FFCP PHASE1:Mm9::chr6:53989491..53989550,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=69993|HGNC=|MCL_coexpression_id=30|UniProt=|association_with_transcript=0bp_to_ENSMUST00000138930_5end|description=CAGE_peak_3_at_Chn2_5end|id=chr6:53989491..53989550,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004111!8.10e-10!122;UBERON:0000025!4.97e-09!114|ontology_enrichment_uberon_v019_2=UBERON:0011216,6.38e-09,194;UBERON:0004111,1.52e-08,122;UBERON:0000025,1.05e-07,114;UBERON:0002021,2.13e-07,10;UBERON:0000411,2.13e-07,10;UBERON:0001950,2.13e-07,10|phase1_expression=0.320297694209588,2.44282785347553,3.18499467572675,10.5862473957391,9.01612313903425,1.84667199103079,1.63528848416868,0,0,0,0,0,0,0,0.666219523631325,0.202475267389826,0,0,0.274228867211478,0.42438965179803,6.37824676133023,0.496454756004426,1.30599894569468,0.639969691173627,2.06468352960453,3.44539178469012,5.59990595006797,2.58565479223067,2.66032787238923,2.77233142735924,1.77384408524244,0,0,0,1.1554064790051,0.664938581433969,0.816677425049476,0.418531630736908,0,0,0,0.683045484958446,0,1.00717454380462,0.912392380975631,0.917733760808408,0,0,0.439372365468944,0,0,1.43752564364972,0,0,0.336093799142464,0.514518872071894,0.85960031981627,1.03134418455488,2.02316460859598,2.64495489636016,0.633831403506179,0,0,0,0,0,0.898800331555214,1.15265491596466,0.622137673850866,1.35005938331691,1.05162480675691,1.42825492201902,2.20868540951614,0.857435594504678,0.670918297127655,0,2.20231761998777,3.06449611404451,2.61131106535614,0.791317726381163,1.46380229763855,0,14.2383329490704,2.25105044012672,2.44477196442896,0.589257170947335,2.70506193518296,0.931997229126503,0.302904773332736,0.226714680320357,7.53647670624362,4.30211938490693,1.3599426674155,8.09554787456726,6.49776417447669,8.06448396775204,5.05599912474307,0,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0,5.48082622651488,0.517875767294343,1.03909497345377,1.21439728736295,0.913396434936424,0.922461989024234,0.753613202763113,1.17588707135705,0.879666139307728,0.247194967734374,0.289198713839823,0,2.42650274921114,1.10420759230197,1.93950101254089,0,179.474628568078,169.023492398458,2.81002760729451,0.718890747035522,0,0.127070227073065,1.04853447583376,2.28750301409313,0.879580464790051,3.99795936442236,3.06858548796397,4.36354893575076,2.75810147215188,0.712875546952214,1.7416975885413,0,1.47309299120532,0.260240885925407,0.689706313300419,0.360124259610698,1.9591626318643,1.49680298132921,2.8185018462667,2.52994656311268,2.84573707812917,0.215567992932842,0.945530400839096,1.75951124163949,0.43839146485515,0.556094498451196,0.348252166522167,1.4404749548556,2.18937693500343,0,0.257347907114715,0.568326998791185,0.207125772535502,0.234526059981096,1.2604344302271,0.23674473558521,1.18058539048442,0.308534225774757,0.465067889500816,1.07309360559848,0.700592054203017,0.658239399653922,0.985004784474571,1.37816976227955,1.16959989940266,1.09775057645525,0.536825675041487,0.630869845692382,2.46971069710283,6.60837565967596,4.49565963328025,0.213288250535234,0.464473343720877,0.902072229254653,0.605050573870028,1.33426826306922,0.951128130562796,3.79623249235609,0.988193728344065,2.76468729680296,1.39269530428806,1.9496408711912,2.69645822596266,2.59365659849633,4.58024928485045,0.758671603812327,0.228497025219458,0,1.22190796707189,0.969762435838129,2.31448205638051,4.17361145020098,4.57591458736767,3.92496819603437,3.33172342588861,7.70776830426587,0.333690211432188,0.196558995113203,0.674586337154561,0.811440485554012,1.4470629585145,1.2731292589071,1.15078454980324,1.62135226775035,4.66754402419738,11.5014565221884,8.55924179637558,11.5453939052387,16.1650481886152,6.27890947326693,4.3419916922703,1.84753190166605