FFCP PHASE1:Hg19::chr21:45681774..45681821,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0000039!2.23e-42!7;CL:0000586!2.23e-42!7;CL:0002322!5.54e-40!5;CL:0002150!3.01e-11!3;CL:0000861!3.01e-11!3;CL:0000148!8.34e-08!10;CL:0000541!8.34e-08!10 | |ontology_enrichment_celltype=CL:0000039!2.23e-42!7;CL:0000586!2.23e-42!7;CL:0002322!5.54e-40!5;CL:0002150!3.01e-11!3;CL:0000861!3.01e-11!3;CL:0000148!8.34e-08!10;CL:0000541!8.34e-08!10 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.18e-92;7!CL:0000586;1.18e-92;7 | |ontology_enrichment_celltype_v019=CL:0000039;1.18e-92;7!CL:0000586;1.18e-92;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.18e-92,7;CL:0000586,1.18e-92,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.90e-29;10!UBERON:0005564;1.90e-29;10!UBERON:0003056;3.16e-07;3 | |ontology_enrichment_development_v019=UBERON:0009117;1.90e-29;10!UBERON:0005564;1.90e-29;10!UBERON:0003056;3.16e-07;3 | ||
|ontology_enrichment_disease=DOID:3095!6.25e-23!22;DOID:2994!6.25e-23!22;DOID:1799!1.12e-09!1;DOID:10165!1.12e-09!1;DOID:1798!1.12e-09!1;DOID:5409!6.47e-09!4;DOID:305!2.24e-07!106;DOID:0050687!2.83e-07!143 | |ontology_enrichment_disease=DOID:3095!6.25e-23!22;DOID:2994!6.25e-23!22;DOID:1799!1.12e-09!1;DOID:10165!1.12e-09!1;DOID:1798!1.12e-09!1;DOID:5409!6.47e-09!4;DOID:305!2.24e-07!106;DOID:0050687!2.83e-07!143 | ||
|ontology_enrichment_disease_v019=DOID:3095;5.93e-40;22!DOID:2994;5.93e-40;22!DOID:1799;1.88e-19;1!DOID:10165;1.88e-19;1!DOID:1798;1.88e-19;1 | |ontology_enrichment_disease_v019=DOID:3095;5.93e-40;22!DOID:2994;5.93e-40;22!DOID:1799;1.88e-19;1!DOID:10165;1.88e-19;1!DOID:1798;1.88e-19;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,5.93e-40,22;DOID:2994,5.93e-40,22;DOID:1799,1.88e-19,1;DOID:10165,1.88e-19,1;DOID:1798,1.88e-19,1;DOID:0050687,1.11e-09,143;DOID:305,4.86e-08,106;DOID:162,5.71e-07,235;DOID:14566,8.30e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0000473!5.89e-17!8;UBERON:0003135!2.21e-12!11 | |ontology_enrichment_uberon=UBERON:0000473!5.89e-17!8;UBERON:0003135!2.21e-12!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.14e-36;8!UBERON:0003135;8.10e-27;11!UBERON:0000991;2.95e-14;21!UBERON:0003101;1.26e-13;22!UBERON:0000079;1.26e-13;22!UBERON:0002323;1.85e-09;45!UBERON:0000922;8.27e-07;49 | |ontology_enrichment_uberon_v019=UBERON:0000473;1.14e-36;8!UBERON:0003135;8.10e-27;11!UBERON:0000991;2.95e-14;21!UBERON:0003101;1.26e-13;22!UBERON:0000079;1.26e-13;22!UBERON:0002323;1.85e-09;45!UBERON:0000922;8.27e-07;49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.14e-36,8;UBERON:0003135,8.10e-27,11;UBERON:0000991,2.95e-14,21;UBERON:0009196,2.95e-14,21;UBERON:0009117,2.95e-14,21;UBERON:0005564,2.95e-14,21;UBERON:0004176,1.26e-13,22;UBERON:0003101,1.26e-13,22;UBERON:0000079,1.26e-13,22;UBERON:0002323,5.39e-10,46;UBERON:0004458,2.19e-09,49;UBERON:0003886,1.61e-08,54;UBERON:0002553,1.53e-07,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975789649036763,0.530119073285941,0.813357600086629,0.518305275076852,1.51392510525377,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,120.584921994955,19.3876511925108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482259445395058,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,51.3337121183588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10609528212909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,1.42922671769058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05943601498347,0.126698501011437,90.8720473001057,61.1927858058134,334.58932920637,22.8143860756061,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975789649036763,0.530119073285941,0.813357600086629,0.518305275076852,1.51392510525377,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,120.584921994955,19.3876511925108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482259445395058,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,51.3337121183588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10609528212909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,1.42922671769058,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05943601498347,0.126698501011437,90.8720473001057,61.1927858058134,334.58932920637,22.8143860756061,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@DNMT3L | |short_description=p1@DNMT3L | ||
}} | }} |
Revision as of 21:07, 17 November 2012
Short description: | p1@DNMT3L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_DNMT3L_5end |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | -9bp_to_ENST00000431166_5end |
EntrezGene: | DNMT3L |
HGNC: | 2980 |
UniProt: | C9J0T5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.18e-92 | 7 |
germ cell | 1.18e-92 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 1.14e-36 | 8 |
male reproductive organ | 8.10e-27 | 11 |
gonad | 2.95e-14 | 21 |
indifferent external genitalia | 2.95e-14 | 21 |
indifferent gonad | 2.95e-14 | 21 |
gonad primordium | 2.95e-14 | 21 |
external genitalia | 1.26e-13 | 22 |
male organism | 1.26e-13 | 22 |
male reproductive system | 1.26e-13 | 22 |
body cavity | 5.39e-10 | 46 |
body cavity or lining | 2.19e-09 | 49 |
body cavity precursor | 1.61e-08 | 54 |
anatomical cavity | 1.53e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 5.93e-40 | 22 |
germ cell cancer | 5.93e-40 | 22 |
islet cell tumor | 1.88e-19 | 1 |
endocrine pancreas cancer | 1.88e-19 | 1 |
pancreatic endocrine carcinoma | 1.88e-19 | 1 |
cell type cancer | 1.11e-09 | 143 |
carcinoma | 4.86e-08 | 106 |
cancer | 5.71e-07 | 235 |
disease of cellular proliferation | 8.30e-07 | 239 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.