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FFCP PHASE1:Mm9::chr1:188529442..188529477,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=21808|HGNC=|MCL_coexpression_id=41|UniProt=E9Q1R0|association_with_transcript=-273bp_to_ENSMUST00000085692_5end|description=CAGE_peak_5_at_Tgfb2_5end|id=chr1:188529442..188529477,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000107,8.16e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005153!1.84e-09!17;UBERON:0004121!1.18e-08!102;UBERON:0000924!1.18e-08!102;UBERON:0006601!1.18e-08!102;UBERON:0004111!3.69e-08!122;UBERON:0002048!1.33e-07!14;UBERON:0000117!1.33e-07!14;UBERON:0000171!1.33e-07!14;UBERON:0000170!1.33e-07!14;UBERON:0005597!1.33e-07!14;UBERON:0000118!1.33e-07!14;UBERON:0000468!1.62e-07!333;UBERON:0005085!4.11e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0005157,1.16e-12,20;UBERON:0005153,9.56e-11,17;UBERON:0005085,1.36e-08,13;UBERON:0002048,1.98e-08,14;UBERON:0000117,1.98e-08,14;UBERON:0000171,1.98e-08,14;UBERON:0000170,1.98e-08,14;UBERON:0005597,1.98e-08,14;UBERON:0000118,1.98e-08,14;UBERON:0000033,3.74e-08,13;UBERON:0004121,4.08e-08,95;UBERON:0000924,4.08e-08,95;UBERON:0006601,4.08e-08,95;UBERON:0004535,7.10e-08,23;UBERON:0001009,7.10e-08,23;UBERON:0000020,2.65e-07,12;UBERON:0001032,2.65e-07,12;UBERON:0004456,2.65e-07,12;UBERON:0004111,7.82e-07,122;UBERON:0002410,8.16e-07,9;UBERON:0001444,9.82e-07,11|phase1_expression=3.20297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64383317748712,2.53442328048786,1.65192076945513,0.782391344348039,4.79655344036982,6.59058548203415,11.665793944457,1.53985063787899,2.87505128729943,0,0,0,1.02903774414379,2.57880095944881,2.06268836910977,0,0,0.633831403506179,0.338844532069132,0.889294796111139,0,0,0,2.39680088414724,2.68952813725088,0.622137673850866,0.135005938331691,0.420649922702764,1.14260393761521,1.32521124570968,0,0.0958454710182364,0.919218786610021,1.10115880999389,0.766124028511126,1.22885226604995,0.131886287730194,0.182975287204819,0.52091337055676,0.837548997004143,1.68828783009504,0.45839474333043,2.35702868378934,1.42371680799103,0.559198337475902,0.075726193333184,0,3.47837386442013,0,0,0,0,0,0.842666520790511,1.53387290320252,0.779358013808606,0.70667914902068,4.3661460130771,3.84979432242953,2.54805239706646,7.11066703153331,0,0,0.505524445014783,0.22836775943812,0,0.29688427812965,0,0.608930956624282,0.230615497256059,0.150722640552623,0.470354828542819,0,0.741584903203122,3.32578520915797,0.884610551949874,1.7794353494215,2.42925670306433,1.45462575940567,0,1.17112318804619,0.628340120440365,0.255457055208591,0,0,0,0.449371918214468,0,0.376963056338593,1.04294592115366,1.79000820131231,1.0389402227978,0.486723789203273,1.42575109390443,0.995255764880744,0.758168275301024,2.31486041475121,2.60240885925407,2.75882525320168,2.16074555766419,1.80845781402858,2.9255694635071,1.66547836370305,1.21812241927647,5.95017752699736,0.862271971731369,1.51284864134255,1.93546236580344,1.53437012699302,1.11218899690239,1.74126083261083,2.46938563689532,0.398068533636986,0,0,0,1.24275463521301,1.40715635988658,1.62055855314913,2.60419209143731,0.393528463494808,1.23413690309903,1.62773761325285,1.3413670069981,1.40118410840603,1.31647879930784,1.47750717671186,2.67527071501324,2.04679982395465,1.75640092232841,1.07365135008297,3.78521907415429,2.05809224758569,0,0,0.426576501070468,0.464473343720877,0.257734922644187,0.403367049246685,0,0.190225626112559,0,0.329397909448022,0,0.596869416123452,0.38992817423824,0.898819408654221,0.864552199498777,0.398282546508734,0.189667900953082,0.571242563048644,0,1.01825663922657,0.581857461502877,0.350679099451593,0.758838445491087,0.590440591918409,0.31399745568275,0.246794327843601,0.296452627087149,0.333690211432188,0.196558995113