FFCP PHASE1:Mm9::chr3:90318840..90318898,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=20196|HGNC=|MCL_coexpression_id=1159|UniProt=P97352|association_with_transcript=158bp_to_ENSMUST00000107338_5end|description=CAGE_peak_1_at_S100a13_5end|id=chr3:90318840..90318898,+|ontology_enrichment_celltype=CL:0000219!2.81e-10!54;CL:0002320!1.92e-07!46;CL:0000134!1.92e-07!46|ontology_enrichment_celltype_v019_2=CL:0000219,2.81e-10,54;CL:0002320,1.92e-07,46;CL:0000134,1.92e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003081!4.61e-11!88;UBERON:0002204!4.38e-10!32;UBERON:0004535!3.29e-09!23;UBERON:0001009!3.29e-09!23;UBERON:0004872!8.62e-09!33;UBERON:0002384!1.92e-07!46;UBERON:0007100!2.05e-07!18;UBERON:0000948!2.05e-07!18;UBERON:0005498!2.05e-07!18;UBERON:0004140!2.05e-07!18;UBERON:0009881!2.05e-07!18;UBERON:0004141!2.05e-07!18;UBERON:0003084!2.05e-07!18;UBERON:0007005!2.05e-07!18;UBERON:0004139!2.05e-07!18;UBERON:0004291!2.05e-07!18;UBERON:0002193!2.40e-07!48;UBERON:0002390!6.85e-07!45;UBERON:0003061!6.85e-07!45|ontology_enrichment_uberon_v019_2=UBERON:0003081,7.42e-11,87;UBERON:0002204,4.38e-10,32;UBERON:0004535,3.29e-09,23;UBERON:0001009,3.29e-09,23;UBERON:0004872,8.62e-09,33;UBERON:0002384,1.92e-07,46;UBERON:0007100,2.05e-07,18;UBERON:0000948,2.05e-07,18;UBERON:0005498,2.05e-07,18;UBERON:0004140,2.05e-07,18;UBERON:0009881,2.05e-07,18;UBERON:0004141,2.05e-07,18;UBERON:0003084,2.05e-07,18;UBERON:0007005,2.05e-07,18;UBERON:0004139,2.05e-07,18;UBERON:0004291,2.05e-07,18;UBERON:0002193,2.40e-07,48;UBERON:0002405,2.40e-07,48;UBERON:0002390,6.85e-07,45;UBERON:0003061,6.85e-07,45|phase1_expression=18.2569685699465,5.93258192986914,6.3699893514535,2.41971369045464,3.50627010962443,10.5763941304491,11.2134067485852,52.0366993469552,5.77233760821834,6.08567768437183,1.19852577757853,1.43589886191606,34.924948905966,39.6888626982248,12.3250611871795,11.9460407759997,9.09430441566591,25.0792421459799,24.5434836154272,22.4926515452956,17.7740476415736,13.3049874609186,15.9331871374751,15.1992801653736,20.8762445771125,10.9104073181854,11.630573896295,9.9116767035509,17.4821545899864,16.1299283046356,10.6430645114546,3.17515336729816,6.1506478758457,0,2.88851619751275,3.65716219788683,2.04169356262369,136.859843250969,170.331105106188,133.498554713319,125.293306950606,140.024324416481,155.363312969969,26.5642285928468,25.3442328048786,22.3927037637251,57.1145681374069,56.4685155025357,46.1340983742391,58.1345398232107,40.3160894281044,38.8131923785423,28.5230430298152,47.1485392307374,43.6921938885203,68.4310099855619,71.9198934246279,71.162748734287,1.21389876515759,2.11596391708813,1.90149421051854,36.5952094634663,32.014612660001,73.341826958434,104.819834432099,93.0728950579391,68.0092250876779,66.8539851259505,2.28117147078651,2.70011876663381,2.3135745748652,21.9951257990929,26.7250934551452,3.42974237801871,2.68367318851062,3.67687514644008,26.4278114398533,16.2162919368188,16.2822925251618,1.45074916503213,2.47016637726506,3.12548022334056,28.4766658981409,31.5147061617741,19.8637722109853,9.72274332063103,10.2507610175354,2.79599168737951,10.9802980333117,32.3446277257042,64.9296454691758,45.6024654800135,6.79971333707751,13.4925797909454,19.4932925234301,22.4013443548668,22.4711072210803,54.8