Personal tools

UBERON:0005641: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 18: Line 18:
|has_quality=
|has_quality=
|located_in=
|located_in=
|part_of=
|part_of=UBERON:0003051
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|is_obsolete=
|preceded_by=
|preceded_by=
}}
}}

Revision as of 13:40, 27 June 2012

Name:otocyst epithelium
Xrefs:
links:

EHDAA2:0001344
EMAPA:16671
EMAPA:16996
EMAPA:16999

VHOG:0000986

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0005291(embryonic tissue),UBERON:0010314(structure with developmental contribution from neural crest),UBERON:0010371(ecto-epithelium)
part_of:UBERON:0003051(ear vesicle)



Children

develops from:UBERON:0001849 (membranous labyrinth),UBERON:0010113 (future membranous labyrinth)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005641 (otocyst epithelium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
1.87e-86FFCP PHASE2:Mm9::chr11:75421384..75421397,+#_4e73b244d3d11a5635caac6413b9528bp@chr11:75421384..75421397, +
1.87e-86FFCP PHASE2:Mm9::chr8:13435173..13435186,+#_4e73b244d3d11a5635caac6413b9528bp6@Fam70b
1.87e-86FFCP PHASE1:Mm9::chr10:97109753..97109764,+#_4e73b244d3d11a5635caac6413b9528bp3@Epyc
1.87e-86FFCP PHASE1:Mm9::chr9:50968647..50968668,-#_4e73b244d3d11a5635caac6413b9528bp@chr9:50968647..50968668, -
1.87e-86FFCP PHASE2:Mm9::chr10:81091447..81091464,+#_4e73b244d3d11a5635caac6413b9528bp9@Ankrd24
1.87e-86FFCP PHASE1:Mm9::chr19:55255206..55255223,+#_4e73b244d3d11a5635caac6413b9528bp1@Tectb
1.87e-86FFCP PHASE2:Mm9::chr1:78523144..78523177,+#_4e73b244d3d11a5635caac6413b9528bp@chr1:78523144..78523177, +
1.87e-86FFCP PHASE2:Mm9::chr7:53496326..53496340,+#_4e73b244d3d11a5635caac6413b9528bp1@Otog
1.87e-86FFCP PHASE2:Mm9::chr5:3909310..3909321,+#_4e73b244d3d11a5635caac6413b9528bp@chr5:3909310..3909321, +
1.87e-86FFCP PHASE2:Mm9::chr14:31283072..31283081,-#_4e73b244d3d11a5635caac6413b9528bp@chr14:31283072..31283081, -
1.87e-86FFCP PHASE1:Mm9::chr1:16651649..16651655,+#_4e73b244d3d11a5635caac6413b9528bp@chr1:16651649..16651655, +
1.87e-86FFCP PHASE2:Mm9::chr1:172843847..172843880,-#_4e73b244d3d11a5635caac6413b9528bp@chr1:172843847..172843880, -
1.87e-86FFCP PHASE2:Mm9::chr19:4140290..4140321,+#_4e73b244d3d11a5635caac6413b9528bp2@Gpr152
1.87e-86FFCP PHASE1:Mm9::chr1:93218694..93218705,+#_4e73b244d3d11a5635caac6413b9528bp1@Espnl
1.87e-86FFCP PHASE2:Mm9::chr6:30619443..30619450,-#_4e73b244d3d11a5635caac6413b9528bp13@Tsga14
1.87e-86FFCP PHASE1:Mm9::chr13:43699228..43699239,+#_4e73b244d3d11a5635caac6413b9528bp@chr13:43699228..43699239, +
1.87e-86FFCP PHASE1:Mm9::chr8:13414266..13414279,+#_4e73b244d3d11a5635caac6413b9528bp@chr8:13414266..13414279, +
1.87e-86FFCP PHASE2:Mm9::chr2:67011921..67011934,+#_4e73b244d3d11a5635caac6413b9528bp2@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr9:42207965..42207978,-#_4e73b244d3d11a5635caac6413b9528bp5@Tecta