203,0,0.202860121388503,0,0.25462585178142,0,0,0,1.43768206527355,0,0.312037673114561,0.757736633841335,0,0.964887042726734,2.21703828199926,0.947457058852424,1.95557971730431,2.71592137240301,4.69380496577004,4.02015017860358,4.04674189506223,1.95133647857799,5.2019597555043,3.5434350343804,4.78364305972461,2.94953966488328,2.24490476425664,2.02508682014116,0,0,3.44234991113325,6.89841865761831,0.642202359951168,1.05490517932983,0,2.7771801992481,2.83957397474631,2.73307121007647,3.01592756825919,5.25731355495614,3.56477878531831,1.98153571552183,3.23848561339915,1.46127928955656,3.55759000151871,2.24924921495265,0.567760340833074,1.6025904330053,0.81443479676788,1.64970122972535,1.32745138339963,0.242780636154981,0,0.377210159511796,0,1.22974059177571,0.258428293168221,0.363533729477506,0.712994756769443,0.316036757935816,0,0,1.02131881726136,1.62054984628179,1.68166288917581,1.71469628025274,1.06404140185364,0.535106452806212,1.15184314421485,0.913394847343798,2.3467170806371,3.60114520468494,4.41056796109924,3.62749756471256,1.13025098687134,0.844380948994182,0.716234064018819,1.14898629821543,0,0.927126510052548,0.170870880797853,0,0.185194527369712,0,0.136694227721025,0,0,0,0,1.90934123603023,0.474503990371703,0.203319467126849,0.216010681643603,0.209088296014469,0.87345025498471,0.539457385539283,0.909188012978695,0.785267825952089,0,32.3096442805201,0,1.34564891439581,0.827292452285488,0.972255941720238,2.32487682259916,1.68956125490778,1.87771581833206,0.39061315453185,0.419437377702843,0.483168241652012,0.288030006257865,0,0.608175645870493,0.102710957164827,0,0.179026695667481,0.198681354781265,0.120195449519969,0.295379054349154,0.302899349844443,0,0.302478555410522,0,0,0,1.58711268530648,0.443971906748129,0.179427713218951,1.17519231454855,1.73870634628971,3.19060208267009,0.183151624267265,0.643105137237198,1.00314420807073,0.564751842617067,0.460325236507177,4.01026859407578,1.20297227640581,0.685082519770642,0.755393897389701,0,0.900642406448441,1.81256963593682,1.03552062350364,0.93408612825759,1.19707462020309,0.170733605754134,0.729320151204882,1.04806581313991,0.919217542250071,0.666740183404846,0.618105171716683,2.24643446714271,1.01078884705519,1.52087579934144,0.943131706930381,1.591905626988,0.576226371643824,1.20614484806788,1.42888107384922,0.695305955669133,0.964546102318525,1.23625770240992,1.03039244094078,1.37147700954166,1.06485483695602,0.953744759789284,2.18019624948493,0.752875043322645,1.18460451048347,0.73171189149109,1.8414879800649,1.22223702461276,0.561142271657738,0.830445126869219,0.788035859004508,1.22769312950907,1.85924209423159,1.54325288784913,0.999242311751784,1.16965804222704,1.28922632428979,1.53030665655075,1.54413993383661,4.40548887678801|short_description=p5@Tgfb2}}
|EntrezGene=21808
|HGNC=
|MCL_coexpression_id=41
|UniProt=E9Q1R0
|association_with_transcript=-273bp_to_ENSMUST00000085692_5end
|description=CAGE_peak_5_at_Tgfb2_5end
|id=chr1:188529442..188529477,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000107,8.16e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005153!1.84e-09!17;UBERON:0004121!1.18e-08!102;UBERON:0000924!1.18e-08!102;UBERON:0006601!1.18e-08!102;UBERON:0004111!3.69e-08!122;UBERON:0002048!1.33e-07!14;UBERON:0000117!1.33e-07!14;UBERON:0000171!1.33e-07!14;UBERON:0000170!1.33e-07!14;UBERON:0005597!1.33e-07!14;UBERON:0000118!1.33e-07!14;UBERON:0000468!1.62e-07!333;UBERON:0005085!4.11e-07!13
|ontology_enrichment_uberon_v019_2=UBERON:0005157,1.16e-12,20;UBERON:0005153,9.56e-11,17;UBERON:0005085,1.36e-08,13;UBERON:0002048,1.98e-08,14;UBERON:0000117,1.98e-08,14;UBERON:0000171,1.98e-08,14;UBERON:0000170,1.98e-08,14;UBERON:0005597,1.98e-08,14;UBERON:0000118,1.98e-08,14;UBERON:0000033,3.74e-08,13;UBERON:0004121,4.08e-08,95;UBERON:0000924,4.08e-08,95;UBERON:0006601,4.08e-08,95;UBERON:0004535,7.10e-08,23;UBERON:0001009,7.10e-08,23;UBERON:0000020,2.65e-07,12;UBERON:0001032,2.65e-07,12;UBERON:0004456,2.65e-07,12;UBERON:0004111,7.82e-07,122;UBERON:0002410,8.16e-07,9;UBERON:0001444,9.82e-07,11
