FFCP PHASE1:Mm9::chrX:166123186..166123211,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=17318|HGNC=|MCL_coexpression_id=52|UniProt=O70583,Q3TVH5|association_with_transcript=7bp_to_NM_010797,uc009uxz.1,uc009uya.1_5end|description=CAGE_peak_3_at_Mid1_5end|id=chrX:166123186..166123211,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!8.89e-09!23;UBERON:0001009!8.89e-09!23;UBERON:0007100!3.60e-07!18;UBERON:0000948!3.60e-07!18;UBERON:0005498!3.60e-07!18;UBERON:0004140!3.60e-07!18;UBERON:0009881!3.60e-07!18;UBERON:0004141!3.60e-07!18;UBERON:0003084!3.60e-07!18;UBERON:0007005!3.60e-07!18;UBERON:0004139!3.60e-07!18;UBERON:0004291!3.60e-07!18|ontology_enrichment_uberon_v019_2=UBERON:0004535,5.66e-10,23;UBERON:0001009,5.66e-10,23;UBERON:0007100,2.95e-08,18;UBERON:0000948,2.95e-08,18;UBERON:0005498,2.95e-08,18;UBERON:0004140,2.95e-08,18;UBERON:0009881,2.95e-08,18;UBERON:0004141,2.95e-08,18;UBERON:0003084,2.95e-08,18;UBERON:0007005,2.95e-08,18;UBERON:0004139,2.95e-08,18;UBERON:0004291,2.95e-08,18|phase1_expression=0.480446541314382,0,0,0,0.500895729946347,0.33575854382378,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0.159992422793407,0,0,0,0.215471232685889,0.570070258369122,0.504060259519861,0,0,0,0,1.1554064790051,0.498703936075477,1.22501613757421,0,0,0,0,0,0,13.8486499773135,13.4831318521954,4.22157529971868,3.9119567217402,1.09012578190223,0.659058548203415,1.94429899074283,0.139986421625363,0,0,0,0,1.02903774414379,1.14613375975503,2.57836046138721,0.202316460859598,0,0,2.37191172448392,0.889294796111139,0,0,0.7104801149461,1.19840044207362,0.384218305321555,0,0,0,0,0.220868540951614,0,0,0,0,0.510749352340751,0,0.131886287730194,0.0914876436024097,0,0,0,0,0,0.142371680799103,0,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.140444420131752,9.54409806437123,4.93593408745451,7.42013106471715,0.845060518660083,30.7983545794363,30.5766287647975,49.7746692207332,0,0,0,0.5709193985953,0.258937883647172,3.56261133755579,1.90833859442749,1.82679286987285,0,1.95939432718409,2.82212897125692,1.25666591329675,0.494389935468748,2.31358971071859,0,2.10296904931632,0.220841518460394,1.93950101254089,0,0.292780797011547,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,1.83310854930569,0.373220911830279,0,1.05220927943237,2.34216797332867,0.919608417733892,1.44049703844279,2.10986744970001,0.748401490664606,1.2811372028485,1.78033276663485,2.58703370739016,0.646703978798527,3.21480336285293,3.34307135911503,1.09597866213787,4.72680323683516,3.83077383174383,3.49829631893504,0.59710280045548,0,0,0,2.07125772535502,1.64168241986767,3.96136535214233,4.49814997611899,5.3126342571799,5.24508183817086,3.48800917125612,2.95100741539581,3.85325629811659,3.62031669809657,2.79084688934462,2.1888578577381,2.33919979880532,1.3173006917463,1.34206418760372,0.210289948564127,0.411618449517138,0.330418782983798,0.528901133327089,2.77274725695804,4.18026009348789,2.44848176511977,0.605050573870028,0.667134131534611,0.760902504450237,0.474529061544512,0.329397909448022,1.50801125280162,1.39269530428806,1.36474860983384,0,0.648414149624083,0.597423819763102,0.758671603812327,0.456994050438915,0,0.610953983535943,1.74557238450863,0.701358198903186,1.26473074248515,0.147610147979602,0.156998727841375,0.246794327843601,0,0.166845105716094,0.786235980452812,0.449724224769707,0.202860121388503,0.482354319504834,0.25462585178142,0.863088412352432,0,0.274561413188081,0,0,0.624075346229121,0.252578877947112,0,0,1.29327233116623,0.757965647081939,2.28150967018836,0.678980343100753,0.938760993154008,2.34508760418542,1.19021820443007,1.17080188714679,0.945810864637146,1.55025282754142,0.956728611944923,1.3109065177259,1.20879487306127,1.88043776155965,0,0,1.47529281905711,0.275936746304732,0.481651769963376,0,4.91804836130026,0.504941854408746,1.26203287766503,2.73307121007647,1.07711698866399,0.477937595905104,0.222798674082394,0.566153061577665,0.809621403349789,2.04579100537