FFCP PHASE1:Hg19::chr19:42038090..42038109,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0000037!7.11e-31!172;CL:0000566!7.11e-31!172;CL:0002031!1.59e-28!124;CL:0002032!4.25e-28!165;CL:0000837!4.25e-28!165;CL:0000542!5.77e-28!53;CL:0000051!5.77e-28!53;CL:0000738!6.34e-28!140;CL:0000988!1.22e-27!182;CL:0000838!8.64e-27!52;CL:0002087!9.29e-26!119;CL:0000945!1.39e-24!24;CL:0000826!1.39e-24!24;CL:0000236!8.64e-15!14;CL:0000763!2.37e-07!112;CL:0000049!2.37e-07!112 | |ontology_enrichment_celltype=CL:0000037!7.11e-31!172;CL:0000566!7.11e-31!172;CL:0002031!1.59e-28!124;CL:0002032!4.25e-28!165;CL:0000837!4.25e-28!165;CL:0000542!5.77e-28!53;CL:0000051!5.77e-28!53;CL:0000738!6.34e-28!140;CL:0000988!1.22e-27!182;CL:0000838!8.64e-27!52;CL:0002087!9.29e-26!119;CL:0000945!1.39e-24!24;CL:0000826!1.39e-24!24;CL:0000236!8.64e-15!14;CL:0000763!2.37e-07!112;CL:0000049!2.37e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000236;2.75e-27;13!CL:0000945;3.28e-27;24!CL:0000784;1.45e-17;3!CL:0000542;3.20e-10;53!CL:0000167;2.23e-07;1!CL:0000164;2.23e-07;1!CL:0000502;2.23e-07;1!CL:0000172;2.23e-07;1!CL:0000946;2.23e-07;1!CL:0000817;2.23e-07;1!CL:0000173;2.23e-07;1!CL:0000786;2.23e-07;1 | |ontology_enrichment_celltype_v019=CL:0000236;2.75e-27;13!CL:0000945;3.28e-27;24!CL:0000784;1.45e-17;3!CL:0000542;3.20e-10;53!CL:0000167;2.23e-07;1!CL:0000164;2.23e-07;1!CL:0000502;2.23e-07;1!CL:0000172;2.23e-07;1!CL:0000946;2.23e-07;1!CL:0000817;2.23e-07;1!CL:0000173;2.23e-07;1!CL:0000786;2.23e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.60e-32,14;CL:0000945,1.52e-27,24;CL:0000826,1.52e-27,24;CL:0000784,1.01e-17,3;CL:0000542,4.50e-16,53;CL:0000051,4.50e-16,53;CL:0000838,7.91e-14,52;CL:0000738,8.88e-13,136;CL:0002087,5.96e-11,115;CL:0000037,9.57e-11,168;CL:0002031,2.35e-10,120;CL:0000988,5.59e-10,177;CL:0000817,5.26e-09,3;CL:0002032,5.48e-09,161;CL:0000837,5.48e-09,161;CL:0000167,1.86e-07,1;CL:0000164,1.86e-07,1;CL:0000502,1.86e-07,1;CL:0000172,1.86e-07,1;CL:0000173,1.86e-07,1;CL:0002351,1.86e-07,1;CL:0000946,1.98e-07,1;CL:0000786,1.98e-07,1;CL:0000980,1.98e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000051;3.20e-10;53!CL:0002351;2.23e-07;1!UBERON:0005754;2.23e-07;1 | |ontology_enrichment_development_v019=CL:0000051;3.20e-10;53!CL:0002351;2.23e-07;1!UBERON:0005754;2.23e-07;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:12603;1.54e-07;1!DOID:630;1.74e-07;1!DOID:0050177;1.74e-07;1!DOID:0050427;1.74e-07;1!DOID:4430;2.23e-07;1 | |ontology_enrichment_disease_v019=DOID:12603;1.54e-07;1!DOID:630;1.74e-07;1!DOID:0050177;1.74e-07;1!DOID:0050427;1.74e-07;1!DOID:4430;2.23e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:12603,1.55e-07,1;DOID:630,1.75e-07,1;DOID:0050177,1.75e-07,1;DOID:0050427,1.75e-07,1;DOID:4430,1.86e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.69e-10!102;UBERON:0003061!2.69e-10!102;UBERON:0002193!1.09e-09!112;UBERON:0004177!2.23e-08!7 | |ontology_enrichment_uberon=UBERON:0002390!2.69e-10!102;UBERON:0003061!2.69e-10!102;UBERON:0002193!1.09e-09!112;UBERON:0004177!2.23e-08!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000998;2.23e-07;1!UBERON:0006868;2.23e-07;1!UBERON:0002372;5.60e-07;1!UBERON:0001961;5.60e-07;1!UBERON:0001744;5.60e-07;1!UBERON:0001042;5.60e-07;1!UBERON:0001735;5.60e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0000998;2.23e-07;1!UBERON:0006868;2.23e-07;1!UBERON:0002372;5.60e-07;1!UBERON:0001961;5.60e-07;1!UBERON:0001744;5.60e-07;1!UBERON:0001042;5.60e-07;1!UBERON:0001735;5.60e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,2.37e-07,1;UBERON:0006868,2.37e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993374274723366,0.903106483949403,0.944529375764151,0.393364276848904,0,0,0,0,0,0.92960640696362,0.142169232487422,0,0,0.200544447470142,0,0.223915474239924,0.32389366601898,0,0,0,0.242584061187816,0,0.411167888021826,0.309706370895104,0.863077176966451,0.256160706529101,0.236482229888585,0.344745680736619,1.93645405075148,4.06279459783025,0,0.272906150057846,0.224723484445085,0,0,0.639337125799041,0,0,0,0,0,0.622822248995575,0,0.521482918420201,0.65156653411535,0,0.368277635987565,0.632924774881769,0,0,0,0,0,0,0,0,0,1.75996244461323,1.63841583378639,0,0.853460445133014,2.00197993518006,2.29900975981793,1.98313461835459,1.90810750907073,1.70763890732835,0.587237189370939,0.382273228125229,1.32171328579026,0,0.263384084