|phase1_expression=3.20297694209588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64383317748712,2.53442328048786,1.65192076945513,0.782391344348039,4.79655344036982,6.59058548203415,11.665793944457,1.53985063787899,2.87505128729943,0,0,0,1.02903774414379,2.57880095944881,2.06268836910977,0,0,0.633831403506179,0.338844532069132,0.889294796111139,0,0,0,2.39680088414724,2.68952813725088,0.622137673850866,0.135005938331691,0.420649922702764,1.14260393761521,1.32521124570968,0,0.0958454710182364,0.919218786610021,1.10115880999389,0.766124028511126,1.22885226604995,0.131886287730194,0.182975287204819,0.52091337055676,0.837548997004143,1.68828783009504,0.45839474333043,2.35702868378934,1.42371680799103,0.559198337475902,0.075726193333184,0,3.47837386442013,0,0,0,0,0,0.842666520790511,1.53387290320252,0.779358013808606,0.70667914902068,4.3661460130771,3.84979432242953,2.54805239706646,7.11066703153331,0,0,0.505524445014783,0.22836775943812,0,0.29688427812965,0,0.608930956624282,0.230615497256059,0.150722640552623,0.470354828542819,0,0.741584903203122,3.32578520915797,0.884610551949874,1.7794353494215,2.42925670306433,1.45462575940567,0,1.17112318804619,0.628340120440365,0.255457055208591,0,0,0,0.449371918214468,0,0.376963056338593,1.04294592115366,1.79000820131231,1.0389402227978,0.486723789203273,1.42575109390443,0.995255764880744,0.758168275301024,2.31486041475121,2.60240885925407,2.75882525320168,2.16074555766419,1.80845781402858,2.9255694635071,1.66547836370305,1.21812241927647,5.95017752699736,0.862271971731369,1.51284864134255,1.93546236580344,1.53437012699302,1.11218899690239,1.74126083261083,2.46938563689532,0.398068533636986,0,0,0,1.24275463521301,1.40715635988658,1.62055855314913,2.60419209143731,0.393528463494808,1.23413690309903,1.62773761325285,1.3413670069981,1.40118410840603,1.31647879930784,1.47750717671186,2.67527071501324,2.04679982395465,1.75640092232841,1.07365135008297,3.78521907415429,2.05809224758569,0,0,0.426576501070468,0.464473343720877,0.257734922644187,0.403367049246685,0,0.190225626112559,0,0.329397909448022,0,0.596869416123452,0.38992817423824,0.898819408654221,0.864552199498777,0.398282546508734,0.189667900953082,0.571242563048644,0,1.01825663922657,0.581857461502877,0.350679099451593,0.758838445491087,0.590440591918409,0.31399745568275,0.246794327843601,0.296452627087149,0.333690211432188,0.196558995113203,0,0.202860121388503,0,0.25462585178142,0,0,0,1.43768206527355,0,0.312037673114561,0.757736633841335,0,0.964887042726734,2.21703828199926,0.947457058852424,1.95557971730431,2.71592137240301,4.69380496577004,4.02015017860358,4.04674189506223,1.95133647857799,5.2019597555043,3.5434350343804,4.78364305972461,2.94953966488328,2.24490476425664,2.02508682014116,0,0,3.44234991113325,6.89841865761831,0.642202359951168,1.05490517932983,0,2.7771801992481,2.83957397474631,2.73307121007647,3.01592756825919,5.25731355495614,3.56477878531831,1.98153571552183,3.23848561339915,1.46127928955656,3.55759000151871,2.24924921495265,0.567760340833074,1.6025904330053,0.81443479676788,1.64970122972535,1.32745138339963,0.242780636154981,0,0.377210159511796,0,1.22974059177571,0.258428293168221,0.363533729477506,0.712994756769443,0.316036757935816,0,0,1.02131881726136,1.62054984628179,1.68166288917581,1.71469628025274,1.06404140185364,0.535106452806212,1.15184314421485,0.913394847343798,2.3467170806371,3.60114520468494,4.41056796109924,3.62749756471256,1.13025098687134,0.844380948994182,0.716234064018819,1.14898629821543,0,