,1.89491411770485,1.30371981153621,1.52770577197669,1.40814148973101,0.670025029767263,1.6663054862021,3.31727201358258,2.20689201748667,3.5434350343804,2.55127629851979,1.47476983244164,3.45369963731791,2.4590339958857,0,0,0,0.551873492609465,1.9266070798535,3.5163505977661,0,1.26235463602186,0.631016438832513,1.17131623288992,0.215423397732799,0.238968797952552,0.668396022247182,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,4.17717711348349,1.13552068166615,1.24645922567079,1.14020871547503,1.81467135269789,0,0.242780636154981,0.302323556964751,0.377210159511796,0.590603785761546,0.614870295887855,1.80899805217755,1.09060118843252,0.712994756769443,0.632073515871632,0,0,1.70219802876894,1.08036656418786,0.646793418913773,1.92903331528433,1.06404140185364,2.31879462882692,2.30368628842969,0.304464949114599,0.469343416127421,0.21183207086382,12.3495902910779,0.98931751764888,0.161464426695906,1.20625849856312,1.3130957840345,1.80554989719567,5.24665505933731,1.48340241608408,0.341741761595705,0.619160603889667,0.370389054739423,0.188368457004691,0.136694227721025,0.228778173206523,0.339956859987711,0.279902904647316,0.276399947608848,6.68269432610579,0,1.42323626988794,1.62008011232702,2.29997125615916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| ||
|EntrezGene=69993 | |||
|HGNC= | |||
|MCL_coexpression_id=30 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000138930_5end | |||
|description=CAGE_peak_3_at_Chn2_5end | |||
|id=chr6:53989491..53989550,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!8.10e-10!122;UBERON:0000025!4.97e-09!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,6.38e-09,194;UBERON:0004111,1.52e-08,122;UBERON:0000025,1.05e-07,114;UBERON:0002021,2.13e-07,10;UBERON:0000411,2.13e-07,10;UBERON:0001950,2.13e-07,10 | |||
|phase1_expression=0.320297694209588,2.44282785347553,3.18499467572675,10.5862473957391,9.01612313903425,1.84667199103079,1.63528848416868,0,0,0,0,0,0,0,0.666219523631325,0.202475267389826,0,0,0.274228867211478,0.42438965179803,6.37824676133023,0.496454756004426,1.30599894569468,0.639969691173627,2.06468352960453,3.44539178469012,5.59990595006797,2.58565479223067,2.66032787238923,2.77233142735924,1.77384408524244,0,0,0,1.1554064790051,0.664938581433969,0.816677425049476,0.418531630736908,0,0,0,0.683045484958446,0,1.00717454380462,0.912392380975631,0.917733760808408,0,0,0.439372365468944,0,0,1.43752564364972,0,0,0.336093799142464,0.514518872071894,0.85960031981627,1.03134418455488,2.02316460859598,2.64495489636016,0.633831403506179,0,0,0,0,0,0.898800331555214,1.15265491596466,0.622137673850866,1.35005938331691,1.05162480675691,1.42825492201902,2.20868540951614,0.857435594504678,0.670918297127655,0,2.20231761998777,3.06449611404451,2.61131106535614,0.791317726381163,1.46380229763855,0,14.2383329490704,2.25105044012672,2.44477196442896,0.589257170947335,2.70506193518296,0.931997229126503,0.302904773332736,0.226714680320357,7.53647670624362,4.30211938490693,1.3599426674155,8.09554787456726,6.49776417447669,8.06448396775204,5.05599912474307,0,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0,5.48082622651488,0.517875767294343,1.03909497345377,1.21439728736295,0.913396434936424,0.922461989024234,0.753613202763113,1.17588707135705,0.879666139307728,0.247194967734374,0.289198713839823,0,2.42650274921114,1.10420759230197,1.93950101254089,0,179.474628568078,169.023492398458,2.81002760729451,0.718890747035522,0,0.127070227073065,1.04853447583376,2.28750301409313,0.879580464790051,3.99795936442236,3.06858548796397,4.36354893575076,2.75810147215188,0.712875546952214,1.7416975885413,0,1.47309299120532,0.260240885925407,0.689706313300419,0.360124259610698,1.9591626318643,1.49680298132921,2.8185018462