FFCP PHASE1:Mm9::chr5:35292013..35292018,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=71729|HGNC=|MCL_coexpression_id=52|UniProt=Q8CGE9|association_with_transcript=-75bp_to_ENSMUST00000030984_5end|description=CAGE_peak_9_at_Rgs12_5end|id=chr5:35292013..35292018,+|ontology_enrichment_celltype=CL:0000117!1.66e-07!23;CL:0000337!1.66e-07!23|ontology_enrichment_celltype_v019_2=CL:0002613,1.08e-17,3;CL:0000120,1.59e-17,3;CL:0000117,7.13e-14,23;CL:0000337,7.13e-14,23;CL:0000540,9.11e-10,33;CL:0000047,9.11e-10,33;CL:0000031,9.11e-10,33;CL:0000404,9.11e-10,33;CL:0000393,2.64e-08,39;CL:0000211,2.64e-08,39;CL:0002319,1.49e-07,43;CL:0000221,2.19e-07,44;CL:0000133,2.19e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!4.20e-07!71;UBERON:0003075!4.20e-07!71;UBERON:0007284!4.20e-07!71|ontology_enrichment_uberon_v019_2=UBERON:0000369,4.98e-11,5;UBERON:0002435,4.98e-11,5;UBERON:0000204,4.98e-11,5;UBERON:0010082,4.98e-11,5;UBERON:0002420,3.05e-07,8;UBERON:0007245,3.05e-07,8;UBERON:0010009,3.05e-07,8;UBERON:0010011,3.05e-07,8;UBERON:0000454,3.05e-07,8|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.17008658030214,0.0992909512008853,0,0,0,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.436050312760893,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,1.82084814773638,1.05798195854407,0,0,0,0,0,0,0,0.384218305321555,0.207379224616955,1.08004750665353,0.630974884054146,0,0.220868540951614,0.367472397644862,0.670918297127655,0.919218786610021,0,0.127687338085188,0.307213066512487,1.18697658957174,1.37231465403614,0.52091337055676,0,0,0,0.294628585473668,0.569486723196412,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0.259786004602869,0,0,0,0,7.11066703153331,0,0,0,0,0,0.148442139064825,0.346970653532272,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0.161766849947409,0,0,0,0.292780797011547,0,0,0.11981512450592,0,0,0,0,0.628271760564322,0,0,0,0.162241263067758,0.305518091550949,0,0,0,0.130120442962704,0.229902104433473,0,0.452114453507145,0.544291993210623,0.640568601424249,0.0937017245597288,0.258703370739016,0,0.189106080167819,0,0.43839146485515,0,0,0,0.398068533636986,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0.308534225774757,0,0.268273401399619,0.467061369468678,0.16455984991348,0,0,0,0.219550115291051,0.268412837520744,0.210289948564127,0.308713837137853,0,0,0,0.464473343720877,0.257734922644187,0,0,0,0,0.164698954724011,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0.561086559122548,0.126473074248515,0,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0.37898282354097,0.325929952884052,0.169745085775188,0,0.167506257441816,0.476087281772027,0.195133647857799,0,0.221464689648775,0.478364305972461,0,0.345369963731791,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0.646270193198397,0,0,0,0,0.292255857911312,0,0,0.283880170416537,0.178065603667255,0.162886959353576,0,0,0.485561272309963,0,0,0.295301892880773,0.307435147943927,0.258428293168221,0,0.356497378384721,0,0,0,0.340439605753788,0.18006109403131,0.388076051348264,0.643011105094777,0.177340233642274,1.07021290561242,0.493647061806363,0,0.23467170806371,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0.188368457004691,0.136694227721025,0,0.169978429993855,0.139951452323658,0,0,0.474503990371703,0.406638934253697,0,0,0.218362563746178,0,0.247960367176008,0,0,0,0.56369293868419,0.149516546043979,0.165458490457098,0.194451188344048,0,0.337912250981556,0,0,0.524296722128554,0.483168241652012,0.576060012515731,0,0.202725215290164,0.102710957164827,0,0,0,0.360586348559907,0.147689527174577,0.100966449948148,0.228620419965,0,0,0,0.116876902181569,0,0,0,0,0.19318959403219,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512200817262403,0,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0.187283014939765,0.256100609619477,0.0574354689556133,0,0.579421629724277,0,0.412085900803307,0,0,0.177475806159338,0,0,0.282328141245992,0.169229215783353,0.182927972872773,0,0.407412341537585,0,0.355905054372522,0.197008964751127,0,0.154936841185966,0,0.499621155875892,0,0.429742108096597,0.382576664137687,0.220591419119515,0|short_description=p9@Rgs12}} | ||
|EntrezGene=71729 | |||
|HGNC= | |||
|MCL_coexpression_id=52 | |||
|UniProt=Q8CGE9 | |||
|association_with_transcript=-75bp_to_ENSMUST00000030984_5end | |||
|description=CAGE_peak_9_at_Rgs12_5end | |||
