FFCP PHASE1:Hg19::chr5:52083850..52083861,+: Difference between revisions
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002504;6.57e-09;3!CL:1000279;6.57e-09;3!CL:1000280;6.57e-09;3!CL:0000346;2.36e-08;3!CL:1000428;2.36e-08;3!CL:0000134;6.73e-08;55!CL:0000048;1.70e-07;58!CL:0002195;4.81e-07;2!CL:0002571;4.81e-07;2 | |ontology_enrichment_celltype_v019=CL:0002504;6.57e-09;3!CL:1000279;6.57e-09;3!CL:1000280;6.57e-09;3!CL:0000346;2.36e-08;3!CL:1000428;2.36e-08;3!CL:0000134;6.73e-08;55!CL:0000048;1.70e-07;58!CL:0002195;4.81e-07;2!CL:0002571;4.81e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002504,1.20e-08,3;CL:1000279,1.20e-08,3;CL:1000280,1.20e-08,3;CL:0000346,2.04e-08,3;CL:1000428,2.04e-08,3;CL:0002195,4.32e-07,2;CL:0002571,4.32e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.32e-10;29 | |ontology_enrichment_development_v019=UBERON:0008947;1.32e-10;29 | ||
|ontology_enrichment_disease=DOID:2394!1.36e-07!14 | |ontology_enrichment_disease=DOID:2394!1.36e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;8.84e-07;14 | |ontology_enrichment_disease_v019=DOID:2394;8.84e-07;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,8.58e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0003104!2.34e-10!238;UBERON:0009142!2.34e-10!238;UBERON:0000468!8.38e-10!659;UBERON:0001007!4.93e-09!155;UBERON:0001555!4.93e-09!155;UBERON:0007026!4.93e-09!155;UBERON:0004921!4.93e-09!129;UBERON:0004185!4.93e-09!129;UBERON:0000481!1.19e-08!347;UBERON:0001737!1.20e-08!9;UBERON:0000467!2.46e-08!625;UBERON:0000480!3.18e-08!626;UBERON:0004119!5.00e-08!169;UBERON:0000925!5.00e-08!169;UBERON:0006595!5.00e-08!169;UBERON:0001048!4.18e-07!168 | |ontology_enrichment_uberon=UBERON:0003104!2.34e-10!238;UBERON:0009142!2.34e-10!238;UBERON:0000468!8.38e-10!659;UBERON:0001007!4.93e-09!155;UBERON:0001555!4.93e-09!155;UBERON:0007026!4.93e-09!155;UBERON:0004921!4.93e-09!129;UBERON:0004185!4.93e-09!129;UBERON:0000481!1.19e-08!347;UBERON:0001737!1.20e-08!9;UBERON:0000467!2.46e-08!625;UBERON:0000480!3.18e-08!626;UBERON:0004119!5.00e-08!169;UBERON:0000925!5.00e-08!169;UBERON:0006595!5.00e-08!169;UBERON:0001048!4.18e-07!168 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.45e-22;9!UBERON:0001557;2.45e-22;9!UBERON:0000412;2.36e-08;3!UBERON:0001992;2.36e-08;3 | |ontology_enrichment_uberon_v019=UBERON:0001737;2.45e-22;9!UBERON:0001557;2.45e-22;9!UBERON:0000412;2.36e-08;3!UBERON:0001992;2.36e-08;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.35e-22,9;UBERON:0004921,1.98e-10,118;UBERON:0001048,8.72e-10,160;UBERON:0001557,9.02e-10,19;UBERON:0000412,2.04e-08,3;UBERON:0001992,2.04e-08,3;UBERON:0008947,1.43e-07,38;UBERON:0003258,1.43e-07,38;UBERON:0001007,2.81e-07,145;UBERON:0001555,2.81e-07,145;UBERON:0007026,2.81e-07,145;UBERON:0005409,8.75e-07,25 | |||
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| ||
|short_description=p9@PELO | |short_description=p9@PELO | ||
}} | }} |
Revision as of 00:50, 17 November 2012
Short description: | p9@PELO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_PELO_5end |
Coexpression cluster: | C2823_mesenchymal_alveolar_spleen_Smooth_normal_mesodermal_Mesenchymal |
Association with transcript: | 63bp_to_ENST00000506949_5end |
EntrezGene: | PELO |
HGNC: | 8829 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
enteric smooth muscle cell | 1.20e-08 | 3 |
smooth muscle cell of large intestine | 1.20e-08 | 3 |
smooth muscle cell of colon | 1.20e-08 | 3 |
hair follicle dermal papilla cell | 2.04e-08 | 3 |
stem cell of epidermis | 2.04e-08 | 3 |
hepatic stem cell | 4.32e-07 | 2 |
hepatic mesenchymal stem cell | 4.32e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.35e-22 | 9 |
subdivision of digestive tract | 1.98e-10 | 118 |
primordium | 8.72e-10 | 160 |
upper respiratory tract | 9.02e-10 | 19 |
dermal papilla | 2.04e-08 | 3 |
papillary layer of dermis | 2.04e-08 | 3 |
respiratory primordium | 1.43e-07 | 38 |
endoderm of foregut | 1.43e-07 | 38 |
digestive system | 2.81e-07 | 145 |
digestive tract | 2.81e-07 | 145 |
primitive gut | 2.81e-07 | 145 |
gastrointestinal system | 8.75e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.58e-07 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.