FFCP PHASE1:Hg19::chr1:172972632..172972638,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002620!6.43e-18!23;CL:0000057!7.21e-17!75;CL:0002579!1.24e-13!3;CL:0000055!1.48e-12!180 | |ontology_enrichment_celltype=CL:0002620!6.43e-18!23;CL:0000057!7.21e-17!75;CL:0002579!1.24e-13!3;CL:0000055!1.48e-12!180 | ||
|ontology_enrichment_celltype_v019=CL:0000511;7.62e-26;1!CL:0002625;7.62e-26;1!CL:0000216;7.62e-26;1!CL:0002620;8.82e-18;23!CL:0000632;1.53e-09;3!CL:1000306;1.80e-07;4!CL:0002547;1.80e-07;4 | |ontology_enrichment_celltype_v019=CL:0000511;7.62e-26;1!CL:0002625;7.62e-26;1!CL:0000216;7.62e-26;1!CL:0002620;8.82e-18;23!CL:0000632;1.53e-09;3!CL:1000306;1.80e-07;4!CL:0002547;1.80e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000511,9.79e-26,1;CL:0002625,9.79e-26,1;CL:0000216,9.79e-26,1;CL:0002620,8.82e-18,23;CL:0000057,6.70e-12,76;CL:0000632,1.41e-09,3;CL:1000306,1.59e-07,4;CL:0002547,1.59e-07,4 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:17!3.63e-23!5;DOID:450!3.63e-23!5;DOID:66!3.63e-23!5;DOID:423!3.63e-23!5;DOID:0080000!3.63e-23!5;DOID:11722!3.63e-23!5 | |ontology_enrichment_disease=DOID:17!3.63e-23!5;DOID:450!3.63e-23!5;DOID:66!3.63e-23!5;DOID:423!3.63e-23!5;DOID:0080000!3.63e-23!5;DOID:11722!3.63e-23!5 | ||
|ontology_enrichment_disease_v019=DOID:2513;7.62e-26;1!DOID:3571;7.62e-26;1!DOID:17;8.12e-21;5!DOID:450;8.12e-21;5!DOID:66;8.12e-21;5!DOID:423;8.12e-21;5!DOID:0080000;8.12e-21;5!DOID:11722;8.12e-21;5!DOID:3451;1.21e-13;2!DOID:4159;1.21e-13;2!DOID:0060122;1.21e-13;2!DOID:3350;1.21e-13;2 | |ontology_enrichment_disease_v019=DOID:2513;7.62e-26;1!DOID:3571;7.62e-26;1!DOID:17;8.12e-21;5!DOID:450;8.12e-21;5!DOID:66;8.12e-21;5!DOID:423;8.12e-21;5!DOID:0080000;8.12e-21;5!DOID:11722;8.12e-21;5!DOID:3451;1.21e-13;2!DOID:4159;1.21e-13;2!DOID:0060122;1.21e-13;2!DOID:3350;1.21e-13;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3571,5.93e-26,1;DOID:2513,1.26e-25,1;DOID:17,8.13e-21,5;DOID:450,8.13e-21,5;DOID:66,8.13e-21,5;DOID:423,8.13e-21,5;DOID:0080000,8.13e-21,5;DOID:11722,8.13e-21,5;DOID:3350,1.07e-13,2;DOID:3451,1.55e-13,2;DOID:4159,1.55e-13,2;DOID:0060122,1.55e-13,2 | |||
|ontology_enrichment_uberon=UBERON:0002097!1.39e-11!40;UBERON:0002199!4.78e-10!45;UBERON:0002416!4.78e-10!45;UBERON:0003102!2.53e-08!95;UBERON:0003688!4.84e-07!6;UBERON:0002358!4.84e-07!6;UBERON:0003684!4.84e-07!6;UBERON:0001178!4.84e-07!6 | |ontology_enrichment_uberon=UBERON:0002097!1.39e-11!40;UBERON:0002199!4.78e-10!45;UBERON:0002416!4.78e-10!45;UBERON:0003102!2.53e-08!95;UBERON:0003688!4.84e-07!6;UBERON:0002358!4.84e-07!6;UBERON:0003684!4.84e-07!6;UBERON:0001178!4.84e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0001136;7.62e-26;1!UBERON:0001343;7.62e-26;1!UBERON:0004910;7.62e-26;1!UBERON:0004813;7.62e-26;1!UBERON:0002199;1.21e-13;46!UBERON:0002416;1.21e-13;46!UBERON:0004909;1.21e-13;2!UBERON:0002097;1.79e-13;41!UBERON:0003102;1.92e-09;50!UBERON:0000014;1.80e-07;4!UBERON:0005904;1.80e-07;4!UBERON:0004797;1.80e-07;4!UBERON:0000415;1.80e-07;4!UBERON:0007240;1.80e-07;4!UBERON:0005742;1.80e-07;4!UBERON:0005734;1.80e-07;4!UBERON:0004664;1.80e-07;4!UBERON:0004663;1.80e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0001136;7.62e-26;1!UBERON:0001343;7.62e-26;1!UBERON:0004910;7.62e-26;1!UBERON:0004813;7.62e-26;1!UBERON:0002199;1.21e-13;46!UBERON:0002416;1.21e-13;46!UBERON:0004909;1.21e-13;2!UBERON:0002097;1.79e-13;41!UBERON:0003102;1.92e-09;50!UBERON:0000014;1.80e-07;4!UBERON:0005904;1.80e-07;4!UBERON:0004797;1.80e-07;4!UBERON:0000415;1.80e-07;4!UBERON:0007240;1.80e-07;4!UBERON:0005742;1.80e-07;4!UBERON:0005734;1.80e-07;4!UBERON:0004664;1.80e-07;4!UBERON:0004663;1.80e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,9.79e-26,1;UBERON:0001343,9.79e-26,1;UBERON:0004910,9.79e-26,1;UBERON:0005154,9.79e-26,1;UBERON:0005295,9.79e-26,1;UBERON:0004813,9.79e-26,1;UBERON:0005297,9.79e-26,1;UBERON:0005294,9.79e-26,1;UBERON:0010141,9.79e-26,1;UBERON:0005891,9.79e-26,1;UBERON:0002097,2.17e-15,41;UBERON:0002199,9.48e-14,46;UBERON:0002416,9.48e-14,46;UBERON:0004909,1.37e-13,2;UBERON:0000415,1.59e-07,4;UBERON:0007240,1.59e-07,4;UBERON:0005742,1.59e-07,4;UBERON:0005734,1.59e-07,4;UBERON:0004664,1.59e-07,4;UBERON:0004663,1.59e-07,4;UBERON:0005904,1.92e-07,4;UBERON:0000014,2.04e-07,4 