785638701346,88.0674555603725,65.7211608589233,13.0984380392313,42.3477375467249,15.2883143823987,21.3320010945999,18.8347205679756,21.7889484308585,16.6823066854878,14.5013527243206,19.1614033898907,13.0629082377046,8.84775166507293,11.8741536541735,9.91646638201052,10.0984169170257,7.4080885495494,14.2003248202533,21.0115722574218,30.2212655962615,15.0383793831479,12.4560474459505,13.0296495891632,12.1218813283806,18.6391761218122,8.19786231632332,9.84399522023239,9.45191104271788,55.7140328952529,53.3913430584133,41.297823798746,7.04016005202667,13.7250180845588,1.7591609295801,6.77914848749878,6.64860189058859,11.8439185398949,12.6548185192851,10.5912938404329,15.4264643556515,4.29628689337247,10.7325346502102,2.34216797332867,2.5289231487682,3.06105620669094,6.17889753126432,2.78949646520444,4.74020765053944,3.27956035959051,5.95017752699736,1.72454394346274,3.02569728268511,1.75951124163949,7.89104636739269,9.45360647367033,9.4028084960985,15.8452245034116,4.17971960318836,40.7283648641676,32.9405321106835,35.5204374244491,14.0845525324141,21.1073453982987,23.948254174315,14.9149183418682,27.3502282128891,30.8534225774757,37.6704990495661,37.5582761959467,32.8110612051746,25.342216886676,37.922684202271,24.158505244665,28.5089975479398,26.5655639502171,27.3781094271158,6.72927835405207,2.6755199218614,4.62586296177317,4.49565963328025,4.05247676016945,4.64473343720877,3.35055399437443,4.63872106633688,12.8979265430025,14.2669219584419,13.2868137232463,18.1168850196412,14.0747716928151,14.9217354030863,14.622306533934,9.88701349519644,14.0489732418551,14.9355954940775,7.77638393907635,9.93962059704641,4.50830942692322,8.96065842519383,9.89157684554891,8.55657002661886,12.1414151278574,14.6134046499806,18.5258498852822,16.0416313098341,1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| ||
|EntrezGene=20196 | |||
|HGNC= | |||
|MCL_coexpression_id=1159 | |||
|UniProt=P97352 | |||
|association_with_transcript=158bp_to_ENSMUST00000107338_5end | |||
|description=CAGE_peak_1_at_S100a13_5end | |||
|id=chr3:90318840..90318898,+ | |||
|ontology_enrichment_celltype=CL:0000219!2.81e-10!54;CL:0002320!1.92e-07!46;CL:0000134!1.92e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,2.81e-10,54;CL:0002320,1.92e-07,46;CL:0000134,1.92e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!4.61e-11!88;UBERON:0002204!4.38e-10!32;UBERON:0004535!3.29e-09!23;UBERON:0001009!3.29e-09!23;UBERON:0004872!8.62e-09!33;UBERON:0002384!1.92e-07!46;UBERON:0007100!2.05e-07!18;UBERON:0000948!2.05e-07!18;UBERON:0005498!2.05e-07!18;UBERON:0004140!2.05e-07!18;UBERON:0009881!2.05e-07!18;UBERON:0004141!2.05e-07!18;UBERON:0003084!2.05e-07!18;UBERON:0007005!2.05e-07!18;UBERON:0004139!2.05e-07!18;UBERON:0004291!2.05e-07!18;UBERON:0002193!2.40e-07!48;UBERON:0002390!6.85e-07!45;UBERON:0003061!6.85e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,7.42e-11,87;UBERON:0002204,4.38e-10,32;UBERON:0004535,3.29e-09,23;UBERON:0001009,3.29e-09,23;UBERON:0004872,8.62e-09,33;UBERON:0002384,1.92e-07,46;UBERON:0007100,2.05e-07,18;UBERON:0000948,2.05e-07,18;UBERON:0005498,2.05e-07,18;UBERON:0004140,2.05e-07,18;UBERON:0009881,2.05e-07,18;UBERON:0004141,2.05e-07,18;UBERON:0003084,2.05e-07,18;UBERON:0007005,2.05e-07,18;UBERON:0004139,2.05e-07,18;UBERON:0004291,2.05e-07,18;UBERON:0002193,2.40e-07,48;UBERON:0002405,2.40e-07,48;UBERON:0002390,6.85e-07,45;UBERON:0003061,6.85e-07,45 | |||