1.87e-86FFCP PHASE1:Mm9::chr15:58480061..58480066,+#_4e73b244d3d11a5635caac6413b9528bp5@Fer1l6
1.87e-86FFCP PHASE1:Mm9::chr8:94180607..94180619,-#_4e73b244d3d11a5635caac6413b9528bp@chr8:94180607..94180619, -
1.87e-86FFCP PHASE1:Mm9::chr2:170417150..170417155,-#_4e73b244d3d11a5635caac6413b9528bp@chr2:170417150..170417155, -
1.87e-86FFCP PHASE2:Mm9::chr11:102123554..102123566,+#_4e73b244d3d11a5635caac6413b9528bp4@BC030867
1.87e-86FFCP PHASE2:Mm9::chr5:28035962..28035983,+#_4e73b244d3d11a5635caac6413b9528bp@chr5:28035962..28035983, +
1.87e-86FFCP PHASE1:Mm9::chr12:109905399..109905416,+#_4e73b244d3d11a5635caac6413b9528bp@chr12:109905399..109905416, +
1.87e-86FFCP PHASE1:Mm9::chr4:115556989..115556997,+#_4e73b244d3d11a5635caac6413b9528bp1@Kncn
1.87e-86FFCP PHASE1:Mm9::chr14:31283085..31283097,-#_4e73b244d3d11a5635caac6413b9528bp@chr14:31283085..31283097, -
1.87e-86FFCP PHASE2:Mm9::chr3:81012915..81012923,+#_4e73b244d3d11a5635caac6413b9528bp@chr3:81012915..81012923, +
1.87e-86FFCP PHASE1:Mm9::chr1:60561636..60561645,-#_4e73b244d3d11a5635caac6413b9528bp@chr1:60561636..60561645, -
1.87e-86FFCP PHASE1:Mm9::chr10:80806047..80806059,-#_4e73b244d3d11a5635caac6413b9528bp4@Gipc3
1.87e-86FFCP PHASE1:Mm9::chr9:42207792..42207805,-#_4e73b244d3d11a5635caac6413b9528bp11@Tecta
1.87e-86FFCP PHASE1:Mm9::chr2:73232344..73232356,-#_4e73b244d3d11a5635caac6413b9528bp@chr2:73232344..73232356, -
1.87e-86FFCP PHASE1:Mm9::chr17:13983102..13983126,+#_4e73b244d3d11a5635caac6413b9528bp@chr17:13983102..13983126, +
1.87e-86FFCP PHASE2:Mm9::chr17:13983179..13983190,+#_4e73b244d3d11a5635caac6413b9528bp@chr17:13983179..13983190, +
1.87e-86FFCP PHASE1:Mm9::chr7:88068153..88068160,-#_4e73b244d3d11a5635caac6413b9528bp10@Sec11a
1.87e-86FFCP PHASE2:Mm9::chr9:42206784..42206793,-#_4e73b244d3d11a5635caac6413b9528bp@chr9:42206784..42206793, -
1.87e-86FFCP PHASE2:Mm9::chr19:55255289..55255299,+#_4e73b244d3d11a5635caac6413b9528bp2@Tectb
1.87e-86FFCP PHASE1:Mm9::chr15:103146966..103146971,-#_4e73b244d3d11a5635caac6413b9528bp@chr15:103146966..103146971, -
1.87e-86FFCP PHASE2:Mm9::chr5:21371424..21371435,-#_4e73b244d3d11a5635caac6413b9528bp2@Slc26a5
1.87e-86FFCP PHASE1:Mm9::chr3:31585340..31585360,+#_4e73b244d3d11a5635caac6413b9528bp@chr3:31585340..31585360, +
1.87e-86FFCP PHASE2:Mm9::chr11:120222470..120222516,+#_4e73b244d3d11a5635caac6413b9528bp2@Fscn2
1.87e-86FFCP PHASE1:Mm9::chr13:78322370..78322376,-#_4e73b244d3d11a5635caac6413b9528bp4@uc007rhb.1
1.87e-86FFCP PHASE1:Mm9::chr10:107349418..107349423,-#_4e73b244d3d11a5635caac6413b9528bp5@Otogl
1.87e-86FFCP PHASE1:Mm9::chr15:89215306..89215315,+#_4e73b244d3d11a5635caac6413b9528bp@chr15:89215306..89215315, +
1.87e-86FFCP PHASE1:Mm9::chr5:21371424..21371435,-#_4e73b244d3d11a5635caac6413b9528bp2@Slc26a5
1.87e-86FFCP PHASE2:Mm9::chr2:29935952..29935993,+#_4e73b244d3d11a5635caac6413b9528bp7@Pkn3