775077,0.786839080455332,0,0.822405995998037,0.668745981562712,0.977766799900771,0.946895611469467,0,1.22551502573691,0.883817722424512,0.443067789167242,0,0.384273959177026,0.260118695119756,1.15106533222573,0.829050053357545,0,0,0.267540828089713,1.04535523804977,1.13309342697566,0.383220493601921,0.68725489096526,0.759059076058509,0,0,0,0,0.383959833463255,0,0.236777252044017,0.821127996921047,0.403213486449465,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,1.90792499444274,1.14398982156026,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,20.1991927537337,0.880484340132261,0.207328115540772,0.144119953416961,0.88369703398466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0.448340575974109,1.37921532141349,0.646882724578552,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0.106727557803444,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0.522870902049801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,2.29391162142713,1.70894156152249,0.238231775457789,0.822724546172388,0,0,0,0.213648142254946,0,0,6.68891430452587,2.01976898167023,0,0,0.199579371432817,0.191505370132367,0.211673582723883,0,0.561594356226918,0.228234679033192,0,0,0,0.321176150207399,0,0,0,0,0,0,0,0,0,0,0.33307196799782,1.4098700508785,0,0.146508179271894,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0.861593638227486,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0.583209226766509,0,0,0,0,0,0,0,0.435753854075961,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.156980256395025,0.332423363800313,0,0,0,0,0.476809736941136,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0.182454789215666,0,0,0.394584402849391,0,0,0.126373159256976,1.50323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.387956065953678,0,0,0,0,0,0,0,0.213452994739353,0,0.576361668616424,0,0,0.720273989940749,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0.136203406111576,0,0,0,0.449947783103001,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.738832686744051,0,0.113312091520126,0,0,0.258565912723101,0,0.171086837884329,0,0.320362237703084,0.314408610199332,0.414239055347196,0.496166021811951,0.395223263795889,1.70509637733254,0,0,0.2506898940227,0.306345576763462,0,0.157054096250234,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0.106691729694141,0.172214979660816,0,0.368211900503681,0,0,0,0,0.471797825567689,0,0,0,0,0,0,1.26178792002005,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65038171378292,0,0.0679697329768317,0,0,0,0.078493092850514,0,0.280272163313789,0,1.07963795609311,0.47775168788705,0.0714765441766563,0,0,0,0,0,0,0,0.860454717640555,0,0,2.11693525095465,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0.301925687133347,0.154348316215889,0.218559560503957,0,0,2.82811856521951,0,0,0,0,0.281951753939561,0.902410431630081,0.499705779624645,0,0,0,0,0.458729283404541,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0.18378979906969,0.250707539292375,0,0,0,0,0.426467963801962,0,0.839655827868079,1.98639085746745,0,0,0,0,0,1.01028079521881,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,3.52625341533556 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993374274723366,0.903106483949403,0.944529375764151,0.393364276848904,0,0,0,0,0,0.92960640696362,0.142169232487422,0,0,0.200544447470142,0,0.223915474239924,0.32389366601898,0,0,0,0.242584061187816,0,0.411167888021826,0.309706370895104,0.863077176966451,0.256160706529101,0.236482229888585,0.344745680736619,1.93645405075148,4.06279459783025,0,0.272906150057846,0.224723484445085,0,0,0.639337125799041,0,0,0,0,0,0.622822248995575,0,0.521482918420201,0.65156653411535,0,0.368277635987565,0.632924774881769,0,0,0,0,0,0,0,0,0,1.75996244461323,1.63841583378639,0,0.853460445133014,2.00197993518006,2.29900975981793,1.98313461835459,1.90810750907073,1.70763890732835,0.587237189370939,0.382273228125229,1.32171328579026,0,0.263384084775077,0.786839080455332,0,0.822405995998037,0.668745981562712,0.977766799900771,0.946895611469467,0,1.22551502573691,0.883817722424512,0.443067789167242,0,0.384273959177026,0.260118695119756,1.15106533222573,0.829050053357545,0,0,0.267540828089713,1.04535523804977,1.13309342697566,0.383220493601921,0.68725489096526,0.759059076058509,0,0,0,0,0.383959833463255,0,0.236777252044017,0.821127996921047,0.403213486449465,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,