FFCP PHASE1:Mm9::chr4:13712228..13712267,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 7: | Line 7: | ||
|id=chr4:13712228..13712267,+ | |id=chr4:13712228..13712267,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.91e-07!333;UBERON:0004535!4.04e-07!23;UBERON:0001009!4.04e-07!23 | |ontology_enrichment_uberon=UBERON:0000468!1.91e-07!333;UBERON:0004535!4.04e-07!23;UBERON:0001009!4.04e-07!23 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,1.14e-08,23;UBERON:0001009,1.14e-08,23;UBERON:0002102,4.49e-07,7;UBERON:0004710,4.49e-07,7;UBERON:0005419,4.49e-07,7;UBERON:0005417,4.49e-07,7;UBERON:0005729,4.49e-07,7;UBERON:0007100,6.43e-07,18;UBERON:0000948,6.43e-07,18;UBERON:0005498,6.43e-07,18;UBERON:0004140,6.43e-07,18;UBERON:0009881,6.43e-07,18;UBERON:0004141,6.43e-07,18;UBERON:0003084,6.43e-07,18;UBERON:0007005,6.43e-07,18;UBERON:0004139,6.43e-07,18;UBERON:0004291,6.43e-07,18 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.3378881616066,12.3679856087808,7.52541683862894,6.25913075478431,0,0,0.194429899074283,1.81982348112971,0,0,0,0,2.05807548828758,8.30946975822394,4.64104883049698,0.404632921719196,0,0.633831403506179,2.37191172448392,2.66788438833342,0,0.988866362566974,0,1.19840044207362,1.15265491596466,0.414758449233911,0.270011876663381,0.841299845405528,0.285650984403804,0.662605622854841,1.10241719293459,0.479227355091182,0,1.10115880999389,0.127687338085188,0.46081959976873,0,0.274462930807229,0.52091337055676,0,1.12552522006336,0.61119299110724,0.294628585473668,1.28134512719193,0.931997229126503,0.227178579999552,0.226714680320357,0,0,0,0,0,0,0,1.1930122580464,0.779358013808606,0,0.422530259330042,2.56652954828636,7.64415719119937,0,0,0,0,0.22836775943812,1.03575153458869,0.148442139064825,0.867426633830679,0.304465478312141,0.230615497256059,0.753613202763113,1.05829836422134,0,0,2.16899035379867,0,0.808834249737046,1.32504911076236,0.484875253135222,1.86391761218122,2.63502717310392,2.09446706813455,0.255457055208591,0,0,0,1.19832511523858,2.74500361691176,0.879580464790051,0.869121600961382,0.255715457330331,0.41557608911912,1.78465389374533,2.95334155165917,0.373220911830279,0,1.26265113531884,5.59517904739626,2.5289231487682,5.58192602396583,4.06903008156431,2.65342346690179,3.45907044769094,3.93547243150861,3.88055056108524,4.52692785158969,10.4008344092301,13.3722854364601,6.35667624039967,11.6779844674751,8.00979983000983,7.40815691068596,2.18937693500343,0,0,0,3.52113813310353,2.34526059981096,3.24111710629827,5.20838418287463,3.73852040320067,4.62801338662135,4.41814495025775,2.41446061259657,5.02090972178829,1.81015834904829,0.32833492815819,1.78351381000883,1.16959989940266,0,1.8788898626452,2.3131894342054,0.308713837137853,0,0.264450566663544,2.34617075588757,2.55460339046482,1.80414445850931,0.80673409849337,0.444756087689741,0.951128130562796,0.949058123089023,1.4822905925161,0.251335208800269,0.795825888164603,0.38992817423824,0.898819408654221,0.432276099749388,0.597423819763102,0,0.799739588268102,0,0.203651327845314,0.193952487167626,0.631222379012867,0.569128834118316,0.147610147979602,0.156998727841375,0.246794327843601,0,1.33476084572875,0.589676985339609,0.674586337154561,0.608580364165509,1.68824011826692,0,0.287696137450811,0.162135226775035,0,0,0,0.312037673114561,0,0.179397413521912,0,2.40179147216586,1.32643988239339,0.651859905768103,0.509235257325564,0.469380496577004,0.502518772325447,0.952174563544055,0.195133647857799,0.315270288212382,0.44292937929755,0.637819074629948,1.80249646187312,0.172684981865896,1.59113964439663,0,0,0.491764273019036,0.275936746304732,1.44495530989013,0.703270119553219,9.50822683184717,1.51482556322624,1.89304931649754,0,0.646270193198397,0.477937595905104,0.222798674082394,0.283076530788832,0.809621403349789,1.46127928955656,1.18586333383957,0.642642632843614,1.56134093729095,2.67098405500883,2.76907830901079,2.14461159864296,0,2.91336763385978,2.11626489875326,0.754420319023592,1.18120757152309,0.307