FFCP PHASE1:Mm9::chr5:139472179..139472217,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:139472179..139472217,+|id=chr5:139472179..139472217,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002250,8.39e-10,3;CL:0000213,2.98e-08,1;CL:0002078,2.98e-08,1;CL:0000115,2.98e-08,1;CL:0002262,2.98e-08,1;CL:1000398,2.98e-08,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!4.61e-08!18;UBERON:0000948!4.61e-08!18;UBERON:0005498!4.61e-08!18;UBERON:0004140!4.61e-08!18;UBERON:0009881!4.61e-08!18;UBERON:0004141!4.61e-08!18;UBERON:0003084!4.61e-08!18;UBERON:0007005!4.61e-08!18;UBERON:0004139!4.61e-08!18;UBERON:0004291!4.61e-08!18|ontology_enrichment_uberon_v019_2=UBERON:0001044,1.84e-08,1;UBERON:0001736,1.84e-08,1;UBERON:0003293,1.84e-08,1;UBERON:0003294,1.84e-08,1;UBERON:0001829,1.84e-08,1;UBERON:0010047,1.84e-08,1;UBERON:0000167,1.84e-08,1;UBERON:0006298,1.84e-08,1;UBERON:0002394,2.98e-08,1;UBERON:0001281,2.98e-08,1;UBERON:0000353,2.98e-08,1;UBERON:0003497,2.98e-08,1;UBERON:0003909,2.98e-08,1;UBERON:0003928,2.98e-08,1;UBERON:0003835,2.98e-08,1;UBERON:0003513,2.98e-08,1;UBERON:0001280,2.98e-08,1;UBERON:0004647,2.98e-08,1;UBERON:0002294,2.98e-08,1;UBERON:0001173,2.98e-08,1;UBERON:0004912,2.98e-08,1;UBERON:0005171,2.98e-08,1|phase1_expression=0.160148847104794,0,0,0.90739263392049,0.500895729946347,0.671517087647559,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.319984845586813,0,0,0,0.215471232685889,0,0.252030129759931,0.221730510655305,0,0,0,1.44425809875637,0.831173226792462,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0.285650984403804,0.220868540951614,0,0.0958454710182364,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0.142371680799103,0,0.227178579999552,0.0755715601067855,1.73918693221007,0,0.679971333707751,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0.161766849947409,0.441683036920787,0,0,0.292780797011547,0.209446706813455,0.255457055208591,0,0,0,0,0,0,0,0.511430914660661,0,0.324482526135515,0.101839363850316,0.373220911830279,0,0.210441855886474,0,0,0,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0.258703370739016,0,0.189106080167819,0.175951124163949,0,0.556094498451196,0,0,0,0,0,0,0.207125772535502,0.703578179943289,0.540186184383045,0.473489471170421,0.983821158737019,0.617068451549513,0.930135779001631,0,0.467061369468678,1.97471819896177,0.820837320395476,1.29710095273369,1.75439984910399,0.658650345873152,0.402619256281115,0,0.102904612379284,0,0,0.426576501070468,0,0,0.201683524623343,0.22237804384487,0.951128130562796,0,0.494096864172033,0.502670417600539,1.1937388322469,1.55971269695296,0,0,0,0,0.228497025219458,0,0.407302655690628,0.775809948670503,0.561086559122548,3.41477300470989,0.738050739898011,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0.169745085775188,0.469380496577004,0.167506257441816,0.238043640886014,0,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.329940245945071,0,0,0,0.377210159511796,0.295301892880773,1.53717573971964,1.03371317267288,0.363533729477506,0.712994756769443,0,0,0,0,0.18006109403131,0,0,0.532020700926821,0.178368817602071,0,0,0.23467170806371,0.21183207086382,0,0.32977250588296,0.807322133479528,0.482503399425247,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0.209088296014469,0.218362563746178,0,0.826534557253359,0.26175594198403,0.518459893167171,2.4853572523477,0,0.299033092087958,0,0,0.129159823477731,0,0.117357238645754,0,0.209718688851422,0,0,0,0.202725215290164,0,0,0,0,0.240390899039938,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,0,0,0.503653849092235,0.19318959403219,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0.51776031175182,0.207574695168353,0,0,0,0.209613162627982,0.551530525350042,0.666740183404846,0,0.320919209591815,0.252697211763798,0.50695859978048,0,0.37456602987953,0.256100609619477,0.229741875822453,0,0.347652977834566,0.77163688185482,0,0.735994600671987,1.37147700954166,0.354951612318675,0.238436189947321,0.290692833264657,0.188218760830661,0.169229215783353,0.548783918618318,0,0.271608227691724,0,0.355905054372522,0.29551344712669,0,0.464810523557898,0.192906610981141,0,0.467863216890817,0.214871054048298,0.382576664137687,0,0|short_description=p@chr5:139472179..139472217,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:139472179..139472217,+ | |||
|id=chr5:139472179..139472217,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,8.39e-10,3;CL:0000213,2.98e-08,1;CL:0002078,2.98e-08,1;CL:0000115,2.98e-08,1;CL:0002262,2.98e-08,1;CL:1000398,2.98e-08,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!4.61e-08!18;UBERON:0000948!4.61e-08!18;UBERON:0005498!4.61e-08!18;UBERON:0004140!4.61e-08!18;UBERON:0009881!4.61e-08!18;UBERON:0004141!4.61e-08!18;UBERON:0003084!4.61e-08!18;UBERON:0007005!4.61e-08!18;UBERON:0004139!4.61e-08!18;UBERON:0004291!4.61e-08!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,1.84e-08,1;UBERON:0001736,1.84e-08,1;UBERON:0003293,1.84e-08,1;UBERON:0003294,1.84e-08,1;UBERON:0001829,1.84e-08,1;UBERON:0010047,1.84e-08,1;UBERON:0000167,1.84e-08,1;UBERON:0006298,1.84e-08,1;UBERON:0002394,2.98e-08,1;UBERON:0001281,2.98e-08,1;UBERON:0000353,2.98e-08,1;UBERON:0003497,2.98e-08,1;UBERON:0003909,2.98e-08,1;UBERON:0003928,2.98e-08,1;UBERON:0003835,2.98e-08,1;UBERON:0003513,2.98e-08,1;UBERON:0001280,2.98e-08,1;UBERON:0004647,2.98e-08,1;UBERON:0002294,2.98e-08,1;UBERON:0001173,2.98e-08,1;UBERON:0004912,2.98e-08,1;UBERON:0005171,2.98e-08,1 | |||
