Personal tools

FFCP PHASE1:Mm9::chr18:60542368..60542401,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=8|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:60542368..60542401,+|id=chr18:60542368..60542401,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,2.18e-17,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0009569!1.06e-13!66;UBERON:0005172!1.71e-13!49;UBERON:0005173!1.71e-13!49;UBERON:0002417!1.71e-13!49;UBERON:0000916!1.71e-13!49;UBERON:0002365!1.08e-11!25;UBERON:0002330!1.08e-11!25;UBERON:0002107!4.98e-11!22;UBERON:0007499!4.98e-11!22;UBERON:0006925!4.98e-11!22;UBERON:0009497!4.98e-11!22;UBERON:0000015!4.98e-11!22;UBERON:0002423!4.98e-11!22;UBERON:0006235!4.98e-11!22;UBERON:0008835!4.98e-11!22;UBERON:0003894!4.98e-11!22;UBERON:0004161!4.98e-11!22;UBERON:0008836!4.98e-11!22;UBERON:0005177!2.49e-10!85;UBERON:0009854!3.41e-10!23;UBERON:0009856!3.41e-10!23;UBERON:0002100!1.81e-08!98;UBERON:0005057!9.07e-08!51;UBERON:0000466!1.05e-07!79;UBERON:0003104!1.70e-07!131;UBERON:0009142!1.70e-07!131;UBERON:0003914!2.09e-07!47;UBERON:0000926!2.62e-07!193;UBERON:0004120!2.62e-07!193;UBERON:0006603!2.62e-07!193;UBERON:0001041!3.54e-07!92;UBERON:0005256!4.06e-07!47;UBERON:0000077!6.90e-07!97|ontology_enrichment_uberon_v019_2=UBERON:0002365,1.18e-40,25;UBERON:0002330,1.18e-40,25;UBERON:0002107,1.03e-36,22;UBERON:0007499,1.03e-36,22;UBERON:0006925,1.03e-36,22;UBERON:0009497,1.03e-36,22;UBERON:0000015,1.03e-36,22;UBERON:0002423,1.03e-36,22;UBERON:0006235,1.03e-36,22;UBERON:0008835,1.03e-36,22;UBERON:0003894,1.03e-36,22;UBERON:0004161,1.03e-36,22;UBERON:0008836,1.03e-36,22;UBERON:0009854,5.65e-35,23;UBERON:0009856,5.65e-35,23;UBERON:0005256,1.20e-20,45;UBERON:0003914,1.01e-19,47;UBERON:0005172,1.47e-16,49;UBERON:0005173,1.47e-16,49;UBERON:0002417,1.47e-16,49;UBERON:0000916,1.47e-16,49;UBERON:0002530,5.85e-15,65;UBERON:0009569,1.58e-14,66;UBERON:0003104,2.96e-14,61;UBERON:0009142,2.96e-14,61;UBERON:0005177,6.91e-13,79;UBERON:0002368,7.13e-13,60;UBERON:0003929,1.11e-12,55;UBERON:0005911,3.16e-12,69;UBERON:0002100,4.07e-12,90;UBERON:0000949,1.74e-11,72;UBERON:0000490,2.02e-11,66;UBERON:0001041,2.61e-11,80;UBERON:0000025,9.66e-08,114;UBERON:0001911,1.82e-07,2;UBERON:0000076,1.82e-07,2;UBERON:0005333,1.82e-07,2;UBERON:0008425,1.82e-07,2;UBERON:0005311,1.82e-07,2;UBERON:0004111,5.75e-07,122;UBERON:0001048,7.29e-07,134;UBERON:0004921,8.90e-07,114|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.513602189793617,0,0.333109761815663,0,0,0,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54701627683233,0,0,0,0,0.889294796111139,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,21.4499721639242,19.7897491705719,4.75979933595425,17.810205324048,24.0417274455638,29.5697745484241,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0,1.55362730188303,0.29688427812965,0,0,0,1.05505848386836,0.823120949949934,0.753999547978053,0.988779870937496,1.87979163995885,0,0.161766849947409,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0.712875546952214,0.124406970610093,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0.234526059981096,0,0,0.196764231747404,0,0,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0.146199987425332,0.878200461164203,0.536825675041487,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0.164698954724011,0.502670417600539,0.198956472041151,0,0,0,0.199141273254367,0,0,0,0.203651327845314,0.387904974335251,0.140271639780637,0.252946148497029,0.147610147979602,0.627994911365499,0.616985819609003,24.3091154211462,0