|phase1_expression=18.2569685699465,5.93258192986914,6.3699893514535,2.41971369045464,3.50627010962443,10.5763941304491,11.2134067485852,52.0366993469552,5.77233760821834,6.08567768437183,1.19852577757853,1.43589886191606,34.924948905966,39.6888626982248,12.3250611871795,11.9460407759997,9.09430441566591,25.0792421459799,24.5434836154272,22.4926515452956,17.7740476415736,13.3049874609186,15.9331871374751,15.1992801653736,20.8762445771125,10.9104073181854,11.630573896295,9.9116767035509,17.4821545899864,16.1299283046356,10.6430645114546,3.17515336729816,6.1506478758457,0,2.88851619751275,3.65716219788683,2.04169356262369,136.859843250969,170.331105106188,133.498554713319,125.293306950606,140.024324416481,155.363312969969,26.5642285928468,25.3442328048786,22.3927037637251,57.1145681374069,56.4685155025357,46.1340983742391,58.1345398232107,40.3160894281044,38.8131923785423,28.5230430298152,47.1485392307374,43.6921938885203,68.4310099855619,71.9198934246279,71.162748734287,1.21389876515759,2.11596391708813,1.90149421051854,36.5952094634663,32.014612660001,73.341826958434,104.819834432099,93.0728950579391,68.0092250876779,66.8539851259505,2.28117147078651,2.70011876663381,2.3135745748652,21.9951257990929,26.7250934551452,3.42974237801871,2.68367318851062,3.67687514644008,26.4278114398533,16.2162919368188,16.2822925251618,1.45074916503213,2.47016637726506,3.12548022334056,28.4766658981409,31.5147061617741,19.8637722109853,9.72274332063103,10.2507610175354,2.79599168737951,10.9802980333117,32.3446277257042,64.9296454691758,45.6024654800135,6.79971333707751,13.4925797909454,19.4932925234301,22.4013443548668,22.4711072210803,54.8785638701346,88.0674555603725,65.7211608589233,13.0984380392313,42.3477375467249,15.2883143823987,21.3320010945999,18.8347205679756,21.7889484308585,16.6823066854878,14.5013527243206,19.1614033898907,13.0629082377046,8.84775166507293,11.8741536541735,9.91646638201052,10.0984169170257,7.4080885495494,14.2003248202533,21.0115722574218,30.2212655962615,15.0383793831479,12.4560474459505,13.0296495891632,12.1218813283806,18.6391761218122,8.19786231632332,9.84399522023239,9.45191104271788,55.7140328952529,53.3913430584133,41.297823798746,7.04016005202667,13.7250180845588,1.7591609295801,6.77914848749878,6.64860189058859,11.8439185398949,12.6548185192851,10.5912938404329,15.4264643556515,4.29628689337247,10.7325346502102,2.34216797332867,2.5289231487682,3.06105620669094,6.17889753126432,2.78949646520444,4.74020765053944,3.27956035959051,5.95017752699736,1.72454394346274,3.02569728268511,1.75951124163949,7.89104636739269,9.45360647367033,9.4028084960985,15.8452245034116,4.17971960318836,40.7283648641676,32.9405321106835,35.5204374244491,14.0845525324141,21.1073453982987,23.948254174315,14.9149183418682,27.3502282128891,30.8534225774757,37.6704990495661,37.5582761959467,32.8110612051746,25.342216886676,37.922684202271,24.158505244665,28.5089975479398,26.5655639502171,27.3781094271158,6.72927835405207,2.6755199218614,4.62586296177317,4.49565963328025,4.05247676016945,4.64473343720877,3.35055399437443,4.63872106633688,12.8979265430025,14.2669219