|phase1_expression=0.160148847104794,0,0,0.90739263392049,0.500895729946347,0.671517087647559,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.319984845586813,0,0,0,0.215471232685889,0,0.252030129759931,0.221730510655305,0,0,0,1.44425809875637,0.831173226792462,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0.384218305321555,0,0,0,0.285650984403804,0.220868540951614,0,0.0958454710182364,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0.142371680799103,0,0.227178579999552,0.0755715601067855,1.73918693221007,0,0.679971333707751,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0.161766849947409,0.441683036920787,0,0,0.292780797011547,0.209446706813455,0.255457055208591,0,0,0,0,0,0,0,0.511430914660661,0,0.324482526135515,0.101839363850316,0.373220911830279,0,0.210441855886474,0,0,0,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0.258703370739016,0,0.189106080167819,0.175951124163949,0,0.556094498451196,0,0,0,0,0,0,0.207125772535502,0.703578179943289,0.540186184383045,0.473489471170421,0.983821158737019,0.617068451549513,0.930135779001631,0,0.467061369468678,1.97471819896177,0.820837320395476,1.29710095273369,1.75439984910399,0.658650345873152,0.402619256281115,0,0.102904612379284,0,0,0.426576501070468,0,0,0.201683524623343,0.22237804384487,0.951128130562796,0,0.494096864172033,0.502670417600539,1.1937388322469,1.55971269695296,0,0,0,0,0.228497025219458,0,0.407302655690628,0.775809948670503,0.561086559122548,3.41477300470989,0.738050739898011,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0.169745085775188,0.469380496577004,0.167506257441816,0.238043640886014,0,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,0.160550589987792,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.329940245945071,0,0,0,0.377210159511796,0.295301892880773,1.53717573971964,1.03371317267288,0.363533729477506,0.712994756769443,0,0,0,0,0.18006109403131,0,0,0.532020700926821,0.178368817602071,0,0,0.23467170806371,0.21183207086382,0,0.32977250588296,0.807322133479528,0.482503399425247,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0.209088296014469,0.218362563746178,0,0.826534557253359,0.26175594198403,0.518459893167171,2.4853572523477,0,0.299033092087958,0,0,0.129159823477731,0,0.117357238645754,0,0.209718688851422,0,0,0,0.202725215290164,0,0,0,0,0.240390899039938,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,0,0,0.503653849092235,0.19318959403219,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0.51776031175182,0.207574695168353,0,0,0,0.209613162627982,0.551530525350042,0.666740183404846,0,0.320919209591815,0.252697211763798,0.50695859978048,0,0.37456602987953,0.256100609619477,0.229741875822453,0,0.347652977834566,0.77163688185482,0,0.735994600671987,1.37147700954166,0.354951612318675,0.238436189947321,0.290692833264657,0.188218760830661,0.169229215783353,0.548783918618318,0,0.271608227691724,0,0.355905054372522,0.29551344712669,0,0.464810523557898,0.192906610981141,0,0.467863216890817,0.214871054048298,0.382576664137687,0,0 | |||
|short_description=p@chr5:139472179..139472217,+ | |||
}} |
Revision as of 06:50, 14 September 2013
Short description: | p@chr5:139472179..139472217, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:139472179..139472217, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 8.39e-10 | 3 |
lining cell | 2.98e-08 | 1 |
meso-epithelial cell | 2.98e-08 | 1 |
endothelial cell | 2.98e-08 | 1 |
endothelial cell of sinusoid | 2.98e-08 | 1 |
endothelial cell of hepatic sinusoid | 2.98e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 1.84e-08 | 1 |
submandibular gland | 1.84e-08 | 1 |
gland of oral region | 1.84e-08 | 1 |
gland of foregut | 1.84e-08 | 1 |
major salivary gland | 1.84e-08 | 1 |
oral gland | 1.84e-08 | 1 |
oral cavity | 1.84e-08 | 1 |
submandibular gland primordium | 1.84e-08 | 1 |
bile duct | 2.98e-08 | 1 |
hepatic sinusoid | 2.98e-08 | 1 |
parenchyma | 2.98e-08 | 1 |
abdomen blood vessel | 2.98e-08 | 1 |
sinusoid | 2.98e-08 | 1 |
digestive system duct | 2.98e-08 | 1 |
abdominal segment blood vessel | 2.98e-08 | 1 |
trunk blood vessel | 2.98e-08 | 1 |
liver parenchyma | 2.98e-08 | 1 |
liver lobule | 2.98e-08 | 1 |
biliary system | 2.98e-08 | 1 |
biliary tree | 2.98e-08 | 1 |
biliary bud | 2.98e-08 | 1 |
hepatic duct | 2.98e-08 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.