FFCP PHASE1:Mm9::chr2:129114638..129114639,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1434|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:129114638..129114639,-|id=chr2:129114638..129114639,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001048!2.92e-10!147;UBERON:0000926!4.20e-09!193;UBERON:0004120!4.20e-09!193;UBERON:0006603!4.20e-09!193|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.56e-17,6;UBERON:0004457,1.56e-17,6;UBERON:0000042,1.56e-17,6;UBERON:0004854,1.56e-17,6;UBERON:0009034,1.56e-17,6;UBERON:0002095,1.56e-17,6;UBERON:0004782,1.56e-17,6;UBERON:0003281,1.56e-17,6;UBERON:0009664,1.56e-17,6;UBERON:0002296,1.56e-17,6;UBERON:0005602,1.56e-17,6;UBERON:0001179,1.56e-17,6;UBERON:0006293,1.56e-17,6;UBERON:0004177,1.95e-13,29;UBERON:0005057,1.95e-13,29;UBERON:0001041,4.45e-12,80;UBERON:0000077,5.29e-11,35;UBERON:0003887,1.25e-10,10;UBERON:0002390,2.22e-08,45;UBERON:0003061,2.22e-08,45;UBERON:0004921,4.96e-08,114;UBERON:0001007,7.26e-08,116;UBERON:0001555,7.26e-08,116;UBERON:0007026,7.26e-08,116;UBERON:0001048,7.70e-08,134;UBERON:0002193,8.36e-08,48;UBERON:0002405,8.36e-08,48;UBERON:0004119,1.05e-07,118;UBERON:0000925,1.05e-07,118;UBERON:0006595,1.05e-07,118;UBERON:0005172,1.50e-07,49;UBERON:0005173,1.50e-07,49;UBERON:0002417,1.50e-07,49;UBERON:0000916,1.50e-07,49;UBERON:0009569,7.75e-07,66|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,0,0,0.137114433605739,0,0,0.0992909512008853,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0.693941307064543,0,0.230615497256059,0.452167921657868,0.352766121407114,0,0,0,0,0.323533699894818,0,0.969750506270444,0,0,0,0.255457055208591,0.359445373517761,0,0.127070227073065,0,0,0.125654352112864,0,0,0,0,0.203678727700633,0.746441823660558,0,0,0.260240885925407,0,0.180062129805349,0.30140963567143,0.340182495756639,0.12811372028485,0.468508622798644,0,0,0,0.351902248327898,0.219195732427575,0.556094498451196,0.348252166522167,0.411564272815887,0.398068533636986,0.702213187313235,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.473489471170421,0.590292695242212,0.771335564436891,0.697601834251224,1.07309360559848,0.817357396570186,0.493679549740441,0.656669856316381,0.162137619091711,0,0,0,0,0.102904612379284,0,0,0.426576501070468,0.464473343720877,0.515469845288373,0,0.22237804384487,0.570676878337677,0,0,0,0.198956472041151,0,0,0,0,0,0.456994050438915,0,0.407302655690628,0.969762435838129,0.561086559122548,0.189709611372772,0,0,0.123397163921801,0,1.00107063429656,0.196558995113203,1.12431056192427,0.202860121388503,0.72353147925725,0.25462585178142,0,0.648540907100142,1.37280706594041,1.43768206527355,0.372140947668503,0,0,0,0,0,0.189491411770485,0.488894929326078,0.509235257325564,1.17345124144251,0.335012514883631,0,0.195133647857799,0.157635144106191,0.221464689648775,0,0.163863314715738,0,0.289298117163023,0,0,0.491764273019036,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0.516856586336442,0.363533729477506,0,0,0,0,0,0.36012218806262,0.129358683782755,0,0,0,0.493647061806363,0,0.23467170806371,0.21183207086382,0,0.16488625294148,0.484393280087717,0.542816324353403,0.119372344003136,0,0,0,0.854354403989263,0,1.11116716421827,3.76736914009382,2.7338845544205,1.37266903923914,0.169978429993855,0.139951452323658,0.138199973804424,0,0.474503990371703,0.203319467126849,0.108005340821801,0.209088296014469,0,0.539457385539283,0.330613822901344,0,0.388844919875379,0,0,0.448549638131936,0.66183396182839,0.388902376688095,0.387479470433193,0.506868376472