435147943927,1.03371317267288,1.81766864738753,0.712994756769443,0.316036757935816,0,1.03135543248187,0,4.32146625675145,1.03486947026204,1.28602221018955,2.30542303734956,1.96205699362278,1.48094118541909,0.608929898229199,0.704015124191131,0.847328283455281,0.220528398054962,1.6488625294148,5.16686165426898,3.31721087104857,2.26807453605959,0.820704498725306,0.874442509889552,1.66882771809459,0,3.30218988741156,1.66675074632741,0.941842285023455,0.27338845544205,0,0,0,0,0,1.42351197111511,2.03319467126849,0.432021363287205,0.627264888043406,1.52853794622324,1.07891477107857,1.40510874733071,0.26175594198403,0.259229946583586,0,0,1.79419855252775,1.32366792365678,0.972255941720238,1.54991788173277,2.02747350588934,1.17357238645754,1.3020438484395,1.67774951081137,0.724752362478018,0.864090018773596,0,0.405450430580328,0.308132871494482,0.129920822977795,0,0,0.120195449519969,0,0,0,0.100826185136841,0,0.0962118416403295,0,0.453460767230423,0,0,0,1.9318959403219,1.12609485270709,3.29672923681077,2.57242054894879,1.00314420807073,2.82375921308533,1.84130094602871,1.14579102687879,2.23409137046794,3.42541259885321,0.755393897389701,1.35004500046361,0.45032120322422,0,2.07104124700728,4.56664329370377,4.78829848081237,5.29274177837816,3.64660075602441,2.51535795153579,1.2869045591501,1.77797382241292,2.26638562962784,2.24643446714271,3.03236654116557,4.56262739802432,2.26351609663291,2.99652823903624,3.20125762024346,2.98664438569189,0.476293691283074,2.0859178670074,1.92909220463705,2.88460130562315,2.35518272215036,2.05721551431249,2.12970967391205,1.90748951957857,3.19762116591123,2.07040636913727,3.13074049199203,2.37806364734604,2.63069711437843,1.90125759384206,3.92799590160417,1.77952527186261,2.9551344712669,3.6830793885272,2.16911577660352,3.2794123866794,4.24677982494508,3.04111090979031,2.57845264857958,1.53030665655075,0.882365676478062,0.463735671240843 | |phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.3378881616066,12.3679856087808,7.52541683862894,6.25913075478431,0,0,0.194429899074283,1.81982348112971,0,0,0,0,2.05807548828758,8.30946975822394,4.64104883049698,0.404632921719196,0,0.633831403506179,2.37191172448392,2.66788438833342,0,0.988866362566974,0,1.19840044207362,1.15265491596466,0.414758449233911,0.270011876663381,0.841299845405528,0.285650984403804,0.662605622854841,1.10241719293459,0.479227355091182,0,1.10115880999389,0.127687338085188,0.46081959976873,0,0.274462930807229,0.52091337055676,0,1.12552522006336,0.61119299110724,0.294628585473668,1.28134512719193,0.931997229126503,0.227178579999552,0.226714680320357,0,0,0,0,0,0,0,1.1930122580464,0.779358013808606,0,0.422530259330042,2.56652954828636,7.64415719119937,0,0,0,0,0.22836775943812,1.03575153458869,0.148442139064825,0.867426633830679,0.304465478312141,0.230615497256059,0.753613202763113,1.05829836422134,0,0,2.16899035379867,0,0.808834249737046,1.32504911076236,0.484875253135222,1.86391761218122,2.63502717310392,2.09446706813455,0.255457055208591,0,0,0,1.19832511523858,2.74500361691176,0.879580464790051,0.869121600961382,0.255715457330331,0.41557608911912,1.78465389374533,2.95334155165917,0.373220911830279,0,1.26265113531884,5.59517904739626,2.5289231487682,5.58192602396583,4.06903008156431,2.65342346690179,3.45907044769094,3.93547243150861,3.88055056108524,4.52692785158969,10.4008344092301,13.3722854364601,6.35667624039967,11.6779844674751,8.00979983000983,7.40815691068596,2.18937693500343,0,0,0,3.52113813310353,2.34526059981096,3.24111710629827,5.20838418287463,3.73852040320067,4.62801338662135,4.41814495025775,2.41446061259657,5.02090972178829,1.81015834904829,0.32833492815819,1.78351381000883,1.16959989940266,0,1.8788898626452,2.3131894342054,0.308713837137853,0,0.264450566663544,2.34617075588757,2.55460339046482,1.80414445850931,0.80673409849337,0.444756087689741,0.951128130562796,0.949058123089023,1.4822905925161,0.251335208800269,0.795825888164603,0.38992817423824,0.898819408654221,0.432276099749