FFCP PHASE1:Mm9::chr7:16880468..16880502,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:16880468..16880502,+|id=chr7:16880468..16880502,+|ontology_enrichment_celltype=CL:0000988!1.32e-14!32;CL:0002032!1.32e-14!32;CL:0000037!1.32e-14!32;CL:0000566!1.32e-14!32;CL:0000837!1.32e-14!32;CL:0002320!7.71e-13!46;CL:0000134!7.71e-13!46;CL:0000838!6.62e-12!12;CL:0002031!1.50e-11!25;CL:0000084!7.85e-11!11;CL:0000827!7.85e-11!11;CL:0000219!8.92e-11!54;CL:0000542!1.15e-10!13;CL:0000051!1.15e-10!13;CL:0000738!1.93e-10!17;CL:0002087!1.93e-10!17;CL:0000063!8.01e-10!66;CL:0000791!1.34e-09!9;CL:0000789!1.34e-09!9;CL:0002420!1.34e-09!9;CL:0002419!1.34e-09!9;CL:0000790!1.34e-09!9;CL:0000624!1.20e-08!8;CL:0000034!1.21e-08!97;CL:0000723!1.53e-07!91;CL:0000048!1.53e-07!91;CL:0000144!2.53e-07!121;CL:0000012!2.53e-07!121;CL:0002371!9.32e-07!118;CL:0000893!9.82e-07!6;CL:0002489!9.82e-07!6;CL:0000898!9.82e-07!6;CL:0000809!9.82e-07!6;CL:0000810!9.82e-07!6;CL:0000895!9.82e-07!6;CL:0000808!9.82e-07!6;CL:0000894!9.82e-07!6;CL:0000806!9.82e-07!6;CL:0000807!9.82e-07!6;CL:0000805!9.82e-07!6;CL:0002425!9.82e-07!6;CL:0002436!9.82e-07!6;CL:0002427!9.82e-07!6;CL:0002428!9.82e-07!6;CL:0002429!9.82e-07!6;CL:0002433!9.82e-07!6;CL:0002431!9.82e-07!6;CL:0002432!9.82e-07!6|ontology_enrichment_celltype_v019_2=CL:0000988,2.49e-12,32;CL:0002032,2.49e-12,32;CL:0000037,2.49e-12,32;CL:0000837,2.49e-12,32;CL:0000213,2.59e-12,1;CL:0002078,2.59e-12,1;CL:0000115,2.59e-12,1;CL:0002262,2.59e-12,1;CL:1000398,2.59e-12,1;CL:0000945,3.34e-12,1;CL:0000236,3.34e-12,1;CL:0000826,3.34e-12,1;CL:0002320,1.31e-11,46;CL:0000134,1.31e-11,46;CL:0000219,6.99e-10,54;CL:0000049,1.25e-09,19;CL:0000557,3.27e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!7.71e-13!46|ontology_enrichment_uberon_v019_2=UBERON:0002394,2.59e-12,1;UBERON:0001281,2.59e-12,1;UBERON:0000353,2.59e-12,1;UBERON:0003497,2.59e-12,1;UBERON:0003909,2.59e-12,1;UBERON:0003928,2.59e-12,1;UBERON:0003835,2.59e-12,1;UBERON:0003513,2.59e-12,1;UBERON:0001280,2.59e-12,1;UBERON:0004647,2.59e-12,1;UBERON:0002294,2.59e-12,1;UBERON:0001173,2.59e-12,1;UBERON:0004912,2.59e-12,1;UBERON:0005171,2.59e-12,1;UBERON:0002384,1.31e-11,46|phase1_expression=0,0.348975407639361,0,0.60492842261366,0,0.33575854382378,0.233612640595526,0.645616617207881,0.563154888606667,0.70219357896598,1.19852577757853,0.478632953972018,0.342401459862411,0.34968160967599,0.333109761815663,0.202475267389826,0,0,0.274228867211478,0,0,0.297872853602656,0.261199789138935,0.159992422793407,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0.288851619751275,0,0,0,0.7813353445238,0.523523743973798,9.99993529652724,0.683045484958446,0,0.125896817975577,0.202753862439029,0.183546752161682,0,0,0,0,0,0,1.67782606057736,0.725362142011344,0.672187598284928,0.257259436035947,0,0.515672092277442,0,0,0,0.338844532069132,0.889294796111139,0.449949858640699,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,1.73918693221007,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0,0.117588707135705,0,0,0.144599356919912,0.884610551949874,0.323533699894818,0,0,0,0.292780797011547,0,0,0.479260498023681,3.59941638596045,1.01656181658452,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,3.08817488537658,0.568326998791185,0,0,0,0,0.196764231747404,0,0.232533944750408,0,