FFCP PHASE1:Mm9::chr12:16807750..16807761,-: Difference between revisions
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|id=chr12:16807750..16807761,- | |id=chr12:16807750..16807761,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005156!1.45e-09!26;UBERON:0000990!1.45e-09!26;UBERON:0003133!1.97e-09!24;UBERON:0002342!5.58e-09!10;UBERON:0005062!5.58e-09!10;UBERON:0000991!4.89e-08!18;UBERON:0005564!4.89e-08!18;UBERON:0004176!2.22e-07!17;UBERON:0009196!2.22e-07!17;UBERON:0009117!2.22e-07!17 | |ontology_enrichment_uberon=UBERON:0005156!1.45e-09!26;UBERON:0000990!1.45e-09!26;UBERON:0003133!1.97e-09!24;UBERON:0002342!5.58e-09!10;UBERON:0005062!5.58e-09!10;UBERON:0000991!4.89e-08!18;UBERON:0005564!4.89e-08!18;UBERON:0004176!2.22e-07!17;UBERON:0009196!2.22e-07!17;UBERON:0009117!2.22e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003133,1.08e-26,24;UBERON:0004176,1.60e-25,17;UBERON:0009196,1.60e-25,17;UBERON:0009117,1.60e-25,17;UBERON:0005156,1.55e-24,26;UBERON:0000990,1.55e-24,26;UBERON:0000991,4.73e-24,18;UBERON:0005564,4.73e-24,18;UBERON:0000473,6.12e-19,14;UBERON:0003135,1.22e-17,15;UBERON:0003101,1.68e-16,16;UBERON:0000079,1.68e-16,16;UBERON:0003134,2.09e-11,8;UBERON:0002323,3.63e-11,37;UBERON:0004458,3.63e-11,37;UBERON:0003886,7.62e-11,38;UBERON:0002553,1.54e-10,39;UBERON:0000474,3.66e-10,9;UBERON:0000992,2.18e-08,3;UBERON:0003100,2.39e-08,11;UBERON:0000926,2.53e-07,120;UBERON:0004120,2.53e-07,120;UBERON:0006603,2.53e-07,120;UBERON:0000305,3.14e-07,1;UBERON:0000996,7.89e-07,1 | |||
|phase1_expression=0,0,0,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0.159992422793407,0,0,0,0.215471232685889,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.550640256485045,0,0,0.439372365468944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454357159999104,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82040064223167,0.173485326766136,0.608930956624282,0.230615497256059,0.904335843315735,1.05829836422134,0.376999773989026,4.6967043869531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0.252722758433675,0,0,0.689706313300419,0.360124259610698,0.30140963567143,0.204109497453984,0.2562274405697,0.0937017245597288,0,0,0,0,0.219195732427575,0,0,0,0.398068533636986,0,0,0,0.414251545071004,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0.426576501070468,0,0.644337306610467,0.201683524623343,0.444756087689741,0.190225626112559,0,0.329397909448022,0,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0.571242563048644,0,0.203651327845314,0.193952487167626,0.210407459670956,0,0,0,0,0,0.667380422864376,0.196558995113203,0.449724224769707,0.405720242777006,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0.238043640886014,0.195133647857799,0,0,0.478364305972461,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0.780877488593277,1.07711698866399,0.238968797952552,0.445597348164788,0.849229592366497,0,0,0.395287777946524,0,7.80670468645477,1.06839362200353,0.488660878060728,0.659880491890142,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,1.36175842301515,0,0,0,0.354680467284547,0,0.164549020602121,0.304464949114599,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138199973804424,0,0.316335993581135,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,1.19613236835183,1.48912641411388,2.13896307178452,2.19571699912143,2.19642963138012,3.63807439801837,1.3020438484395,0.209718688851422,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,2.01466786693992,1.71494703263253,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0,0,0.209613162627982,0.367687016900028,0,0,0.320919209591815,0,0.50695859978048,0.188626341386076,0,0.256100609619477,0.17230640686684,0.476293691283074,0.115884325944855,0.192909220463705,0.412085900803307,0,0,0.177475806159338,0,0,0,0.0846146078916765,0.365855945745545,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,0.159992422793407,0,0,0,0.215471232685889,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0.251793635951155,0.101376931219515,0.550640256485045,0,0,0.439372365468944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454357159999104,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82040064223167,0.173485326766136,0.608930956624282,0.230615497256059,0.904335843315735,1.05829836422134,0.376999773989026,4.6967043869531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0.252722758433675,0,0,0.689706313300419,0.360124259610698,0.30140963567143,0.204109497453984,0.2562274405697,0.0937017245597288,0,0,0,0,0.219195732427575,0,0,0,0.398068533636986,0,0,0,0.414251545071004,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0.426576501070468,0,0.644337306610467,0.201683524623343,0.444756087689741,0.190225626112559,0,0.329397909448022,0,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0.571242563048644,0,0.203651327845314,0.193952487167626,0.210407459670956,0,0,0,0,0,0.667380422864376,0.196558995113203,0.449724224769707,0.405720242777006,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0.238043640886014,0.195133647857799,0,0,0.478364305972461,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0.780877488593277,1.07711698866399,0.238968797952552,0.445597348164788,0.849229592366497,0,0,0.395287777946524,0,7.80670468645477,1.06839362200353,0.488660878060728,0.659880491890142,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0,0,0,0,0,0,0,1.36175842301515,0,0,0,0.354680467284547,0,0.164549020602121,0.304464949114599,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138199973804424,0,0.316335993581135,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,1.19613236835183,1.48912641411388,2.13896307178452,2.19571699912143,2.19642963138012,3.63807439801837,1.3020438484395,0.209718688851422,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,2.01466786693992,1.71494703263253,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0,0,0.209613162627982,0.367687016900028,0,0,0.320919209591815,0,0.50695859978048,0.188626341386076,0,0.256100609619477,0.17230640686684,0.476293691283074,0.115884325944855,0.192909220463705,0.412085900803307,0,0,0.177475806159338,0,0,0,0.0846146078916765,0.365855945745545,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@Greb1 | |short_description=p5@Greb1 | ||
}} | }} |
Revision as of 18:47, 13 November 2012
Short description: | p5@Greb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Greb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1101 |
Association with transcript: | -58bp_to_ENSMUST00000048064, ENSMUST00000161998, NM_015764, uc007nbz.1_5end |
EntrezGene: | Greb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
reproductive organ | 1.08e-26 | 24 |
external genitalia | 1.60e-25 | 17 |
indifferent external genitalia | 1.60e-25 | 17 |
indifferent gonad | 1.60e-25 | 17 |
reproductive structure | 1.55e-24 | 26 |
reproductive system | 1.55e-24 | 26 |
gonad | 4.73e-24 | 18 |
gonad primordium | 4.73e-24 | 18 |
testis | 6.12e-19 | 14 |
male reproductive organ | 1.22e-17 | 15 |
male organism | 1.68e-16 | 16 |
male reproductive system | 1.68e-16 | 16 |
female reproductive organ | 2.09e-11 | 8 |
body cavity | 3.63e-11 | 37 |
body cavity or lining | 3.63e-11 | 37 |
body cavity precursor | 7.62e-11 | 38 |
anatomical cavity | 1.54e-10 | 39 |
female reproductive system | 3.66e-10 | 9 |
female gonad | 2.18e-08 | 3 |
female organism | 2.39e-08 | 11 |
mesoderm | 2.53e-07 | 120 |
mesoderm-derived structure | 2.53e-07 | 120 |
presumptive mesoderm | 2.53e-07 | 120 |
amnion | 3.14e-07 | 1 |
vagina | 7.89e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.