1.87e-86FFCP PHASE1:Mm9::chr16:93971325..93971337,-#_4e73b244d3d11a5635caac6413b9528bp@chr16:93971325..93971337, -
1.87e-86FFCP PHASE2:Mm9::chr2:121206677..121206683,-#_4e73b244d3d11a5635caac6413b9528bp3@Strc
1.87e-86FFCP PHASE1:Mm9::chr6:30619378..30619412,-#_4e73b244d3d11a5635caac6413b9528bp11@Tsga14
1.87e-86FFCP PHASE2:Mm9::chr1:93235228..93235249,+#_4e73b244d3d11a5635caac6413b9528bp@chr1:93235228..93235249, +
1.87e-86FFCP PHASE2:Mm9::chr15:12848147..12848162,+#_4e73b244d3d11a5635caac6413b9528bp@chr15:12848147..12848162, +
1.87e-86FFCP PHASE1:Mm9::chr2:14685072..14685084,+#_4e73b244d3d11a5635caac6413b9528bp41@Cacnb2
1.87e-86FFCP PHASE2:Mm9::chr13:78257518..78257522,+#_4e73b244d3d11a5635caac6413b9528bp@chr13:78257518..78257522, +
1.87e-86FFCP PHASE2:Mm9::chr1:16651649..16651655,+#_4e73b244d3d11a5635caac6413b9528bp@chr1:16651649..16651655, +
1.87e-86FFCP PHASE2:Mm9::chr7:109265277..109265288,-#_4e73b244d3d11a5635caac6413b9528bp4@Chrna10
1.87e-86FFCP PHASE1:Mm9::chr1:172843847..172843880,-#_4e73b244d3d11a5635caac6413b9528bp@chr1:172843847..172843880, -
1.87e-86FFCP PHASE1:Mm9::chr7:139597684..139597691,+#_4e73b244d3d11a5635caac6413b9528bp@chr7:139597684..139597691, +
1.87e-86FFCP PHASE2:Mm9::chr19:21028739..21028785,-#_4e73b244d3d11a5635caac6413b9528bp1@Tmc1
1.87e-86FFCP PHASE2:Mm9::chr2:9811162..9811171,-#_4e73b244d3d11a5635caac6413b9528bp2@9230102O04Rik
1.87e-86FFCP PHASE1:Mm9::chr14:63099970..63099980,-#_4e73b244d3d11a5635caac6413b9528bp@chr14:63099970..63099980, -
1.87e-86FFCP PHASE1:Mm9::chr1:94627290..94627299,-#_4e73b244d3d11a5635caac6413b9528bp@chr1:94627290..94627299, -
1.87e-86FFCP PHASE2:Mm9::chr14:102297728..102297742,+#_4e73b244d3d11a5635caac6413b9528bp@chr14:102297728..102297742, +
1.87e-86FFCP PHASE1:Mm9::chr17:31335869..31335899,-#_4e73b244d3d11a5635caac6413b9528bp1@Tmprss3
1.87e-86FFCP PHASE1:Mm9::chr13:58283583..58283607,-#_4e73b244d3d11a5635caac6413b9528bp@chr13:58283583..58283607, -
1.87e-86FFCP PHASE2:Mm9::chr11:8405038..8405048,-#_4e73b244d3d11a5635caac6413b9528bp@chr11:8405038..8405048, -
1.87e-86FFCP PHASE1:Mm9::chr5:144115382..144115389,+#_4e73b244d3d11a5635caac6413b9528bp@chr5:144115382..144115389, +
1.87e-86FFCP PHASE2:Mm9::chr5:30710403..30710406,-#_4e73b244d3d11a5635caac6413b9528bp10@Otof
1.87e-86FFCP PHASE1:Mm9::chr12:13508015..13508019,+#_4e73b244d3d11a5635caac6413b9528bp@chr12:13508015..13508019, +
1.87e-86FFCP PHASE2:Mm9::chr10:107349378..107349390,-#_4e73b244d3d11a5635caac6413b9528bp1@Otogl
1.87e-86FFCP PHASE1:Mm9::chr5:72652660..72652667,+#_4e73b244d3d11a5635caac6413b9528bp@chr5:72652660..72652667, +
1.87e-86FFCP PHASE1:Mm9::chr14:47293487..47293493,-#_4e73b244d3d11a5635caac6413b9528bp@chr14:47293487..47293493, -
1.87e-86FFCP PHASE1:Mm9::chr1:78523144..78523177,+#_4e73b244d3d11a5635caac6413b9528bp@chr1:78523144..78523177, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207983..42207995,-#_4e73b244d3d11a5635caac6413b9528bp3@Tecta