,0.196558995113203,0,0,0,0.50925170356284,3.74004978686054,2.91843408195064,6.86403532970204,12.9391385874619,13.3970741160661,13.4176199439261,19.9537313578218,24.9362404795458,8.68398338454061,1.66277871149944,0,0.162964976442026,0,0,0,0,0.780534591431195,0.630540576424764,0.664394068946325,0.159454768657487,0.983179888294428,0.690739927463582,1.44649058581512,0,0,7.37646409528554,6.34654516500885,0.160550589987792,0.117211686592203,0,0.252470927204373,0.315508219416257,0,0,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0.35613120733451,0.488660878060728,0.329940245945071,0,0,0,0,0,0.614870295887855,1.29214146584111,0,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0.21183207086382,0,0,0.161464426695906,0.120625849856312,0,0,0.291480836629851,0.370850604021019,0.170870880797853,0.206386867963223,0.370389054739423,0.376736914009382,0.136694227721025,0.457556346413045,0.169978429993855,0.279902904647316,0.138199973804424,0,0,0,0,0,0.436725127492355,0.134864346384821,1.07449492442937,0.26175594198403,0.259229946583586,0,0,0,0,0,0.129159823477731,0,0.234714477291508,0.13020438484395,0,0,0,0.316011120628178,0,0.205421914329655,0.25984164595559,0,0,0.240390899039938,0.295379054349154,0.504832249740738,0,0.100826185136841,0.194915761479505,0,0,0,0,0,0,0,1.31377732815827,1.64836461840539,0.214368379079066,0.501572104035363,0,0,0,0,0,0.755393897389701,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0.64183841918363,0.505394423527595,0.25347929989024,0.188626341386076,0.0936415074698824,0.320125762024346,0.34461281373368,0,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,0,0.238436189947321,0.145346416632329,0.376437521661322,0.169229215783353,0.73171189149109,0.263069711437843,0.271608227691724,0,0.355905054372522,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0.935726433781634,0.859484216193193,0.382576664137687,0.441182838239031,0.231867835620421|short_description=p@chr18:60542368..60542401,+}}
|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=8
|UniProt=NA
|association_with_transcript=NA
|description=CAGE_peak_at_chr18:60542368..60542401,+
|id=chr18:60542368..60542401,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000182,2.18e-17,5
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0009569!1.06e-13!66;UBERON:0005172!1.71e-13!49;UBERON:0005173!1.71e-13!49;UBERON:0002417!1.71e-13!49;UBERON:0000916!1.71e-13!49;UBERON:0002365!1.08e-11!25;UBERON:0002330!1.08e-11!25;UBERON:0002107!4.98e-11!22;UBERON:0007499!4.98e-11!22;UBERON:0006925!4.98e-11!22;UBERON:0009497!4.98e-11!22;UBERON:0000015!4.98e-11!22;UBERON:0002423!4.98e-11!22;UBERON:0006235!4.98e-11!22;UBERON:0008835!4.98e-11!22;UBERON:0003894!4.98e-11!22;UBERON:0004161!4.98e-11!22;UBERON:0008836!4.98e-11!22;UBERON:0005177!2.49e-10!85;UBERON:0009854!3.41e-10!23;UBERON:0009856!3.41e-10!23;UBERON:0002100!1.81e-08!98;UBERON:0005057!9.07e-08!51;UBERON:0000466!1.05e-07!79;UBERON:0003104!1.70e-07!131;UBERON:0009142!1.70e-07!131;UBERON:0003914!2.09e-07!47;UBERON:0000926!2.62e-07!193;UBERON:0004120!2.62e-07!193;UBERON:0006603!2.62e-07!193;UBERON:0001041!3.54e-07!92;UBERON:0005256!4.06e-07!47;UBERON:0000077!6.90e-07!97