0.116765342367169,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0.224862112384854,0,0,0.25462585178142,0,0.486405680325106,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0,0,0.345369963731791,0,1.50791283939272,0,0,0,0,0,0.655739781506702,0.252470927204373,0.315508219416257,0,0.430846795465598,0.238968797952552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0.178368817602071,0,0,0.23467170806371,0,0.441056796109924,0,0.161464426695906,0.120625849856312,0,0.164140899745061,0,0,0.854354403989263,0.206386867963223,0.555583582109135,0.188368457004691,0,0.228778173206523,0,0.69975726161829,0.138199973804424,0,0,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0,0,0,0,0,0,0.15241361331,0,0,0,0,0.226730383615211,0,0.0897138566094757,0.335769232728157,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0|short_description=p@chr7:16880468..16880502,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:16880468..16880502,+ | |||
|id=chr7:16880468..16880502,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.32e-14!32;CL:0002032!1.32e-14!32;CL:0000037!1.32e-14!32;CL:0000566!1.32e-14!32;CL:0000837!1.32e-14!32;CL:0002320!7.71e-13!46;CL:0000134!7.71e-13!46;CL:0000838!6.62e-12!12;CL:0002031!1.50e-11!25;CL:0000084!7.85e-11!11;CL:0000827!7.85e-11!11;CL:0000219!8.92e-11!54;CL:0000542!1.15e-10!13;CL:0000051!1.15e-10!13;CL:0000738!1.93e-10!17;CL:0002087!1.93e-10!17;CL:0000063!8.01e-10!66;CL:0000791!1.34e-09!9;CL:0000789!1.34e-09!9;CL:0002420!1.34e-09!9;CL:0002419!1.34e-09!9;CL:0000790!1.34e-09!9;CL:0000624!1.20e-08!8;CL:0000034!1.21e-08!97;CL:0000723!1.53e-07!91;CL:0000048!1.53e-07!91;CL:0000144!2.53e-07!121;CL:0000012!2.53e-07!121;CL:0002371!9.32e-07!118;CL:0000893!9.82e-07!6;CL:0002489!9.82e-07!6;CL:0000898!9.82e-07!6;CL:0000809!9.82e-07!6;CL:0000810!9.82e-07!6;CL:0000895!9.82e-07!6;CL:0000808!9.82e-07!6;CL:0000894!9.82e-07!6;CL:0000806!9.82e-07!6;CL:0000807!9.82e-07!6;CL:0000805!9.82e-07!6;CL:0002425!9.82e-07!6;CL:0002436!9.82e-07!6;CL:0002427!9.82e-07!6;CL:0002428!9.82e-07!6;CL:0002429!9.82e-07!6;CL:0002433!9.82e-07!6;CL:0002431!9.82e-07!6;CL:0002432!9.82e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.49e-12,32;CL:0002032,2.49e-12,32;CL:0000037,2.49e-12,32;CL:0000837,2.49e-12,32;CL:0000213,2.59e-12,1;CL:0002078,2.59e-12,1;CL:0000115,2.59e-12,1;CL:0002262,2.59e-12,1;CL:1000398,2.59e-12,1;CL:0000945,3.34e-12,1;CL:0000236,3.34e-12,1;CL:0000826,3.34e-12,1;CL:0002320,1.31e-11,46;CL:0000134,1.31e-11,46;CL:0000219,6.99e-10,54;CL:0000049,1.25e-09,19;CL:0000557,3.27e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!7.71e-13!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,2.59e-12,1;UBERON:0001281,2.59e-12,1;UBERON:0000353,2.59e-12,1;UBERON:0003497,2.59e-12,1;UBERON:0003909,2.59e-12,1;UBERON:0003928,2.59e-12,1;UBERON:0003835,2.59e-12,1;UBERON:0003513,2.59e-12,1;UBERON:0001280,2.59e-12,1;UBERON:0004647,2.59e-12,1;UBERON:0002294,2.59e-12,1;UBERON:0001173,2.59e-12,1;UBERON:0004912,2.59e-12,1;UBERON:0005171,2.59e-12,1;UBERON:0002384,1.31e-11,46 | |||
