FFCP PHASE1:Mm9::chr16:91647936..91647959,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=66|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:91647936..91647959,-|id=chr16:91647936..91647959,-|ontology_enrichment_celltype=CL:0000144!1.33e-09!121;CL:0000012!1.33e-09!121;CL:0002371!1.53e-08!118;CL:0000063!5.09e-08!66;CL:0000034!9.83e-08!97;CL:0000548!2.48e-07!115;CL:0000004!2.48e-07!115;CL:0000255!2.48e-07!115;CL:0000723!4.91e-07!91;CL:0000048!4.91e-07!91|ontology_enrichment_celltype_v019_2=CL:0000034,1.86e-12,97;CL:0000723,2.33e-11,91;CL:0000048,2.33e-11,91;CL:0002563,2.98e-11,9;CL:0002251,2.98e-11,9;CL:0002320,3.60e-09,46;CL:0000134,3.60e-09,46;CL:0000239,4.66e-08,6;CL:0000677,4.66e-08,6;CL:0000584,4.66e-08,6;CL:0000988,5.47e-08,32;CL:0002032,5.47e-08,32;CL:0000037,5.47e-08,32;CL:0000837,5.47e-08,32;CL:0000219,9.83e-08,54;CL:0000791,2.74e-07,9;CL:0000789,2.74e-07,9;CL:0002420,2.74e-07,9;CL:0002419,2.74e-07,9;CL:0000790,2.74e-07,9;CL:0000223,3.30e-07,20;CL:0000075,9.72e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0003350,2.98e-11,9;UBERON:0004808,2.98e-11,9;UBERON:0001277,2.98e-11,9;UBERON:0002384,3.60e-09,46;UBERON:0000485,9.01e-09,11;UBERON:0001242,4.54e-07,13;UBERON:0001262,4.54e-07,13;UBERON:0004786,4.54e-07,13|phase1_expression=0.640595388419176,2.79180326111489,1.81999695755814,8.16653370528441,6.01074875935617,1.6787927191189,2.10251376535973,7.23090611272827,2.25261955442667,3.27690336850791,0.513653904676515,0.638177271962691,3.25281386869291,6.11942816932982,1.33243904726265,0.809901069559304,0.699561878128147,0.946386496074713,0.548457734422955,0.42438965179803,0.765389611359628,0.992909512008853,0.522399578277871,0.47997726838022,0.91763712426868,2.29692785646008,0.430761996159075,0.861884930743556,0,0.504060259519861,0.665191531965914,3.81018404075779,2.46025915033828,0,4.04392267651784,1.82858109894342,2.24586291888606,7.53356935326434,3.906676722619,4.18818995179039,20.5881020810855,14.3439551841274,5.82612423637384,0.377690453926732,0.506884656097573,0.734187008646726,2.34717403304412,0.872100625521786,0.659058548203415,0.972149495371417,0.279972843250725,0,3.52343472721246,5.07753499407941,3.02484419228218,0.257259436035947,0,0,0.404632921719196,1.05798195854407,1.26766280701236,1.69422266034566,0,0,0,0,0.299600110518405,1.15265491596466,0.622137673850866,0.945041568321835,1.05162480675691,0.285650984403804,1.10434270475807,0.489963196859816,0.670918297127655,0,0,0.383062014255563,0.307213066512487,1.18697658957174,1.09785172322892,0.52091337055676,0.558365998002762,0,0.30559649555362,0,0.142371680799103,0.745597783301202,0,0.453429360640713,9.27566363845369,0,2.03991400112325,0,1.29955283489534,0,0.140444420131752,0.681721290312231,1.55871602761721,1.7666978725517,0.563373679106722,0,0,0,0.865964164044856,0.760079596425296,0.505524445014783,0.22836775943812,0,0.148442139064825,0.867426633830679,0.608930956624282,0.461230994512117,0.301445281105245,0.823120949949934,0.251333182659351,0.247194967734374,0.289198713839823,0,0.161766849947409,0.220841518460394,0,0,1.17112318804619,1.04723353406728,1.02182822083437,1.67741174308288,2.39961092397363,1.27070227073065,0.149790639404823,0,1.38219787324151,0,0,0,0.648965052271031,0.407357455401265,0.124406970610093,0,0.631325567659422,0.780722657776222,0.459804208866946,1.0803727788321,0.753524089178575,0.544291993210623,0.384341160854549,0.562210347358373,0.517406741478031,0.215567992932842,0,0.879755620819744,0.43839146485515,1.11218899690239,1.39300866608867,0.205782136407943,0.398068533636986,0,3.60287069960601,0.568326998791185,0.414251545071004,0,0.540186184383045,0,0,0.154267112887378,0,0,0.233530684734339,0.16455984991348,0.32833492815819,0.243206428637567,0.146199987425332,0.219550115291051,0.268412837520744,0.420579897128254,1.13195073617213,0.330418782983798,0.264450566663544,0.426576501070468,0.232236671860439,0.257734922644187,0,0.444756087689741,0.190225626112559,0,0.164698954724