FFCP PHASE1:Mm9::chr16:19232696..19232701,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1030|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:19232696..19232701,+|id=chr16:19232696..19232701,+|ontology_enrichment_celltype=CL:0000553!7.61e-11!6;CL:0000556!7.61e-11!6;CL:0000050!4.51e-07!9|ontology_enrichment_celltype_v019_2=CL:0000553,1.20e-12,6;CL:0000556,1.20e-12,6;CL:0000945,3.04e-09,1;CL:0000236,3.04e-09,1;CL:0000826,3.04e-09,1;CL:0000050,1.25e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002106!1.20e-10!6;UBERON:0004457!1.20e-10!6;UBERON:0000042!1.20e-10!6;UBERON:0004854!1.20e-10!6;UBERON:0009034!1.20e-10!6;UBERON:0002095!1.20e-10!6;UBERON:0004782!1.20e-10!6;UBERON:0003281!1.20e-10!6;UBERON:0009664!1.20e-10!6;UBERON:0002296!1.20e-10!6;UBERON:0005602!1.20e-10!6;UBERON:0001179!1.20e-10!6;UBERON:0006293!1.20e-10!6;UBERON:0002193!1.59e-10!48;UBERON:0002405!2.81e-10!70;UBERON:0002390!1.21e-08!45;UBERON:0003061!1.21e-08!45;UBERON:0002048!2.16e-07!14;UBERON:0000117!2.16e-07!14;UBERON:0000171!2.16e-07!14;UBERON:0000170!2.16e-07!14;UBERON:0005597!2.16e-07!14;UBERON:0000118!2.16e-07!14;UBERON:0009569!8.93e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0002106,8.22e-22,6;UBERON:0004457,8.22e-22,6;UBERON:0000042,8.22e-22,6;UBERON:0004854,8.22e-22,6;UBERON:0009034,8.22e-22,6;UBERON:0002095,8.22e-22,6;UBERON:0004782,8.22e-22,6;UBERON:0003281,8.22e-22,6;UBERON:0009664,8.22e-22,6;UBERON:0002296,8.22e-22,6;UBERON:0005602,8.22e-22,6;UBERON:0001179,8.22e-22,6;UBERON:0006293,8.22e-22,6;UBERON:0003887,3.04e-13,10;UBERON:0002390,2.11e-08,45;UBERON:0003061,2.11e-08,45;UBERON:0000945,2.18e-08,16;UBERON:0010039,2.18e-08,16;UBERON:0002193,7.52e-08,48;UBERON:0002405,7.52e-08,48;UBERON:0002075,4.22e-07,19|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999329285446988,1.01237633694913,0,4.10100814965709,4.38766187538364,0.84877930359606,0,0,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68452169692378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0.517875767294343,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0.441683036920787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324270453550071,0.823684239564244,2.87536413054709,0,0,0.252578877947112,0,0,0.184753190166605,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0.797273843287435,1.47476983244164,2.93564469172023,0.723245292907558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,1.36696704638282,0,0.185194527369712,1.88368457004691,7.79157098009843,5.71945433016307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0.201652370273681,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p@chr16:19232696..19232701,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1030 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:19232696..19232701,+ | |||
|id=chr16:19232696..19232701,+ | |||
|ontology_enrichment_celltype=CL:0000553!7.61e-11!6;CL:0000556!7.61e-11!6;CL:0000050!4.51e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.20e-12,6;CL:0000556,1.20e-12,6;CL:0000945,3.04e-09,1;CL:0000236,3.04e-09,1;CL:0000826,3.04e-09,1;CL:0000050,1.25e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!1.20e-10!6;UBERON:0004457!1.20e-10!6;UBERON:0000042!1.20e-10!6;UBERON:0004854!1.20e-10!6;UBERON:0009034!1.20e-10!6;UBERON:0002095!1.20e-10!6;UBERON:0004782!1.20e-10!6;UBERON:0003281!1.20e-10