0002257,2.99e-24,3;UBERON:0001948,5.16e-15,5;UBERON:0002315,5.16e-15,5;UBERON:0002240,1.08e-12,6;UBERON:0005174,1.08e-12,6;UBERON:0001137,1.08e-12,6;UBERON:0000073,1.10e-08,54;UBERON:0003076,7.73e-07,12;UBERON:0003057,7.73e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0.518448061542388,0.135005938331691,0.210324961351382,0.285650984403804,0,0.244981598429908,0.287536413054709,0,5.50579404996943,1.27687338085188,3.22573719838111,0,0.457438218012048,0,0.279182999001381,0,0.30559649555362,4.71405736757868,4.12877874317399,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449371918214468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0.343706364687375,0,0,0.675022500231806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0.518448061542388,0.135005938331691,0.210324961351382,0.285650984403804,0,0.244981598429908,0.287536413054709,0,5.50579404996943,1.27687338085188,3.22573719838111,0,0.457438218012048,0,0.279182999001381,0,0.30559649555362,4.71405736757868,4.12877874317399,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449371918214468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0.343706364687375,0,0,0.675022500231806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249810577937946,0,0,0,0,0 | ||
|short_description=p@chr7:67121440..67121451,- | |short_description=p@chr7:67121440..67121451,- | ||
}} | }} |
Latest revision as of 11:34, 5 August 2015
Short description: | p@chr7:67121440..67121451, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:67121440..67121451, - |
Coexpression cluster: | MCL_coexpression_mm9:438 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 2.47e-52 | 3 |
neuron of the ventral spinal cord | 2.99e-24 | 3 |
CNS neuron (sensu Vertebrata) | 1.61e-19 | 23 |
neuroblast (sensu Vertebrata) | 1.61e-19 | 23 |
neuron | 8.03e-14 | 33 |
neuronal stem cell | 8.03e-14 | 33 |
neuroblast | 8.03e-14 | 33 |
electrically signaling cell | 8.03e-14 | 33 |
electrically responsive cell | 8.52e-12 | 39 |
electrically active cell | 8.52e-12 | 39 |
neural cell | 9.33e-11 | 43 |
ectodermal cell | 1.59e-10 | 44 |
neurectodermal cell | 1.59e-10 | 44 |
embryonic cell | 8.13e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 2.47e-52 | 3 |
reticular formation | 2.47e-52 | 3 |
ventral horn of spinal cord | 2.99e-24 | 3 |
regional part of spinal cord | 5.16e-15 | 5 |
gray matter of spinal cord | 5.16e-15 | 5 |
spinal cord | 1.08e-12 | 6 |
dorsal region element | 1.08e-12 | 6 |
dorsum | 1.08e-12 | 6 |
regional part of nervous system | 1.10e-08 | 54 |
posterior neural tube | 7.73e-07 | 12 |
chordal neural plate | 7.73e-07 | 12 |