|ontology_enrichment_uberon_v019_2=UBERON:0002365,1.18e-40,25;UBERON:0002330,1.18e-40,25;UBERON:0002107,1.03e-36,22;UBERON:0007499,1.03e-36,22;UBERON:0006925,1.03e-36,22;UBERON:0009497,1.03e-36,22;UBERON:0000015,1.03e-36,22;UBERON:0002423,1.03e-36,22;UBERON:0006235,1.03e-36,22;UBERON:0008835,1.03e-36,22;UBERON:0003894,1.03e-36,22;UBERON:0004161,1.03e-36,22;UBERON:0008836,1.03e-36,22;UBERON:0009854,5.65e-35,23;UBERON:0009856,5.65e-35,23;UBERON:0005256,1.20e-20,45;UBERON:0003914,1.01e-19,47;UBERON:0005172,1.47e-16,49;UBERON:0005173,1.47e-16,49;UBERON:0002417,1.47e-16,49;UBERON:0000916,1.47e-16,49;UBERON:0002530,5.85e-15,65;UBERON:0009569,1.58e-14,66;UBERON:0003104,2.96e-14,61;UBERON:0009142,2.96e-14,61;UBERON:0005177,6.91e-13,79;UBERON:0002368,7.13e-13,60;UBERON:0003929,1.11e-12,55;UBERON:0005911,3.16e-12,69;UBERON:0002100,4.07e-12,90;UBERON:0000949,1.74e-11,72;UBERON:0000490,2.02e-11,66;UBERON:0001041,2.61e-11,80;UBERON:0000025,9.66e-08,114;UBERON:0001911,1.82e-07,2;UBERON:0000076,1.82e-07,2;UBERON:0005333,1.82e-07,2;UBERON:0008425,1.82e-07,2;UBERON:0005311,1.82e-07,2;UBERON:0004111,5.75e-07,122;UBERON:0001048,7.29e-07,134;UBERON:0004921,8.90e-07,114
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.513602189793617,0,0.333109761815663,0,0,0,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54701627683233,0,0,0,0,0.889294796111139,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,21.4499721639242,19.7897491705719,4.75979933595425,17.810205324048,24.0417274455638,29.5697745484241,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0,1.55362730188303,0.29688427812965,0,0,0,1.05505848386836,0.823120949949934,0.753999547978053,0.988779870937496,1.87979163995885,0,0.161766849947409,0,0,0,0,0.209446706813455,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0.712875546952214,0.124406970610093,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0.234526059981096,0,0,0.196764231747404,0,0,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0.146199987425332,0.878200461164203,0.536825675041487,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0.164698954724011,0.502670417600539,0.198956472041151,0,0,0,0.199141273254367,0,0,0,0.203651327845314,0.387904974335251,0.140271639780637,0.252946148497029,0.147610147979602,0.627994911365499,0.616985819609003,24.3091154211462,0,0.196558995113203,0,0,0,0.50925170356284,3.74004978686054,2.91843408195064,6.86403532970204,12.9391385874619,13.3970741160661,13.4176199439261,19.9537313578218,24.9362404795458,8.68398338454061,1.66277871149944,0,0.162964976442026,0,0,0,0,0.780534591431195,0.630540576424764,0.664394068946325,0.159454768657487,0.983179888294428,0.690739927463582,1.44649058581512,0,0,7.37646409528554,6.34654516500885,0.160550589987792,0.117211686592203,0,0.252470927204373,0.315508219416257,0,0,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0.35613120733451,0.488660878060728,0.329940245945071,0,0,0,0,0,0.614870295887855,1.29214146584111,0,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0.21183207086382,0,0,0.161464426695906,0.120625849856312,0,0,0.291480836629851,0.370850604021019,0.170870880797853,0.206386867963223,0.370389054739423,0.376736914009382,0.136694227721025,0.457556346413045,0.169978429993855,0.279902904647316,0.138199973804424,0,0,0,0,0,0.436725127492355,0.134864346384821,1.07449492442937,0.26175594198403,0.259229946583586,0,0,0,0,0,0.129159823477731,0,0.234714477291508,0.13020438484395,0,0,0,0.316011120628178,0,0.205421914329655,0.25984164595559,0,0,0.240390899039938,0.295379054349154,0.504832249740738,0,0.100826185136841,0.194915761479505,0,0,0,0,0,0,0,1.31377732815827,1.64836461840539,0.214368379079066,0.501572104035363,0,0,0,0,0,0.755393897389701,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0.64183841918363,0.505394423527595,0.25347929989024,0.188626341386076,0.0936415074698824,0.320125762024346,0.34461281373368,0,0.115884325944855,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,0,0.238436189947321,0.145346416632329,0.376437521661322,0.169229215783353,0.73171189149109,0.263069711437843,0.271608227691724,0,0.355905054372522,0.197008964751127,0,0.154936841185966,0.192906610981141,0,0.935726433781634,0.859484216193193,0.382576664137687,0.441182838239031,0.231867835620421