335,0.234714477291508,0.39061315453185,0.419437377702843,0.241584120826006,0.288030006257865,0.316011120628178,0,0.308132871494482,0.51968329191118,0.716106782669926,0.198681354781265,1.32214994471966,1.62458479892035,0.908698049533329,0.838274873204998,1.10908803650525,0.877120926657772,0.769694733122636,1.5193997283604,0,0,0,0,0,0.375364950902364,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0,0.729320151204882,0.209613162627982,0,0.222246727801615,0,0,0.505394423527595,0.50695859978048,0,0.187283014939765,0.0640251524048693,0.229741875822453,0,0.347652977834566,0.578727661391115,0,0.735994600671987,0,0.354951612318675,0.476872379894642,0.145346416632329,0.282328141245992,0.169229215783353,0.365855945745545,0.263069711437843,0.135804113845862,0,0.355905054372522,0.394017929502254,0.409231043169689,0,0,0.249810577937946,0.467863216890817,0,0,0,0|short_description=p@chr2:129114638..129114639,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1434 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:129114638..129114639,- | |||
|id=chr2:129114638..129114639,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001048!2.92e-10!147;UBERON:0000926!4.20e-09!193;UBERON:0004120!4.20e-09!193;UBERON:0006603!4.20e-09!193 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.56e-17,6;UBERON:0004457,1.56e-17,6;UBERON:0000042,1.56e-17,6;UBERON:0004854,1.56e-17,6;UBERON:0009034,1.56e-17,6;UBERON:0002095,1.56e-17,6;UBERON:0004782,1.56e-17,6;UBERON:0003281,1.56e-17,6;UBERON:0009664,1.56e-17,6;UBERON:0002296,1.56e-17,6;UBERON:0005602,1.56e-17,6;UBERON:0001179,1.56e-17,6;UBERON:0006293,1.56e-17,6;UBERON:0004177,1.95e-13,29;UBERON:0005057,1.95e-13,29;UBERON:0001041,4.45e-12,80;UBERON:0000077,5.29e-11,35;UBERON:0003887,1.25e-10,10;UBERON:0002390,2.22e-08,45;UBERON:0003061,2.22e-08,45;UBERON:0004921,4.96e-08,114;UBERON:0001007,7.26e-08,116;UBERON:0001555,7.26e-08,116;UBERON:0007026,7.26e-08,116;UBERON:0001048,7.70e-08,134;UBERON:0002193,8.36e-08,48;UBERON:0002405,8.36e-08,48;UBERON:0004119,1.05e-07,118;UBERON:0000925,1.05e-07,118;UBERON:0006595,1.05e-07,118;UBERON:0005172,1.50e-07,49;UBERON:0005173,1.50e-07,49;UBERON:0002417,1.50e-07,49;UBERON:0000916,1.50e-07,49;UBERON:0009569,7.75e-07,66 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,0,0,0.137114433605739,0,0,0.0992909512008853,0.522399578277871,0,0,0,0,0,0,0,0,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0.693941307064543,0,0.230615497256059,0.452167921657868,0.352766121407114,0,0,0,0,0.323533699894818,0,0.969750506270444,0,0,0,0.255457055208591,0.359445373517761,0,0.127070227073065,0,0,0.125654352112864,0,0,0,0,0.203678727700633,0.746441823660558,0,0,0.260240885925407,0,0.180062129805349,0.30140963567143,0.340182495756639,0.12811372028485,0.468508622798644,0,0,0,0.351902248327898,0.219195732427575,0.556094498451196,0.348252166522167,0.411564272815887,0.398068533636986,0.702213187313235,0,0,0.207125772535502,0.234526059981096,0.180062061461015,0.473489471170421,0.590292695242212,0.771335564436891,0.697601834251224,1.07309360559848,0.817357396570186,0.493679549740441,0.656669856316381,0.162137619091711,0,0,0,0,0.102904612379284,0,0,0.426576501070468,0.464473343720877,0.515469845288373,0,0.22237804384487,0.570676878337677,0,0,0,0.198956472041151,0,0,0,0,0,0.456994050438915,0,0.407302655690628,0.969762435838129,0.561086559122548,0.189709611372772,0,0,0.123397163921801,0,1.00107063429656,0.196558995113203,1.12431056192427,0.202860121388503,0.72353147925725,0.25462585178142,0,0.648