FFCP PHASE1:Hg19::chr19:39402817..39402833,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000047!6.73e-09!8;CL:0000133!1.95e-07!59;CL:0000242!4.25e-07!2;CL:0002319!9.67e-07!25 | |ontology_enrichment_celltype=CL:0000047!6.73e-09!8;CL:0000133!1.95e-07!59;CL:0000242!4.25e-07!2;CL:0002319!9.67e-07!25 | ||
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|ontology_enrichment_celltype_v019_2=CL:0000242,7.70e-21,2;CL:0000047,1.76e-19,8;CL:0000540,4.60e-15,6;CL:0000031,4.60e-15,6;CL:0000404,4.60e-15,6;CL:0002319,1.52e-12,25;CL:0000133,3.91e-09,59;CL:0000312,6.87e-09,5;CL:0000240,1.52e-07,6;CL:0000311,1.52e-07,6;CL:0000079,1.52e-07,6;CL:0000237,1.52e-07,6;CL:0000036,1.52e-07,6;CL:0000357,1.52e-07,6;CL:0000114,1.52e-07,6;CL:0000221,2.36e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000031;4.48e-15;6!UBERON:0000358;6.76e-11;1!CL:0000357;1.52e-07;6!CL:0000114;1.52e-07;6 | |ontology_enrichment_development_v019=CL:0000031;4.48e-15;6!UBERON:0000358;6.76e-11;1!CL:0000357;1.52e-07;6!CL:0000114;1.52e-07;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:169;3.01e-07;6 | |ontology_enrichment_disease_v019=DOID:169;3.01e-07;6 | ||
|ontology_enrichment_disease_v019_2=DOID:169,3.15e-07,6 | |||
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|ontology_enrichment_uberon_v019=UBERON:0007029;3.76e-11;1!UBERON:0000013;1.57e-08;5!UBERON:0002410;1.57e-08;5 | |ontology_enrichment_uberon_v019=UBERON:0007029;3.76e-11;1!UBERON:0000013;1.57e-08;5!UBERON:0002410;1.57e-08;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.37e-13,89;UBERON:0007029,3.76e-11,1;UBERON:0001017,6.81e-10,81;UBERON:0004121,7.00e-10,171;UBERON:0000924,7.00e-10,171;UBERON:0006601,7.00e-10,171;UBERON:0000013,1.66e-08,5;UBERON:0002410,1.66e-08,5 | |||
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| ||
|short_description=p1@LOC643669 | |short_description=p1@LOC643669 | ||
}} | }} |
Revision as of 09:10, 19 November 2012
Short description: | p1@LOC643669 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LOC643669_5end |
Coexpression cluster: | C150_merkel_carcinoid_nonsmall_gastrointestinal_argyrophil_pineal_small |
Association with transcript: | -19bp_to_NM_001243212_5end |
EntrezGene: | LOC643669 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 7.70e-21 | 2 |
neuronal stem cell | 1.76e-19 | 8 |
neuron | 4.60e-15 | 6 |
neuroblast | 4.60e-15 | 6 |
electrically signaling cell | 4.60e-15 | 6 |
neural cell | 1.52e-12 | 25 |
neurectodermal cell | 3.91e-09 | 59 |
keratinocyte | 6.87e-09 | 5 |
stratified squamous epithelial cell | 1.52e-07 | 6 |
keratin accumulating cell | 1.52e-07 | 6 |
stratified epithelial cell | 1.52e-07 | 6 |
keratinizing barrier epithelial cell | 1.52e-07 | 6 |
epithelial fate stem cell | 1.52e-07 | 6 |
stratified epithelial stem cell | 1.52e-07 | 6 |
surface ectodermal cell | 1.52e-07 | 6 |
ectodermal cell | 2.36e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
nervous system | 7.37e-13 | 89 |
surface | 3.76e-11 | 1 |
central nervous system | 6.81e-10 | 81 |
ectoderm-derived structure | 7.00e-10 | 171 |
ectoderm | 7.00e-10 | 171 |
presumptive ectoderm | 7.00e-10 | 171 |
sympathetic nervous system | 1.66e-08 | 5 |
autonomic nervous system | 1.66e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 3.15e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.