0.927126510052548,0.170870880797853,0,0.185194527369712,0,0.136694227721025,0,0,0,0,1.90934123603023,0.474503990371703,0.203319467126849,0.216010681643603,0.209088296014469,0.87345025498471,0.539457385539283,0.909188012978695,0.785267825952089,0,32.3096442805201,0,1.34564891439581,0.827292452285488,0.972255941720238,2.32487682259916,1.68956125490778,1.87771581833206,0.39061315453185,0.419437377702843,0.483168241652012,0.288030006257865,0,0.608175645870493,0.102710957164827,0,0.179026695667481,0.198681354781265,0.120195449519969,0.295379054349154,0.302899349844443,0,0.302478555410522,0,0,0,1.58711268530648,0.443971906748129,0.179427713218951,1.17519231454855,1.73870634628971,3.19060208267009,0.183151624267265,0.643105137237198,1.00314420807073,0.564751842617067,0.460325236507177,4.01026859407578,1.20297227640581,0.685082519770642,0.755393897389701,0,0.900642406448441,1.81256963593682,1.03552062350364,0.93408612825759,1.19707462020309,0.170733605754134,0.729320151204882,1.04806581313991,0.919217542250071,0.666740183404846,0.618105171716683,2.24643446714271,1.01078884705519,1.52087579934144,0.943131706930381,1.591905626988,0.576226371643824,1.20614484806788,1.42888107384922,0.695305955669133,0.964546102318525,1.23625770240992,1.03039244094078,1.37147700954166,1.06485483695602,0.953744759789284,2.18019624948493,0.752875043322645,1.18460451048347,0.73171189149109,1.8414879800649,1.22223702461276,0.561142271657738,0.830445126869219,0.788035859004508,1.22769312950907,1.85924209423159,1.54325288784913,0.999242311751784,1.16965804222704,1.28922632428979,1.53030665655075,1.54413993383661,4.40548887678801
|short_description=p5@Tgfb2
}}

Revision as of 20:02, 13 September 2013

Short description:p5@Tgfb2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Tgfb2_5end
Coexpression cluster:MCL_coexpression_mm9:41
Association with transcript: -273bp_to_ENSMUST00000085692_5end
EntrezGene:Tgfb2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Tgfb2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.20
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.53
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.65
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.80
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B86.59
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C311.67
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.54
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.42
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.84
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.69
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.46
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G33.48
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.37
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H13.33
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.78
bone (os femoris), neonate N16.CNhs11225.1525-43A62.43
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.43
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.00
epididymis, adult.CNhs10490.58-23B20.76
eyeball, adult.CNhs10484.31-12G42.31
eyeball, embryo E12.CNhs11016.345-16C62.60
eyeball, embryo E14.CNhs10521.399-16E22.76
eyeball, embryo E15.CNhs10593.426-16C92.16
eyeball, embryo E17.CNhs11023.1261-18D41.81
eyeball, neonate N00.CNhs11207.633-15C62.93
eyeball, neonate N01.CNhs11140.1532-43E71.67
eyeball, neonate N02.CNhs11205.1551-44G81.22
eyeball, neonate N16.CNhs11188.777-19A25.95
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E21.94
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C41.74
forelimb, embryo E18.CNhs11008.1520-43B52.47
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I91.62
heart, embryo E14.CNhs10597.403-26D42.60
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E51.63