540907100142,1.37280706594041,1.43768206527355,0.372140947668503,0,0,0,0,0,0.189491411770485,0.488894929326078,0.509235257325564,1.17345124144251,0.335012514883631,0,0.195133647857799,0.157635144106191,0.221464689648775,0,0.163863314715738,0,0.289298117163023,0,0,0.491764273019036,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0.162886959353576,0,0,0.242780636154981,0,0,0,0,0.516856586336442,0.363533729477506,0,0,0,0,0,0.36012218806262,0.129358683782755,0,0,0,0.493647061806363,0,0.23467170806371,0.21183207086382,0,0.16488625294148,0.484393280087717,0.542816324353403,0.119372344003136,0,0,0,0.854354403989263,0,1.11116716421827,3.76736914009382,2.7338845544205,1.37266903923914,0.169978429993855,0.139951452323658,0.138199973804424,0,0.474503990371703,0.203319467126849,0.108005340821801,0.209088296014469,0,0.539457385539283,0.330613822901344,0,0.388844919875379,0,0,0.448549638131936,0.66183396182839,0.388902376688095,0.387479470433193,0.506868376472335,0.234714477291508,0.39061315453185,0.419437377702843,0.241584120826006,0.288030006257865,0.316011120628178,0,0.308132871494482,0.51968329191118,0.716106782669926,0.198681354781265,1.32214994471966,1.62458479892035,0.908698049533329,0.838274873204998,1.10908803650525,0.877120926657772,0.769694733122636,1.5193997283604,0,0,0,0,0,0.375364950902364,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0,0.729320151204882,0.209613162627982,0,0.222246727801615,0,0,0.505394423527595,0.50695859978048,0,0.187283014939765,0.0640251524048693,0.229741875822453,0,0.347652977834566,0.578727661391115,0,0.735994600671987,0,0.354951612318675,0.476872379894642,0.145346416632329,0.282328141245992,0.169229215783353,0.365855945745545,0.263069711437843,0.135804113845862,0,0.355905054372522,0.394017929502254,0.409231043169689,0,0,0.249810577937946,0.467863216890817,0,0,0,0 | |||
|short_description=p@chr2:129114638..129114639,- | |||
}} |
Revision as of 22:02, 13 September 2013
Short description: | p@chr2:129114638..129114639, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:129114638..129114639, - |
Coexpression cluster: | MCL_coexpression_mm9:1434 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
spleen | 1.56e-17 | 6 |
cavity lining | 1.56e-17 | 6 |
serous membrane | 1.56e-17 | 6 |
gastrointestinal system mesentery | 1.56e-17 | 6 |
stomach region | 1.56e-17 | 6 |
mesentery | 1.56e-17 | 6 |
gastrointestinal system serosa | 1.56e-17 | 6 |
mesentery of stomach | 1.56e-17 | 6 |
gut mesentery | 1.56e-17 | 6 |
dorsal mesentery | 1.56e-17 | 6 |
dorsal mesogastrium | 1.56e-17 | 6 |
peritoneal cavity | 1.56e-17 | 6 |
spleen primordium | 1.56e-17 | 6 |
hemopoietic organ | 1.95e-13 | 29 |
immune organ | 1.95e-13 | 29 |
foregut | 4.45e-12 | 80 |
mixed endoderm/mesoderm-derived structure | 5.29e-11 | 35 |
intraembryonic coelom | 1.25e-10 | 10 |
hematopoietic system | 2.22e-08 | 45 |
blood island | 2.22e-08 | 45 |
subdivision of digestive tract | 4.96e-08 | 114 |
digestive system | 7.26e-08 | 116 |
digestive tract | 7.26e-08 | 116 |
primitive gut | 7.26e-08 | 116 |
primordium | 7.70e-08 | 134 |
hemolymphoid system | 8.36e-08 | 48 |
immune system | 8.36e-08 | 48 |
endoderm-derived structure | 1.05e-07 | 118 |
endoderm | 1.05e-07 | 118 |
presumptive endoderm | 1.05e-07 | 118 |
abdomen element | 1.50e-07 | 49 |
abdominal segment element | 1.50e-07 | 49 |
abdominal segment of trunk | 1.50e-07 | 49 |
abdomen | 1.50e-07 | 49 |
subdivision of trunk | 7.75e-07 | 66 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.