918,0.395287777946524,0.321321316421807,3.12268187458191,0.890328018336276,1.30309567482861,2.96946221350564,5.30980553359851,2.18502572539483,1.81394134178851,2.64047111658257,0.590603785761546,1.22974059177571,1.55056975900933,2.18120237686503,3.20847640546249,3.16036757935816,2.10837217149998,6.18813259489121,0,0.900305470156551,0.646793418913773,1.07168517515796,1.41872186913819,2.49716344642899,2.13913726782757,0.913394847343798,0.704015124191131,0.42366414172764,0.661585194164886,1.48397627647332,2.58343082713449,1.32688434841943,2.50681922406587,2.1338316966858,0.874442509889552,0,0.170870880797853,0,0,0,0,0,0,0,0,0,1.58167996790568,3.04979200690273,1.83609079397062,2.29997125615916,2.40198820120795,1.34864346384821,1.90102948168273,1.04702376793612,1.16653475962614,1.24267862617385,0,0.299033092087958,0,0.194451188344048,1.16243841129958,0.506868376472335,0.58678619322877,0.5208175393758,0.524296722128554,0,0.288030006257865,1.26404448251271,3.44632865993279,2.77319584345034,1.68897069871134,1.25318686967237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| ||
|EntrezGene=17318 | |||
|HGNC= | |||
|MCL_coexpression_id=52 | |||
|UniProt=O70583,Q3TVH5 | |||
|association_with_transcript=7bp_to_NM_010797,uc009uxz.1,uc009uya.1_5end | |||
|description=CAGE_peak_3_at_Mid1_5end | |||
|id=chrX:166123186..166123211,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!8.89e-09!23;UBERON:0001009!8.89e-09!23;UBERON:0007100!3.60e-07!18;UBERON:0000948!3.60e-07!18;UBERON:0005498!3.60e-07!18;UBERON:0004140!3.60e-07!18;UBERON:0009881!3.60e-07!18;UBERON:0004141!3.60e-07!18;UBERON:0003084!3.60e-07!18;UBERON:0007005!3.60e-07!18;UBERON:0004139!3.60e-07!18;UBERON:0004291!3.60e-07!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,5.66e-10,23;UBERON:0001009,5.66e-10,23;UBERON:0007100,2.95e-08,18;UBERON:0000948,2.95e-08,18;UBERON:0005498,2.95e-08,18;UBERON:0004140,2.95e-08,18;UBERON:0009881,2.95e-08,18;UBERON:0004141,2.95e-08,18;UBERON:0003084,2.95e-08,18;UBERON:0007005,2.95e-08,18;UBERON:0004139,2.95e-08,18;UBERON:0004291,2.95e-08,18 | |||
|phase1_expression=0.480446541314382,0,0,0,0.500895729946347,0.33575854382378,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0.159992422793407,0,0,0,0.215471232685889,0.570070258369122,0.504060259519861,0,0,0,0,1.1554064790051,0.498703936075477,1.22501613757421,0,0,0,0,0,0,13.8486499773135,13.4831318521954,4.22157529971868,3.9119567217402,1.09012578190223,0.659058548203415,1.94429899074283,0.139986421625363,0,0,0,0,1.02903774414379,1.14613375975503,2.57836046138721,0.202316460859598,0,0,2.37191172448392,0.889294796111139,0,0,0.7104801149461,1.19840044207362,0.384218305321555,0,0,0,0,0.220868540951614,0,0,0,0,0.510749352340751,0,0.131886287730194,0.0914876436024097,0,0,0,0,0,0.142371680799103,0,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.140444420131752,9.54409806437123,4.93593408745451,7.42013106471715,0.845060518660083,30.7983545794363,30.5766287647975,49.7746692207332,0,0,0,0.5709193985953,0.258937883647172,3.56261133755579,1.90833859442749,1.82679286987285,0,1.95939432718409,2.82212897125692,1.25666591329675,0.494389935468748,2.31358971071859,0,2.10296904931632,0.220841518460394,1.93950101254089,0,0.292780797011547,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,1.83310854930569,0.373220911830279,0,1.05220927943237,2.34216797332867,0.919608417733892,1.44049703844279,2.10986744970001,0.748401490664606,1.2811372028485,1.78033276663485,2.58703370739016,0.646703978798527,3.21480336285293,3.34307135911503,1.09597866213787,4.72680323683516,3.83077383174383,3.49829631893504,0.59710280045548,0,0,0,2.07125772535502,1.64168241986767,3.96136535214233,4.49814997611899,5.3126342571799,5.24508183817086,3.48800917125612,2.95100741539581,3.85325629811659,3.62031669809657,2.79084688934462,2.1888578577381,2.33919979880532,1.3173006917463,1.34206418760372,0.210289948564127,0.411618449517138,0.330418782983798,0.528901133327089,