388,0.597423819763102,0,0.799739588268102,0,0.203651327845314,0.193952487167626,0.631222379012867,0.569128834118316,0.147610147979602,0.156998727841375,0.246794327843601,0,1.33476084572875,0.589676985339609,0.674586337154561,0.608580364165509,1.68824011826692,0,0.287696137450811,0.162135226775035,0,0,0,0.312037673114561,0,0.179397413521912,0,2.40179147216586,1.32643988239339,0.651859905768103,0.509235257325564,0.469380496577004,0.502518772325447,0.952174563544055,0.195133647857799,0.315270288212382,0.44292937929755,0.637819074629948,1.80249646187312,0.172684981865896,1.59113964439663,0,0,0.491764273019036,0.275936746304732,1.44495530989013,0.703270119553219,9.50822683184717,1.51482556322624,1.89304931649754,0,0.646270193198397,0.477937595905104,0.222798674082394,0.283076530788832,0.809621403349789,1.46127928955656,1.18586333383957,0.642642632843614,1.56134093729095,2.67098405500883,2.76907830901079,2.14461159864296,0,2.91336763385978,2.11626489875326,0.754420319023592,1.18120757152309,0.307435147943927,1.03371317267288,1.81766864738753,0.712994756769443,0.316036757935816,0,1.03135543248187,0,4.32146625675145,1.03486947026204,1.28602221018955,2.30542303734956,1.96205699362278,1.48094118541909,0.608929898229199,0.704015124191131,0.847328283455281,0.220528398054962,1.6488625294148,5.16686165426898,3.31721087104857,2.26807453605959,0.820704498725306,0.874442509889552,1.66882771809459,0,3.30218988741156,1.66675074632741,0.941842285023455,0.27338845544205,0,0,0,0,0,1.42351197111511,2.03319467126849,0.432021363287205,0.627264888043406,1.52853794622324,1.07891477107857,1.40510874733071,0.26175594198403,0.259229946583586,0,0,1.79419855252775,1.32366792365678,0.972255941720238,1.54991788173277,2.02747350588934,1.17357238645754,1.3020438484395,1.67774951081137,0.724752362478018,0.864090018773596,0,0.405450430580328,0.308132871494482,0.129920822977795,0,0,0.120195449519969,0,0,0,0.100826185136841,0,0.0962118416403295,0,0.453460767230423,0,0,0,1.9318959403219,1.12609485270709,3.29672923681077,2.57242054894879,1.00314420807073,2.82375921308533,1.84130094602871,1.14579102687879,2.23409137046794,3.42541259885321,0.755393897389701,1.35004500046361,0.45032120322422,0,2.07104124700728,4.56664329370377,4.78829848081237,5.29274177837816,3.64660075602441,2.51535795153579,1.2869045591501,1.77797382241292,2.26638562962784,2.24643446714271,3.03236654116557,4.56262739802432,2.26351609663291,2.99652823903624,3.20125762024346,2.98664438569189,0.476293691283074,2.0859178670074,1.92909220463705,2.88460130562315,2.35518272215036,2.05721551431249,2.12970967391205,1.90748951957857,3.19762116591123,2.07040636913727,3.13074049199203,2.37806364734604,2.63069711437843,1.90125759384206,3.92799590160417,1.77952527186261,2.9551344712669,3.6830793885272,2.16911577660352,3.2794123866794,4.24677982494508,3.04111090979031,2.57845264857958,1.53030665655075,0.882365676478062,0.463735671240843 | ||
|short_description=p3@Runx1t1 | |short_description=p3@Runx1t1 | ||
}} | }} |
Revision as of 16:33, 14 November 2012
Short description: | p3@Runx1t1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Runx1t1_5end |
Coexpression cluster: | NA |
Association with transcript: | 299bp_to_ENSMUST00000098256, NM_009822, uc008sax.2_5end |
EntrezGene: | Runx1t1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 1.14e-08 | 23 |
circulatory system | 1.14e-08 | 23 |
forelimb | 4.49e-07 | 7 |
pectoral appendage | 4.49e-07 | 7 |
pectoral appendage bud | 4.49e-07 | 7 |
forelimb bud | 4.49e-07 | 7 |
forelimb/pectoral fin field | 4.49e-07 | 7 |
primary circulatory organ | 6.43e-07 | 18 |
heart | 6.43e-07 | 18 |
primitive heart tube | 6.43e-07 | 18 |
primary heart field | 6.43e-07 | 18 |
anterior lateral plate mesoderm | 6.43e-07 | 18 |
heart tube | 6.43e-07 | 18 |
heart primordium | 6.43e-07 | 18 |
cardiac mesoderm | 6.43e-07 | 18 |
cardiogenic plate | 6.43e-07 | 18 |
heart rudiment | 6.43e-07 | 18 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.