|short_description=p@chr18:60542368..60542401,+
}}

Revision as of 16:25, 13 September 2013

Short description:p@chr18:60542368..60542401, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr18:60542368..60542401, +
Coexpression cluster:MCL_coexpression_mm9:8
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr18:60542368..60542401+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G321.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F719.79
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C817.81
Mouse hepatocyte, donor6.CNhs13090.11822-124F424.04
Mouse hepatocyte, donor8.CNhs13091.11824-124F629.57
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H91.55
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F51.06
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H11.88
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.21
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.71
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B224.31
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G43.74
liver, neonate N00.CNhs11117.641-24F42.92
liver, neonate N03.CNhs11123.1345-25G26.86
liver, neonate N06.CNhs11101.684-20A812.94
liver, neonate N07.CNhs11103.716-20H213.40
liver, neonate N10.CNhs11115.751-24B913.42
liver, neonate N20.CNhs11220.823-25A319.95
liver, neonate N25.CNhs11198.1368-26H124.94
liver, neonate N30.CNhs11106.1382-42D18.68
lung, adult.CNhs10474.28-22B11.66
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.78
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C70.69
lung, neonate N30.CNhs11133.1394-42H21.45
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B67.38
mammary gland, adult pregnant day19.CNhs10476.588-5H26.35
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.29
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A91.07
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
hepatocyte2.18e-175

Uber anatomy
Ontology termp-valuen
exocrine gland1.18e-4025
exocrine system1.18e-4025
liver1.03e-3622
epithelial sac1.03e-3622
digestive gland1.03e-3622
epithelium of foregut-midgut junction1.03e-3622
anatomical boundary1.03e-3622
hepatobiliary system1.03e-3622
foregut-midgut junction1.03e-3622
hepatic diverticulum1.03e-3622
liver primordium1.03e-3622
septum transversum1.03e-3622
liver bud1.03e-3622
digestive tract diverticulum5.65e-3523
sac5.65e-3523
trunk mesenchyme1.20e-2045
epithelial tube1.01e-1947
abdomen element1.47e-1649
abdominal segment element1.47e-1649
abdominal segment of trunk1.47e-1649
abdomen1.47e-1649
gland5.85e-1565
subdivision of trunk1.58e-1466
mesenchyme2.96e-1461
entire embryonic mesenchyme2.96e-1461
trunk region element6.91e-1379
endocrine gland7.13e-1360
gut epithelium1.11e-1255
endo-epithelium3.16e-1269
trunk4.07e-1290
endocrine system1.74e-1172
unilaminar epithelium2.02e-1166
foregut2.61e-1180
tube9.66e-08114
mammary gland1.82e-072
external ectoderm1.82e-072
mammary bud1.82e-072
mammary ridge1.82e-072
mammary placode1.82e-072
anatomical conduit5.75e-07122
primordium7.29e-07134
subdivision of digestive tract8.90e-07114







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr18:60542368..60542401,%2B&oldid=2952684"