667,2.52994656311268,2.84573707812917,0.215567992932842,0.945530400839096,1.75951124163949,0.43839146485515,0.556094498451196,0.348252166522167,1.4404749548556,2.18937693500343,0,0.257347907114715,0.568326998791185,0.207125772535502,0.234526059981096,1.2604344302271,0.23674473558521,1.18058539048442,0.308534225774757,0.465067889500816,1.07309360559848,0.700592054203017,0.658239399653922,0.985004784474571,1.37816976227955,1.16959989940266,1.09775057645525,0.536825675041487,0.630869845692382,2.46971069710283,6.60837565967596,4.49565963328025,0.213288250535234,0.464473343720877,0.902072229254653,0.605050573870028,1.33426826306922,0.951128130562796,3.79623249235609,0.988193728344065,2.76468729680296,1.39269530428806,1.9496408711912,2.69645822596266,2.59365659849633,4.58024928485045,0.758671603812327,0.228497025219458,0,1.22190796707189,0.969762435838129,2.31448205638051,4.17361145020098,4.57591458736767,3.92496819603437,3.33172342588861,7.70776830426587,0.333690211432188,0.196558995113203,0.674586337154561,0.811440485554012,1.4470629585145,1.2731292589071,1.15078454980324,1.62135226775035,4.66754402419738,11.5014565221884,8.55924179637558,11.5453939052387,16.1650481886152,6.27890947326693,4.3419916922703,1.84753190166605,1.89491411770485,1.30371981153621,1.52770577197669,1.40814148973101,0.670025029767263,1.6663054862021,3.31727201358258,2.20689201748667,3.5434350343804,2.55127629851979,1.47476983244164,3.45369963731791,2.4590339958857,0,0,0,0.551873492609465,1.9266070798535,3.5163505977661,0,1.26235463602186,0.631016438832513,1.17131623288992,0.215423397732799,0.238968797952552,0.668396022247182,0.283076530788832,0.404810701674894,0.292255857911312,0.395287777946524,4.17717711348349,1.13552068166615,1.24645922567079,1.14020871547503,1.81467135269789,0,0.242780636154981,0.302323556964751,0.377210159511796,0.590603785761546,0.614870295887855,1.80899805217755,1.09060118843252,0.712994756769443,0.632073515871632,0,0,1.70219802876894,1.08036656418786,0.646793418913773,1.92903331528433,1.06404140185364,2.31879462882692,2.30368628842969,0.304464949114599,0.469343416127421,0.21183207086382,12.3495902910779,0.98931751764888,0.161464426695906,1.20625849856312,1.3130957840345,1.80554989719567,5.24665505933731,1.48340241608408,0.341741761595705,0.619160603889667,0.370389054739423,0.188368457004691,0.136694227721025,0.228778173206523,0.339956859987711,0.279902904647316,0.276399947608848,6.68269432610579,0,1.42323626988794,1.62008011232702,2.29997125615916,5.24070152990826,3.64133735239016,6.86023682520288,4.18809507174447,3.6292192521702,2.4853572523477,0,0.299033092087958,0.165458490457098,0.194451188344048,0.387479470433193,0.337912250981556,0.469428954583016,1.3020438484395,0.734015410979976,0.241584120826006,0.576060012515731,0,0.405450430580328,0.513554785824136,0.649604114888975,0.358053391334963,0.198681354781265,0.240390899039938,0.147689527174577,0,0.228620419965,0.201652370273681,0.0974578807397524,0.192423683280659,0.233753804363138,0.453460767230423,0,0,0,3.67060228661162,1.50145980360946,2.01466786693992,1.92931541171159,6.0188652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| |||
|short_description=p3@Chn2 | |||
}} |
Revision as of 10:19, 14 September 2013
Short description: | p3@Chn2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Chn2_5end |
Coexpression cluster: | MCL_coexpression_mm9:30 |
Association with transcript: | 0bp_to_ENSMUST00000138930_5end |
EntrezGene: | Chn2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 6.38e-09 | 194 |
anatomical conduit | 1.52e-08 | 122 |
tube | 1.05e-07 | 114 |
occipital lobe | 2.13e-07 | 10 |
visual cortex | 2.13e-07 | 10 |
neocortex | 2.13e-07 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.