1.87e-86FFCP PHASE1:Mm9::chr7:53496326..53496340,+#_4e73b244d3d11a5635caac6413b9528bp1@Otog
1.87e-86FFCP PHASE2:Mm9::chr17:31335953..31335957,-#_4e73b244d3d11a5635caac6413b9528bp3@Tmprss3
1.87e-86FFCP PHASE1:Mm9::chr2:121206667..121206674,-#_4e73b244d3d11a5635caac6413b9528bp2@Strc
1.87e-86FFCP PHASE2:Mm9::chr9:42207792..42207805,-#_4e73b244d3d11a5635caac6413b9528bp11@Tecta
1.87e-86FFCP PHASE1:Mm9::chr11:120222470..120222516,+#_4e73b244d3d11a5635caac6413b9528bp2@Fscn2
1.87e-86FFCP PHASE2:Mm9::chr15:89215306..89215315,+#_4e73b244d3d11a5635caac6413b9528bp@chr15:89215306..89215315, +
1.87e-86FFCP PHASE2:Mm9::chr7:109052262..109052291,-#_4e73b244d3d11a5635caac6413b9528bp1@Tomt
1.87e-86FFCP PHASE2:Mm9::chr4:101908153..101908163,+#_4e73b244d3d11a5635caac6413b9528bp@chr4:101908153..101908163, +
1.87e-86FFCP PHASE1:Mm9::chr18:42158627..42158630,-#_4e73b244d3d11a5635caac6413b9528bp@chr18:42158627..42158630, -
1.87e-86FFCP PHASE2:Mm9::chr16:93971357..93971363,-#_4e73b244d3d11a5635caac6413b9528bp@chr16:93971357..93971363, -
1.87e-86FFCP PHASE1:Mm9::chr5:30710455..30710464,-#_4e73b244d3d11a5635caac6413b9528bp9@Otof
1.87e-86FFCP PHASE1:Mm9::chr10:67371994..67372010,+#_4e73b244d3d11a5635caac6413b9528bp@chr10:67371994..67372010, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207375..42207384,-#_4e73b244d3d11a5635caac6413b9528bp@chr9:42207375..42207384, -
1.87e-86FFCP PHASE1:Mm9::chr2:67011956..67011967,+#_4e73b244d3d11a5635caac6413b9528bp1@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr8:13414289..13414295,+#_4e73b244d3d11a5635caac6413b9528bp@chr8:13414289..13414295, +
1.87e-86FFCP PHASE2:Mm9::chr9:66860888..66860899,+#_4e73b244d3d11a5635caac6413b9528bp@chr9:66860888..66860899, +
1.87e-86FFCP PHASE2:Mm9::chr2:53464178..53464186,+#_4e73b244d3d11a5635caac6413b9528bp@chr2:53464178..53464186, +
1.87e-86FFCP PHASE1:Mm9::chr3:154459231..154459240,+#_4e73b244d3d11a5635caac6413b9528bp@chr3:154459231..154459240, +
1.87e-86FFCP PHASE1:Mm9::chr13:76964459..76964469,+#_4e73b244d3d11a5635caac6413b9528bp15@Mctp1
1.87e-86FFCP PHASE2:Mm9::chr12:109905399..109905416,+#_4e73b244d3d11a5635caac6413b9528bp@chr12:109905399..109905416, +
1.87e-86FFCP PHASE1:Mm9::chr7:141605556..141605563,-#_4e73b244d3d11a5635caac6413b9528bp@chr7:141605556..141605563, -
1.87e-86FFCP PHASE1:Mm9::chr16:45693840..45693856,-#_4e73b244d3d11a5635caac6413b9528bp1@Tmprss7
1.87e-86FFCP PHASE2:Mm9::chr10:97109753..97109764,+#_4e73b244d3d11a5635caac6413b9528bp3@Epyc
1.87e-86FFCP PHASE2:Mm9::chr6:113251570..113251578,+#_4e73b244d3d11a5635caac6413b9528bp@chr6:113251570..113251578, +
1.87e-86FFCP PHASE1:Mm9::chr19:55255289..55255299,+#_4e73b244d3d11a5635caac6413b9528bp2@Tectb
1.87e-86FFCP PHASE1:Mm9::chr2:136942131..136942142,-#_4e73b244d3d11a5635caac6413b9528bp6@Jag1
1.87e-86FFCP PHASE2:Mm9::chr13:76964459..76964469,+#_4e73b244d3d11a5635caac6413b9528bp15@Mctp1