2.77274725695804,4.18026009348789,2.44848176511977,0.605050573870028,0.667134131534611,0.760902504450237,0.474529061544512,0.329397909448022,1.50801125280162,1.39269530428806,1.36474860983384,0,0.648414149624083,0.597423819763102,0.758671603812327,0.456994050438915,0,0.610953983535943,1.74557238450863,0.701358198903186,1.26473074248515,0.147610147979602,0.156998727841375,0.246794327843601,0,0.166845105716094,0.786235980452812,0.449724224769707,0.202860121388503,0.482354319504834,0.25462585178142,0.863088412352432,0,0.274561413188081,0,0,0.624075346229121,0.252578877947112,0,0,1.29327233116623,0.757965647081939,2.28150967018836,0.678980343100753,0.938760993154008,2.34508760418542,1.19021820443007,1.17080188714679,0.945810864637146,1.55025282754142,0.956728611944923,1.3109065177259,1.20879487306127,1.88043776155965,0,0,1.47529281905711,0.275936746304732,0.481651769963376,0,4.91804836130026,0.504941854408746,1.26203287766503,2.73307121007647,1.07711698866399,0.477937595905104,0.222798674082394,0.566153061577665,0.809621403349789,2.04579100537918,0.395287777946524,0.321321316421807,3.12268187458191,0.890328018336276,1.30309567482861,2.96946221350564,5.30980553359851,2.18502572539483,1.81394134178851,2.64047111658257,0.590603785761546,1.22974059177571,1.55056975900933,2.18120237686503,3.20847640546249,3.16036757935816,2.10837217149998,6.18813259489121,0,0.900305470156551,0.646793418913773,1.07168517515796,1.41872186913819,2.49716344642899,2.13913726782757,0.913394847343798,0.704015124191131,0.42366414172764,0.661585194164886,1.48397627647332,2.58343082713449,1.32688434841943,2.50681922406587,2.1338316966858,0.874442509889552,0,0.170870880797853,0,0,0,0,0,0,0,0,0,1.58167996790568,3.04979200690273,1.83609079397062,2.29997125615916,2.40198820120795,1.34864346384821,1.90102948168273,1.04702376793612,1.16653475962614,1.24267862617385,0,0.299033092087958,0,0.194451188344048,1.16243841129958,0.506868376472335,0.58678619322877,0.5208175393758,0.524296722128554,0,0.288030006257865,1.26404448251271,3.44632865993279,2.77319584345034,1.68897069871134,1.25318686967237,1.58945083825012,0.841368146639782,1.18151621739662,1.11063094942962,0.838274873204998,1.00826185136841,0.584747284438515,0.577271049841977,0.818138315270983,1.13365191807606,0,0,0,1.54551675225752,0.563047426353546,6.95976172215607,4.50173596066038,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.726511433089237,1.99512436700516,1.36586884603307,1.45864030240976,0.419226325255965,1.83843508450014,3.33370091702423,2.26638562962784,3.20919209591815,1.51618327058278,2.78827229879264,2.26351609663291,2.71560371662659,3.13723246783859,2.75690250986944,2.38146845641537,2.20180219295225,1.54327376370964,3.29668720642645,2.50238164228475,3.42869252385415,2.48466128623072,1.66905332963125,2.90692833264657,1.97629698872194,2.5384382367503,2.74391959309159,3.6829759601298,2.98769050460896,4.48913817326191,2.96587545310435,2.1670986122624,3.6830793885272,2.47898945897546,1.54325288784913,0.999242311751784,1.63752125911786,1.93383948643468,2.86932498103265,1.10295709559758,1.39120701372253 | |||
|short_description=p3@Mid1 | |||
}} |
Revision as of 19:41, 14 September 2013
Short description: | p3@Mid1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Mid1_5end |
Coexpression cluster: | MCL_coexpression_mm9:52 |
Association with transcript: | 7bp_to_NM_010797, uc009uxz.1, uc009uya.1_5end |
EntrezGene: | Mid1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 5.66e-10 | 23 |
circulatory system | 5.66e-10 | 23 |
primary circulatory organ | 2.95e-08 | 18 |
heart | 2.95e-08 | 18 |
primitive heart tube | 2.95e-08 | 18 |
primary heart field | 2.95e-08 | 18 |
anterior lateral plate mesoderm | 2.95e-08 | 18 |
heart tube | 2.95e-08 | 18 |
heart primordium | 2.95e-08 | 18 |
cardiac mesoderm | 2.95e-08 | 18 |
cardiogenic plate | 2.95e-08 | 18 |
heart rudiment | 2.95e-08 | 18 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.