|phase1_expression=0,0.348975407639361,0,0.60492842261366,0,0.33575854382378,0.233612640595526,0.645616617207881,0.563154888606667,0.70219357896598,1.19852577757853,0.478632953972018,0.342401459862411,0.34968160967599,0.333109761815663,0.202475267389826,0,0,0.274228867211478,0,0,0.297872853602656,0.261199789138935,0.159992422793407,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0.288851619751275,0,0,0,0.7813353445238,0.523523743973798,9.99993529652724,0.683045484958446,0,0.125896817975577,0.202753862439029,0.183546752161682,0,0,0,0,0,0,1.67782606057736,0.725362142011344,0.672187598284928,0.257259436035947,0,0.515672092277442,0,0,0,0.338844532069132,0.889294796111139,0.449949858640699,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,1.73918693221007,0,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0.304465478312141,0.230615497256059,0,0.117588707135705,0,0,0.144599356919912,0.884610551949874,0.323533699894818,0,0,0,0.292780797011547,0,0,0.479260498023681,3.59941638596045,1.01656181658452,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,3.08817488537658,0.568326998791185,0,0,0,0,0.196764231747404,0,0.232533944750408,0,0.116765342367169,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0.224862112384854,0,0,0.25462585178142,0,0.486405680325106,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0,0,0,0.345369963731791,0,1.50791283939272,0,0,0,0,0,0.655739781506702,0.252470927204373,0.315508219416257,0,0.430846795465598,0.238968797952552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0.177340233642274,0.178368817602071,0,0,0.23467170806371,0,0.441056796109924,0,0.161464426695906,0.120625849856312,0,0.164140899745061,0,0,0.854354403989263,0.206386867963223,0.555583582109135,0.188368457004691,0,0.228778173206523,0,0.69975726161829,0.138199973804424,0,0,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205421914329655,0,0,0,0,0,0,0.15241361331,0,0,0,0,0.226730383615211,0,0.0897138566094757,0.335769232728157,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p@chr7:16880468..16880502,+ | |||
}} |
Revision as of 12:33, 14 September 2013
Short description: | p@chr7:16880468..16880502, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:16880468..16880502, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.49e-12 | 32 |
hematopoietic oligopotent progenitor cell | 2.49e-12 | 32 |
hematopoietic stem cell | 2.49e-12 | 32 |
hematopoietic multipotent progenitor cell | 2.49e-12 | 32 |
lining cell | 2.59e-12 | 1 |
meso-epithelial cell | 2.59e-12 | 1 |
endothelial cell | 2.59e-12 | 1 |
endothelial cell of sinusoid | 2.59e-12 | 1 |
endothelial cell of hepatic sinusoid | 2.59e-12 | 1 |
lymphocyte of B lineage | 3.34e-12 | 1 |
B cell | 3.34e-12 | 1 |
pro-B cell | 3.34e-12 | 1 |
connective tissue cell | 1.31e-11 | 46 |
mesenchymal cell | 1.31e-11 | 46 |
motile cell | 6.99e-10 | 54 |
common myeloid progenitor | 1.25e-09 | 19 |
granulocyte monocyte progenitor cell | 3.27e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
bile duct | 2.59e-12 | 1 |
hepatic sinusoid | 2.59e-12 | 1 |
parenchyma | 2.59e-12 | 1 |
abdomen blood vessel | 2.59e-12 | 1 |
sinusoid | 2.59e-12 | 1 |
digestive system duct | 2.59e-12 | 1 |
abdominal segment blood vessel | 2.59e-12 | 1 |
trunk blood vessel | 2.59e-12 | 1 |
liver parenchyma | 2.59e-12 | 1 |
liver lobule | 2.59e-12 | 1 |
biliary system | 2.59e-12 | 1 |
biliary tree | 2.59e-12 | 1 |
biliary bud | 2.59e-12 | 1 |
hepatic duct | 2.59e-12 | 1 |
connective tissue | 1.31e-11 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.