FFCP PHASE1:Mm9::chr11:120924615..120924633,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=58210|HGNC=|MCL_coexpression_id=74|UniProt=|association_with_transcript=0bp_to_ENSMUST00000132117_5end|description=CAGE_peak_3_at_Sectm1b_5end|id=chr11:120924615..120924633,-|ontology_enrichment_celltype=CL:0000239!1.51e-11!6;CL:0000677!1.51e-11!6;CL:0000212!1.51e-11!6;CL:0000584!1.51e-11!6;CL:0002563!7.63e-10!9;CL:0002251!7.63e-10!9;CL:0000075!8.62e-10!7|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!8.78e-24!59;UBERON:0000160!5.92e-21!43;UBERON:0000344!1.82e-20!15;UBERON:0001242!5.33e-17!13;UBERON:0000060!5.33e-17!13;UBERON:0001262!5.33e-17!13;UBERON:0004786!5.33e-17!13;UBERON:0004923!1.29e-11!24;UBERON:0003350!7.63e-10!9;UBERON:0004808!7.63e-10!9;UBERON:0001277!7.63e-10!9;UBERON:0001007!1.19e-08!128;UBERON:0001555!1.19e-08!128;UBERON:0007026!1.19e-08!128;UBERON:0004119!2.11e-08!130;UBERON:0000925!2.11e-08!130;UBERON:0006595!2.11e-08!130;UBERON:0000485!7.36e-08!11;UBERON:0004921!2.77e-07!126;UBERON:0004185!2.77e-07!126;UBERON:0000331!5.40e-07!3;UBERON:0002116!5.40e-07!3;UBERON:0001204!5.40e-07!3;UBERON:0001168!5.40e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.66e-32,47;UBERON:0000160,4.50e-30,31;UBERON:0000344,1.17e-13,15;UBERON:0001007,2.49e-13,116;UBERON:0001555,2.49e-13,116;UBERON:0007026,2.49e-13,116;UBERON:0004119,4.95e-13,118;UBERON:0000925,4.95e-13,118;UBERON:0006595,4.95e-13,118;UBERON:0004921,5.03e-11,114;UBERON:0001242,2.72e-09,13;UBERON:0001262,2.72e-09,13;UBERON:0004786,2.72e-09,13;UBERON:0002108,1.13e-08,4;UBERON:0004923,4.22e-08,24;UBERON:0001962,2.08e-07,2;UBERON:0001961,2.08e-07,2;UBERON:0001744,2.08e-07,2|phase1_expression=0,1.04692622291808,0.909998478779072,3.93203474698879,4.50806156951712,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,1.59992422793407,1.14704640533585,0,0.430761996159075,0,8.17100703662408,1.51218077855958,0.443461021310609,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,2.74041311325744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.64188343542338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.4247589876552,4.23120906661671,0,0,0,0,0,0.380451252225118,4.2707615539006,1.4822905925161,2.5133520880027,4.77495532898762,3.11942539390592,4.49409704327111,9.07779809473716,6.37252074413975,0,0,0,0,0,0,0.0632365371242573,0.590440591918409,0,1.1105744752962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0.0603129249281559,0,0,4.95517422270746,0,0,0,0,0,0,0,0,0,0,3.81868247206045,0,0,0,0,0.218362563746178,1.21377911746339,1.57041565878138,1.30877970992015,6.86959358446502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549454872801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p3@Sectm1b}} | ||
|EntrezGene=58210 | |||
|HGNC= | |||
|MCL_coexpression_id=74 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000132117_5end | |||
|description=CAGE_peak_3_at_Sectm1b_5end | |||
|id=chr11:120924615..120924633,- | |||
