FFCP PHASE1:Hg19::chr3:48519267..48519301,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0000039!2.01e-43!7;CL:0000586!2.01e-43!7 | |ontology_enrichment_celltype=CL:0000039!2.01e-43!7;CL:0000586!2.01e-43!7 | ||
|ontology_enrichment_celltype_v019=CL:0000039;4.48e-100;7!CL:0000586;4.48e-100;7!CL:0000771;1.65e-15;2!CL:0000083;2.03e-08;4 | |ontology_enrichment_celltype_v019=CL:0000039;4.48e-100;7!CL:0000586;4.48e-100;7!CL:0000771;1.65e-15;2!CL:0000083;2.03e-08;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,5.50e-100,7;CL:0000586,5.50e-100,7;CL:0000771,1.78e-15,2;CL:0000083,1.82e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.35e-45;10!UBERON:0005564;2.35e-45;10 | |ontology_enrichment_development_v019=UBERON:0009117;2.35e-45;10!UBERON:0005564;2.35e-45;10 | ||
|ontology_enrichment_disease=DOID:3095!1.34e-23!22;DOID:2994!1.34e-23!22;DOID:1799!4.09e-10!1;DOID:10165!4.09e-10!1;DOID:1798!4.09e-10!1;DOID:0060060!1.06e-09!1;DOID:0060061!1.06e-09!1;DOID:8691!1.06e-09!1 | |ontology_enrichment_disease=DOID:3095!1.34e-23!22;DOID:2994!1.34e-23!22;DOID:1799!4.09e-10!1;DOID:10165!4.09e-10!1;DOID:1798!4.09e-10!1;DOID:0060060!1.06e-09!1;DOID:0060061!1.06e-09!1;DOID:8691!1.06e-09!1 | ||
|ontology_enrichment_disease_v019=DOID:3095;2.63e-32;22!DOID:2994;2.63e-32;22!DOID:1799;1.54e-29;1!DOID:10165;1.54e-29;1!DOID:1798;1.54e-29;1!DOID:1793;2.03e-08;4 | |ontology_enrichment_disease_v019=DOID:3095;2.63e-32;22!DOID:2994;2.63e-32;22!DOID:1799;1.54e-29;1!DOID:10165;1.54e-29;1!DOID:1798;1.54e-29;1!DOID:1793;2.03e-08;4 | ||
|ontology_enrichment_disease_v019_2=DOID:3095,2.81e-32,22;DOID:2994,2.81e-32,22;DOID:1799,9.99e-30,1;DOID:10165,9.99e-30,1;DOID:1798,9.99e-30,1;DOID:1793,1.82e-08,4;DOID:0050687,2.45e-07,143;DOID:305,5.56e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.63e-17!8;UBERON:0003135!8.60e-13!11;UBERON:0003978!2.85e-12!3;UBERON:0009751!2.85e-12!3;UBERON:0000946!2.85e-12!3;UBERON:0002523!2.85e-12!3;UBERON:0005983!2.85e-12!3;UBERON:0002165!2.85e-12!3;UBERON:0002062!2.85e-12!3;UBERON:0007280!2.85e-12!3;UBERON:0000991!4.89e-10!21;UBERON:0009196!4.89e-10!21;UBERON:0009117!4.89e-10!21;UBERON:0005564!4.89e-10!21;UBERON:0002146!7.50e-10!1;UBERON:0005623!7.50e-10!1;UBERON:0002135!8.17e-10!1;UBERON:0004176!1.43e-09!22 | |ontology_enrichment_uberon=UBERON:0000473!1.63e-17!8;UBERON:0003135!8.60e-13!11;UBERON:0003978!2.85e-12!3;UBERON:0009751!2.85e-12!3;UBERON:0000946!2.85e-12!3;UBERON:0002523!2.85e-12!3;UBERON:0005983!2.85e-12!3;UBERON:0002165!2.85e-12!3;UBERON:0002062!2.85e-12!3;UBERON:0007280!2.85e-12!3;UBERON:0000991!4.89e-10!21;UBERON:0009196!4.89e-10!21;UBERON:0009117!4.89e-10!21;UBERON:0005564!4.89e-10!21;UBERON:0002146!7.50e-10!1;UBERON:0005623!7.50e-10!1;UBERON:0002135!8.17e-10!1;UBERON:0004176!1.43e-09!