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85372853138506,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0,0,0.113432183160021,1.61450672119976,3.20336083227851,0.423863802319124,0.300091096084402,0.618315175430633,5.66809188100384,2.79175284497385,0,0.0974370051611986,0,0.184099797284599,0,0,0.302256294682921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767309866440312,0,0.128139149255701,0.511707249066704,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616067160352178,0,0,0,0.143124886741991,0,0,0.38126038784765,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0.487426979262569,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24415835064723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288109595976299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80149941771202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.85372853138506,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0,0,0.113432183160021,1.61450672119976,3.20336083227851,0.423863802319124,0.300091096084402,0.618315175430633,5.66809188100384,2.79175284497385,0,0.0974370051611986,0,0.184099797284599,0,0,0.302256294682921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767309866440312,0,0.128139149255701,0.511707249066704,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.616067160352178,0,0,0,0.143124886741991,0,0,0.38126038784765,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0.487426979262569,0,0,0.141405431953713,0,0,0,0.438450885253763,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24415835064723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288109595976299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80149941771202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:172972632..172972638,+ | |short_description=p@chr1:172972632..172972638,+ | ||
}} | }} |
Revision as of 13:08, 19 November 2012
Short description: | p@chr1:172972632..172972638, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:172972632..172972638, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 9.79e-26 | 1 |
seminiferous tubule epithelial cell | 9.79e-26 | 1 |
Sertoli cell | 9.79e-26 | 1 |
skin fibroblast | 8.82e-18 | 23 |
fibroblast | 6.70e-12 | 76 |
hepatic stellate cell | 1.41e-09 | 3 |
fibroblast of tunica adventitia of artery | 1.59e-07 | 4 |
fibroblast of the aortic adventitia | 1.59e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 9.79e-26 | 1 |
seminiferous tubule of testis | 9.79e-26 | 1 |
epithelium of male gonad | 9.79e-26 | 1 |
epithelial cord | 9.79e-26 | 1 |
sex cord | 9.79e-26 | 1 |
seminiferous tubule epithelium | 9.79e-26 | 1 |
testis sex cord | 9.79e-26 | 1 |
genital ridge | 9.79e-26 | 1 |
primitive sex cord of indifferent gonad | 9.79e-26 | 1 |
coelomic epithelium | 9.79e-26 | 1 |
skin of body | 2.17e-15 | 41 |
integument | 9.48e-14 | 46 |
integumental system | 9.48e-14 | 46 |
epithelium of gonad | 1.37e-13 | 2 |
artery wall | 1.59e-07 | 4 |
tunica adventitia of artery | 1.59e-07 | 4 |
adventitia | 1.59e-07 | 4 |
tunica adventitia of blood vessel | 1.59e-07 | 4 |
aorta tunica adventitia | 1.59e-07 | 4 |
aorta wall | 1.59e-07 | 4 |
duct of male reproductive system | 1.92e-07 | 4 |
zone of skin | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 5.93e-26 | 1 |
basal cell carcinoma | 1.26e-25 | 1 |
musculoskeletal system disease | 8.13e-21 | 5 |
myotonic disease | 8.13e-21 | 5 |
muscle tissue disease | 8.13e-21 | 5 |
myopathy | 8.13e-21 | 5 |
muscular disease | 8.13e-21 | 5 |
myotonic dystrophy | 8.13e-21 | 5 |
mesenchymal cell neoplasm | 1.07e-13 | 2 |
skin carcinoma | 1.55e-13 | 2 |
skin cancer | 1.55e-13 | 2 |
integumentary system cancer | 1.55e-13 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.