|ontology_enrichment_celltype=CL:0000239!1.51e-11!6;CL:0000677!1.51e-11!6;CL:0000212!1.51e-11!6;CL:0000584!1.51e-11!6;CL:0002563!7.63e-10!9;CL:0002251!7.63e-10!9;CL:0000075!8.62e-10!7 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!8.78e-24!59;UBERON:0000160!5.92e-21!43;UBERON:0000344!1.82e-20!15;UBERON:0001242!5.33e-17!13;UBERON:0000060!5.33e-17!13;UBERON:0001262!5.33e-17!13;UBERON:0004786!5.33e-17!13;UBERON:0004923!1.29e-11!24;UBERON:0003350!7.63e-10!9;UBERON:0004808!7.63e-10!9;UBERON:0001277!7.63e-10!9;UBERON:0001007!1.19e-08!128;UBERON:0001555!1.19e-08!128;UBERON:0007026!1.19e-08!128;UBERON:0004119!2.11e-08!130;UBERON:0000925!2.11e-08!130;UBERON:0006595!2.11e-08!130;UBERON:0000485!7.36e-08!11;UBERON:0004921!2.77e-07!126;UBERON:0004185!2.77e-07!126;UBERON:0000331!5.40e-07!3;UBERON:0002116!5.40e-07!3;UBERON:0001204!5.40e-07!3;UBERON:0001168!5.40e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.66e-32,47;UBERON:0000160,4.50e-30,31;UBERON:0000344,1.17e-13,15;UBERON:0001007,2.49e-13,116;UBERON:0001555,2.49e-13,116;UBERON:0007026,2.49e-13,116;UBERON:0004119,4.95e-13,118;UBERON:0000925,4.95e-13,118;UBERON:0006595,4.95e-13,118;UBERON:0004921,5.03e-11,114;UBERON:0001242,2.72e-09,13;UBERON:0001262,2.72e-09,13;UBERON:0004786,2.72e-09,13;UBERON:0002108,1.13e-08,4;UBERON:0004923,4.22e-08,24;UBERON:0001962,2.08e-07,2;UBERON:0001961,2.08e-07,2;UBERON:0001744,2.08e-07,2 | |||
|phase1_expression=0,1.04692622291808,0.909998478779072,3.93203474698879,4.50806156951712,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,1.59992422793407,1.14704640533585,0,0.430761996159075,0,8.17100703662408,1.51218077855958,0.443461021310609,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,2.74041311325744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.64188343542338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.4247589876552,4.23120906661671,0,0,0,0,0,0.380451252225118,4.2707615539006,1.4822905925161,2.5133520880027,4.77495532898762,3.11942539390592,4.49409704327111,9.07779809473716,6.37252074413975,0,0,0,0,0,0,0.0632365371242573,0.590440591918409,0,1.1105744752962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32977250588296,0,0.0603129249281559,0,0,4.95517422270746,0,0,0,0,0,0,0,0,0,0,3.81868247206045,0,0,0,0,0.218362563746178,1.21377911746339,1.57041565878138,1.30877970992015,6.86959358446502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549454872801795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@Sectm1b | |||
}} |
Revision as of 19:09, 12 September 2013
Short description: | p3@Sectm1b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Sectm1b_5end |
Coexpression cluster: | MCL_coexpression_mm9:74 |
Association with transcript: | 0bp_to_ENSMUST00000132117_5end |
EntrezGene: | Sectm1b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.66e-32 | 47 |
intestine | 4.50e-30 | 31 |
mucosa | 1.17e-13 | 15 |
digestive system | 2.49e-13 | 116 |
digestive tract | 2.49e-13 | 116 |
primitive gut | 2.49e-13 | 116 |
endoderm-derived structure | 4.95e-13 | 118 |
endoderm | 4.95e-13 | 118 |
presumptive endoderm | 4.95e-13 | 118 |
subdivision of digestive tract | 5.03e-11 | 114 |
intestinal mucosa | 2.72e-09 | 13 |
wall of intestine | 2.72e-09 | 13 |
gastrointestinal system mucosa | 2.72e-09 | 13 |
small intestine | 1.13e-08 | 4 |
organ component layer | 4.22e-08 | 24 |
gut-associated lymphoid tissue | 2.08e-07 | 2 |
mucosa-associated lymphoid tissue | 2.08e-07 | 2 |
lymphoid tissue | 2.08e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.