1.90792499444274,1.14398982156026,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,20.1991927537337,0.880484340132261,0.207328115540772,0.144119953416961,0.88369703398466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0.448340575974109,1.37921532141349,0.646882724578552,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0.106727557803444,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0.522870902049801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0.507447609232169,2.29391162142713,1.70894156152249,0.238231775457789,0.822724546172388,0,0,0,0.213648142254946,0,0,6.68891430452587,2.01976898167023,0,0,0.199579371432817,0.191505370132367,0.211673582723883,0,0.561594356226918,0.228234679033192,0,0,0,0.321176150207399,0,0,0,0,0,0,0,0,0,0,0.33307196799782,1.4098700508785,0,0.146508179271894,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0.861593638227486,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0.583209226766509,0,0,0,0,0,0,0,0.435753854075961,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.156980256395025,0.332423363800313,0,0,0,0,0.476809736941136,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0.182454789215666,0,0,0.394584402849391,0,0,0.126373159256976,1.50323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.387956065953678,0,0,0,0,0,0,0,0.213452994739353,0,0.576361668616424,0,0,0.720273989940749,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0.136203406111576,0,0,0,0.449947783103001,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.738832686744051,0,0.113312091520126,0,0,0.258565912723101,0,0.171086837884329,0,0.320362237703084,0.314408610199332,0.414239055347196,0.496166021811951,0.395223263795889,1.70509637733254,0,0,0.2506898940227,0.306345576763462,0,0.157054096250234,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0.106691729694141,0.172214979660816,0,0.368211900503681,0,0,0,0,0.471797825567689,0,0,0,0,0,0,1.26178792002005,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65038171378292,0,0.0679697329768317,0,0,0,0.078493092850514,0,0.280272163313789,0,1.07963795609311,0.47775168788705,0.0714765441766563,0,0,0,0,0,0,0,0.860454717640555,0,0,2.11693525095465,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0.301925687133347,0.154348316215889,0.218559560503957,0,0,2.82811856521951,0,0,0,0,0.281951753939561,0.902410431630081,0.499705779624645,0,0,0,0,0.458729283404541,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0.18378979906969,0.250707539292375,0,0,0,0,0.426467963801962,0,0.839655827868079,1.98639085746745,0,0,0,0,0,1.01028079521881,0.0717222053926763,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,3.52625341533556 | ||
|short_description=p@chr19:42038090..42038109,+ | |short_description=p@chr19:42038090..42038109,+ | ||
}} | }} |
Revision as of 20:18, 20 November 2012
Short description: | p@chr19:42038090..42038109, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:42038090..42038109, + |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.60e-32 | 14 |
lymphocyte of B lineage | 1.52e-27 | 24 |
pro-B cell | 1.52e-27 | 24 |
plasmacytoid dendritic cell | 1.01e-17 | 3 |
lymphocyte | 4.50e-16 | 53 |
common lymphoid progenitor | 4.50e-16 | 53 |
lymphoid lineage restricted progenitor cell | 7.91e-14 | 52 |
leukocyte | 8.88e-13 | 136 |
nongranular leukocyte | 5.96e-11 | 115 |
hematopoietic stem cell | 9.57e-11 | 168 |
hematopoietic lineage restricted progenitor cell | 2.35e-10 | 120 |
hematopoietic cell | 5.59e-10 | 177 |
precursor B cell | 5.26e-09 | 3 |
hematopoietic oligopotent progenitor cell | 5.48e-09 | 161 |
hematopoietic multipotent progenitor cell | 5.48e-09 | 161 |
peptide hormone secreting cell | 1.86e-07 | 1 |
enteroendocrine cell | 1.86e-07 | 1 |
type D enteroendocrine cell | 1.86e-07 | 1 |
somatostatin secreting cell | 1.86e-07 | 1 |
pancreatic D cell | 1.86e-07 | 1 |
progenitor cell of endocrine pancreas | 1.86e-07 | 1 |
antibody secreting cell | 1.98e-07 | 1 |
plasma cell | 1.98e-07 | 1 |
plasmablast | 1.98e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 2.37e-07 | 1 |
seminal fluid secreting gland | 2.37e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 1.55e-07 | 1 |
genetic disease | 1.75e-07 | 1 |
monogenic disease | 1.75e-07 | 1 |
xeroderma pigmentosum | 1.75e-07 | 1 |
somatostatinoma | 1.86e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.