|id=chr5:35292013..35292018,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.66e-07!23;CL:0000337!1.66e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,1.08e-17,3;CL:0000120,1.59e-17,3;CL:0000117,7.13e-14,23;CL:0000337,7.13e-14,23;CL:0000540,9.11e-10,33;CL:0000047,9.11e-10,33;CL:0000031,9.11e-10,33;CL:0000404,9.11e-10,33;CL:0000393,2.64e-08,39;CL:0000211,2.64e-08,39;CL:0002319,1.49e-07,43;CL:0000221,2.19e-07,44;CL:0000133,2.19e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!4.20e-07!71;UBERON:0003075!4.20e-07!71;UBERON:0007284!4.20e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,4.98e-11,5;UBERON:0002435,4.98e-11,5;UBERON:0000204,4.98e-11,5;UBERON:0010082,4.98e-11,5;UBERON:0002420,3.05e-07,8;UBERON:0007245,3.05e-07,8;UBERON:0010009,3.05e-07,8;UBERON:0010011,3.05e-07,8;UBERON:0000454,3.05e-07,8 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.17008658030214,0.0992909512008853,0,0,0,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.436050312760893,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,1.82084814773638,1.05798195854407,0,0,0,0,0,0,0,0.384218305321555,0.207379224616955,1.08004750665353,0.630974884054146,0,0.220868540951614,0.367472397644862,0.670918297127655,0.919218786610021,0,0.127687338085188,0.307213066512487,1.18697658957174,1.37231465403614,0.52091337055676,0,0,0,0.294628585473668,0.569486723196412,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0.259786004602869,0,0,0,0,7.11066703153331,0,0,0,0,0,0.148442139064825,0.346970653532272,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0.161766849947409,0,0,0,0.292780797011547,0,0,0.11981512450592,0,0,0,0,0.628271760564322,0,0,0,0.162241263067758,0.305518091550949,0,0,0,0.130120442962704,0.229902104433473,0,0.452114453507145,0.544291993210623,0.640568601424249,0.0937017245597288,0.258703370739016,0,0.189106080167819,0,0.43839146485515,0,0,0,0.398068533636986,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0.308534225774757,0,0.268273401399619,0.467061369468678,0.16455984991348,0,0,0,0.219550115291051,0.268412837520744,0.210289948564127,0.308713837137853,0,0,0,0.464473343720877,0.257734922644187,0,0,0,0,0.164698954724011,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0.561086559122548,0.126473074248515,0,0.156998727841375,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0.37898282354097,0.325929952884052,0.169745085775188,0,0.167506257441816,0.476087281772027,0.195133647857799,0,0.221464689648775,0.478364305972461,0,0.345369963731791,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0.646270193198397,0,0,0,0,0.292255857911312,0,0,0.283880170416537,0.178065603667255,0.162886959353576,0,0,0.485561272309963,0,0,0.295301892880773,0.307435147943927,0.258428293168221,0,0.356497378384721,0,0,0,0.340439605753788,0.18006109403131,0.388076051348264,0.643011105094777,0.177340233642274,1.07021290561242,0.493647061806363,0,0.23467170806371,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0.188368457004691,0.136694227721025,0,0.169978429993855,0.139951452323658,0,0,0.474503990371703,0.406638934253697,0,0,0.218362563746178,0,0.247960367176008,0,0,0,0.56369293868419,0.149516546043979,0.165458490457098,0.194451188344048,0,0.337912250981556,0,0,0.524296722128554,0.483168241652012,0.576060012515731,0,0.202725215290164,0.102710957164827,0,0,0,0.360586348559907,0.147689527174577,0.100966449948148,0.228620419965,0,0,0,0.116876902181569,0,0,0,0,0.19318959403219,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512200817262403,0,0,0,0,0.206035057238894,0,0,0,0.188626341386076,0.187283014939765,0.256100609619477,0.0574354689556133,0,0.579421629724277,0,0.412085900803307,0,0,0.177475806159338,0,0,0.282328141245992,0.169229215783353,0.182927972872773,0,0.407412341537585,0,0.355905054372522,0.197008964751127,0,0.154936841185966,0,0.499621155875892,0,0.429742108096597,0.382576664137687,0.220591419119515,0 | |||
|short_description=p9@Rgs12 | |||
}} |
Revision as of 07:32, 14 September 2013
Short description: | p9@Rgs12 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Rgs12_5end |
Coexpression cluster: | MCL_coexpression_mm9:52 |
Association with transcript: | -75bp_to_ENSMUST00000030984_5end |
EntrezGene: | Rgs12 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 1.08e-17 | 3 |
granule cell | 1.59e-17 | 3 |
CNS neuron (sensu Vertebrata) | 7.13e-14 | 23 |
neuroblast (sensu Vertebrata) | 7.13e-14 | 23 |
neuron | 9.11e-10 | 33 |
neuronal stem cell | 9.11e-10 | 33 |
neuroblast | 9.11e-10 | 33 |
electrically signaling cell | 9.11e-10 | 33 |
electrically responsive cell | 2.64e-08 | 39 |
electrically active cell | 2.64e-08 | 39 |
neural cell | 1.49e-07 | 43 |
ectodermal cell | 2.19e-07 | 44 |
neurectodermal cell | 2.19e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 4.98e-11 | 5 |
striatum | 4.98e-11 | 5 |
ventral part of telencephalon | 4.98e-11 | 5 |
future corpus striatum | 4.98e-11 | 5 |
basal ganglion | 3.05e-07 | 8 |
nuclear complex of neuraxis | 3.05e-07 | 8 |
aggregate regional part of brain | 3.05e-07 | 8 |
collection of basal ganglia | 3.05e-07 | 8 |
cerebral subcortex | 3.05e-07 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.