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.74e-56;8!UBERON:0003135;2.64e-41;11!UBERON:0000991;5.63e-22;21!UBERON:0003101;5.25e-21;22!UBERON:0000079;5.25e-21;22!UBERON:0002323;1.38e-14;45!UBERON:0002553;2.06e-09;52!UBERON:0004458;3.98e-09;48!UBERON:0003133;3.14e-08;44!UBERON:0000922;5.94e-08;49 | |ontology_enrichment_uberon_v019=UBERON:0000473;1.74e-56;8!UBERON:0003135;2.64e-41;11!UBERON:0000991;5.63e-22;21!UBERON:0003101;5.25e-21;22!UBERON:0000079;5.25e-21;22!UBERON:0002323;1.38e-14;45!UBERON:0002553;2.06e-09;52!UBERON:0004458;3.98e-09;48!UBERON:0003133;3.14e-08;44!UBERON:0000922;5.94e-08;49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.16e-56,8;UBERON:0003135,3.09e-41,11;UBERON:0000991,6.11e-22,21;UBERON:0009196,6.11e-22,21;UBERON:0009117,6.11e-22,21;UBERON:0005564,6.11e-22,21;UBERON:0004176,5.68e-21,22;UBERON:0003101,5.68e-21,22;UBERON:0000079,5.68e-21,22;UBERON:0002323,1.06e-15,46;UBERON:0004458,9.13e-15,49;UBERON:0003886,1.96e-13,54;UBERON:0002553,6.21e-12,61;UBERON:0003133,6.61e-10,48;UBERON:0005156,3.84e-08,59;UBERON:0000990,3.84e-08,59 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.91958637459702,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.458320848023367,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92860041722134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.218531143927391,0,3.87557553019531,1.06886962106224,4.68663987627709,1.75495277504663,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.91958637459702,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.458320848023367,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92860041722134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0.218531143927391,0,3.87557553019531,1.06886962106224,4.68663987627709,1.75495277504663,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr3:48519267..48519301,- | |short_description=p@chr3:48519267..48519301,- | ||
}} | }} |
Revision as of 20:52, 20 November 2012
Short description: | p@chr3:48519267..48519301, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:48519267..48519301, - |
Coexpression cluster: | C267_pancreatic_placenta_choriocarcinoma_testicular_teratocarcinoma_chorionic_clear |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 5.50e-100 | 7 |
germ cell | 5.50e-100 | 7 |
eosinophil | 1.78e-15 | 2 |
epithelial cell of pancreas | 1.82e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
testis | 2.16e-56 | 8 |
male reproductive organ | 3.09e-41 | 11 |
gonad | 6.11e-22 | 21 |
indifferent external genitalia | 6.11e-22 | 21 |
indifferent gonad | 6.11e-22 | 21 |
gonad primordium | 6.11e-22 | 21 |
external genitalia | 5.68e-21 | 22 |
male organism | 5.68e-21 | 22 |
male reproductive system | 5.68e-21 | 22 |
body cavity | 1.06e-15 | 46 |
body cavity or lining | 9.13e-15 | 49 |
body cavity precursor | 1.96e-13 | 54 |
anatomical cavity | 6.21e-12 | 61 |
reproductive organ | 6.61e-10 | 48 |
reproductive structure | 3.84e-08 | 59 |
reproductive system | 3.84e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.81e-32 | 22 |
germ cell cancer | 2.81e-32 | 22 |
islet cell tumor | 9.99e-30 | 1 |
endocrine pancreas cancer | 9.99e-30 | 1 |
pancreatic endocrine carcinoma | 9.99e-30 | 1 |
pancreatic cancer | 1.82e-08 | 4 |
cell type cancer | 2.45e-07 | 143 |
carcinoma | 5.56e-07 | 106 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.