584419,13.2868137232463,18.1168850196412,14.0747716928151,14.9217354030863,14.622306533934,9.88701349519644,14.0489732418551,14.9355954940775,7.77638393907635,9.93962059704641,4.50830942692322,8.96065842519383,9.89157684554891,8.55657002661886,12.1414151278574,14.6134046499806,18.5258498852822,16.0416313098341,16.008441862706,4.17112764290235,4.12773889737726,7.19558759631532,5.68008339887808,6.99413763282009,11.2035374783825,12.9463261852865,11.3494658742525,8.51140380883053,2.87536413054709,11.9085103253921,11.8574315783533,15.1547326768267,12.0196267059681,17.3679667690812,46.0035443514846,5.87423376488503,5.86673915191293,10.863685489612,19.0099101113687,13.7355131102289,24.0424077294874,19.1230974900643,19.3891227250615,21.7035395855799,17.6994793209811,43.5876417143863,44.8980952851329,44.9858572188501,88.9668575241706,82.1297582566252,22.1293922858566,17.1080782708934,14.4495530989013,17.4645413022383,5.24591825205361,13.3809591418318,5.36363973007636,9.37052986311932,12.7099804662351,8.36390792833932,11.3627323782021,7.35998980050964,13.3587531552715,23.0882127749936,16.2067988958075,10.6036034419196,10.2196861349953,14.2452482933804,6.67836533349662,8.41347627159931,7.96470830039777,10.6823479908192,9.67435382287203,8.48722858901541,11.2214719294694,11.9899707698132,8.78656196771952,5.45300594216258,9.9819265947722,8.53299246426703,11.5960469432499,7.21948802737308,8.85142974959849,3.96134406868882,4.65691261617916,8.14480733120051,4.61084607469911,4.63758925765383,8.39200005070817,4.56697423671899,15.2536610241412,27.3263371414328,3.52845436887939,11.5420377059036,8.55761461488299,9.95163261314572,8.47543642422269,4.59594519286172,13.9910801582328,16.1320012749143,17.2579589605831,17.9556575128004,19.4454253738197,11.3021074202815,10.5254555345189,15.0993594316305,30.596117398894,32.328785486765,29.5747943941467,24.821436068393,2.53068794864908,5.28630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| |||
|short_description=p1@S100a13 | |||
}} |
Revision as of 02:55, 14 September 2013
Short description: | p1@S100a13 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_S100a13_5end |
Coexpression cluster: | MCL_coexpression_mm9:1159 |
Association with transcript: | 158bp_to_ENSMUST00000107338_5end |
EntrezGene: | S100a13 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 2.81e-10 | 54 |
connective tissue cell | 1.92e-07 | 46 |
mesenchymal cell | 1.92e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 7.42e-11 | 87 |
musculoskeletal system | 4.38e-10 | 32 |
cardiovascular system | 3.29e-09 | 23 |
circulatory system | 3.29e-09 | 23 |
splanchnic layer of lateral plate mesoderm | 8.62e-09 | 33 |
connective tissue | 1.92e-07 | 46 |
primary circulatory organ | 2.05e-07 | 18 |
heart | 2.05e-07 | 18 |
primitive heart tube | 2.05e-07 | 18 |
primary heart field | 2.05e-07 | 18 |
anterior lateral plate mesoderm | 2.05e-07 | 18 |
heart tube | 2.05e-07 | 18 |
heart primordium | 2.05e-07 | 18 |
cardiac mesoderm | 2.05e-07 | 18 |
cardiogenic plate | 2.05e-07 | 18 |
heart rudiment | 2.05e-07 | 18 |
hemolymphoid system | 2.40e-07 | 48 |
immune system | 2.40e-07 | 48 |
hematopoietic system | 6.85e-07 | 45 |
blood island | 6.85e-07 | 45 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.