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E31.40
heart, neonate N03.CNhs11221.1349-25I21.32
heart, neonate N10.CNhs11118.749-24G11.48
heart, neonate N16.CNhs11209.782-15G12.68
heart, neonate N20.CNhs11127.821-26I62.05
heart, neonate N25.CNhs11196.1351-25D31.76
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E83.79
hippocampus, neonate N00.CNhs11228.627-43G12.06
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.86
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.76
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.76
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B12.22
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F81.96
lung, embryo E15.CNhs11020.432-17C52.72
lung, embryo E16.CNhs10998.458-17B64.69
lung, embryo E17.CNhs10605.480-44A64.02
lung, embryo E18.CNhs10583.1287-20I64.05
lung, neonate N00.CNhs11224.640-42C61.95
lung, neonate N06.CNhs11212.683-20E55.20
lung, neonate N07.CNhs11111.715-19A33.54
lung, neonate N10.CNhs11219.750-23E64.78
lung, neonate N20.CNhs11109.822-18A42.95
lung, neonate N25.CNhs11119.1359-25C72.24
lung, neonate N30.CNhs11133.1394-42H22.03
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B63.44
mammary gland, adult pregnant day19.CNhs10476.588-5H26.90
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A31.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.78
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.84
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.02
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D75.26
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.56
olfactory brain, adult.CNhs10489.18-22I92.25
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H71.60
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E61.62
pituitary gland, embryo E13.CNhs11009.370-44C71.68
pituitary gland, embryo E14.CNhs11037.398-44A51.71
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I72.35
placenta, adult pregnant day17.CNhs10464.577-18G33.60
prostate, adult.CNhs10470.859-1F84.41
skin, adult.CNhs10492.30-1C33.63
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H30.84
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C41.15
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.91
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C132.31
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.35
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I52.32
testis, embryo E18.CNhs11027.503-18G51.69
testis, neonate N00.CNhs11189.1300-22B71.88
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.59
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.18
urinary bladder, adult.CNhs10481.879-12E41.74
uterus, adult pregnant day19.CNhs10497.590-15F53.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.21
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.06
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.86
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C61.53
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B44.41





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
autonomic neuron8.16e-079

Uber anatomy
Ontology termp-valuen
epithelial fold1.16e-1220
epithelial bud9.56e-1117
ectodermal placode1.36e-0813
lung1.98e-0814
respiratory tube1.98e-0814
respiration organ1.98e-0814
pair of lungs1.98e-0814
lung primordium1.98e-0814
lung bud1.98e-0814
head3.74e-0813
ectoderm-derived structure4.08e-0895
ectoderm4.08e-0895
presumptive ectoderm4.08e-0895
cardiovascular system7.10e-0823
circulatory system7.10e-0823
sense organ2.65e-0712
sensory system2.65e-0712
entire sense organ system2.65e-0712
anatomical conduit7.82e-07122
autonomic nervous system8.16e-079
subdivision of head9.82e-0711







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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