!6;UBERON:0009664!1.20e-10!6;UBERON:0002296!1.20e-10!6;UBERON:0005602!1.20e-10!6;UBERON:0001179!1.20e-10!6;UBERON:0006293!1.20e-10!6;UBERON:0002193!1.59e-10!48;UBERON:0002405!2.81e-10!70;UBERON:0002390!1.21e-08!45;UBERON:0003061!1.21e-08!45;UBERON:0002048!2.16e-07!14;UBERON:0000117!2.16e-07!14;UBERON:0000171!2.16e-07!14;UBERON:0000170!2.16e-07!14;UBERON:0005597!2.16e-07!14;UBERON:0000118!2.16e-07!14;UBERON:0009569!8.93e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,8.22e-22,6;UBERON:0004457,8.22e-22,6;UBERON:0000042,8.22e-22,6;UBERON:0004854,8.22e-22,6;UBERON:0009034,8.22e-22,6;UBERON:0002095,8.22e-22,6;UBERON:0004782,8.22e-22,6;UBERON:0003281,8.22e-22,6;UBERON:0009664,8.22e-22,6;UBERON:0002296,8.22e-22,6;UBERON:0005602,8.22e-22,6;UBERON:0001179,8.22e-22,6;UBERON:0006293,8.22e-22,6;UBERON:0003887,3.04e-13,10;UBERON:0002390,2.11e-08,45;UBERON:0003061,2.11e-08,45;UBERON:0000945,2.18e-08,16;UBERON:0010039,2.18e-08,16;UBERON:0002193,7.52e-08,48;UBERON:0002405,7.52e-08,48;UBERON:0002075,4.22e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999329285446988,1.01237633694913,0,4.10100814965709,4.38766187538364,0.84877930359606,0,0,0,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68452169692378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0.517875767294343,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0.441683036920787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597423819763102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324270453550071,0.823684239564244,2.87536413054709,0,0,0.252578877947112,0,0,0.184753190166605,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0.797273843287435,1.47476983244164,2.93564469172023,0.723245292907558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,1.36696704638282,0,0.185194527369712,1.88368457004691,7.79157098009843,5.71945433016307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0.201652370273681,0.0974578807397524,0.0962118416403295,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr16:19232696..19232701,+ | |||
}} |
Revision as of 12:08, 13 September 2013
Short description: | p@chr16:19232696..19232701, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:19232696..19232701, + |
Coexpression cluster: | MCL_coexpression_mm9:1030 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.20e-12 | 6 |
megakaryocyte | 1.20e-12 | 6 |
lymphocyte of B lineage | 3.04e-09 | 1 |
B cell | 3.04e-09 | 1 |
pro-B cell | 3.04e-09 | 1 |
megakaryocyte-erythroid progenitor cell | 1.25e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
spleen | 8.22e-22 | 6 |
cavity lining | 8.22e-22 | 6 |
serous membrane | 8.22e-22 | 6 |
gastrointestinal system mesentery | 8.22e-22 | 6 |
stomach region | 8.22e-22 | 6 |
mesentery | 8.22e-22 | 6 |
gastrointestinal system serosa | 8.22e-22 | 6 |
mesentery of stomach | 8.22e-22 | 6 |
gut mesentery | 8.22e-22 | 6 |
dorsal mesentery | 8.22e-22 | 6 |
dorsal mesogastrium | 8.22e-22 | 6 |
peritoneal cavity | 8.22e-22 | 6 |
spleen primordium | 8.22e-22 | 6 |
intraembryonic coelom | 3.04e-13 | 10 |
hematopoietic system | 2.11e-08 | 45 |
blood island | 2.11e-08 | 45 |
stomach | 2.18e-08 | 16 |
food storage organ | 2.18e-08 | 16 |
hemolymphoid system | 7.52e-08 | 48 |
immune system | 7.52e-08 | 48 |
viscus | 4.22e-07 | 19 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.