011,0,0.994782360205754,0.19496408711912,0,0,0.199141273254367,0.758671603812327,0.456994050438915,1.1270773567308,0.610953983535943,0.581857461502877,0.210407459670956,0.189709611372772,0,0,0.370191491765402,0.889357881261447,0,0.196558995113203,0.674586337154561,0.811440485554012,0.482354319504834,0.50925170356284,0.287696137450811,0.162135226775035,0.549122826376163,0,0,0,0.252578877947112,0,0.482443521363367,0.923765950833023,0.757965647081939,0,0.678980343100753,0.704070744865506,0.670025029767263,0.714130922658041,0,0.157635144106191,0.8858587585951,0.478364305972461,0.491589944147214,0.172684981865896,0.433947175744535,3.01582567878545,0,0,0,0.321101179975584,0.234423373184406,0,0.252470927204373,0.631016438832513,1.17131623288992,0.861693590931196,1.43381278771531,1.55959071857676,1.13230612315533,1.61924280669958,0.584511715822624,0,0.642642632843614,0.851640511249612,0.35613120733451,0.325773918707152,0.494910368917606,1.32745138339963,0.485561272309963,0.906970670894253,0.37721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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=66 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:91647936..91647959,- | |||
|id=chr16:91647936..91647959,- | |||
|ontology_enrichment_celltype=CL:0000144!1.33e-09!121;CL:0000012!1.33e-09!121;CL:0002371!1.53e-08!118;CL:0000063!5.09e-08!66;CL:0000034!9.83e-08!97;CL:0000548!2.48e-07!115;CL:0000004!2.48e-07!115;CL:0000255!2.48e-07!115;CL:0000723!4.91e-07!91;CL:0000048!4.91e-07!91 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,1.86e-12,97;CL:0000723,2.33e-11,91;CL:0000048,2.33e-11,91;CL:0002563,2.98e-11,9;CL:0002251,2.98e-11,9;CL:0002320,3.60e-09,46;CL:0000134,3.60e-09,46;CL:0000239,4.66e-08,6;CL:0000677,4.66e-08,6;CL:0000584,4.66e-08,6;CL:0000988,5.47e-08,32;CL:0002032,5.47e-08,32;CL:0000037,5.47e-08,32;CL:0000837,5.47e-08,32;CL:0000219,9.83e-08,54;CL:0000791,2.74e-07,9;CL:0000789,2.74e-07,9;CL:0002420,2.74e-07,9;CL:0002419,2.74e-07,9;CL:0000790,2.74e-07,9;CL:0000223,3.30e-07,20;CL:0000075,9.72e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,2.98e-11,9;UBERON:0004808,2.98e-11,9;UBERON:0001277,2.98e-11,9;UBERON:0002384,3.60e-09,46;UBERON:0000485,9.01e-09,11;UBERON:0001242,4.54e-07,13;UBERON:0001262,4.54e-07,13;UBERON:0004786,4.54e-07,13 | |||
|phase1_expression=0.640595388419176,2.79180326111489,1.81999695755814,8.16653370528441,6.01074875935617,1.6787927191189,2.10251376535973,7.23090611272827,2.25261955442667,3.27690336850791,0.513653904676515,0.638177271962691,3.25281386869291,6.11942816932982,1.33243904726265,0.809901069559304,0.699561878128147,0.946386496074713,0.548457734422955,0.42438965179803,0.765389611359628,0.992909512008853,0.522399578277871,0.47997726838022,0.91763712426868,2.29692785646008,0.430761996159075,0.861884930743556,0,0.504060259519861,0.665191531965914,3.81018404075779,2.46025915033828,0,4.04392267651784,1.82858109894342,2.24586291888606,7.53356935326434,3.906676722619,4.18818995179039,20.5881020810855,14.3439551841274,5.82612423637384,0.377690453926732,0.506884656097573,0.734187008646726,2.34717403304412,0.872100625521786,0.659058548203415,0.972149495371417,0.279972843250725,0,3.52343472721246,5.07753499407941,3.02484419228218,0.257259436035947,0,0,0.404632921719196,1.05798195854407,1.26766280701236,1.69422266034566,0,0,0,0,0.299600110518405,1.15265491596466,0.622137673850866,0.945041568321835,1.05162480675691,0.285650984403804,1.10434270475807,0.489963196859816,0.670918297127655,0,0,0.383062014255563,0.307213066512487,1.18697658957174,1.09785172322892,0.52091337055676,0.558365998002762,0,0.30559649555362,0,0.142371680799103,0.745597783301202,0,0.453429360640713,9.27566363845369,0,2.03991400112325,0,1.29955283489534,0,0.140444420131752,0.681721290312231,1.55871602761721,1.7666978725517,0.563373679106722,0,0,0,0.865964164044856,0.760079596425296,0.505524445014783,0.22836775943812,0,0.148442139064825,0.867426633830679,0.608930956624282,0.461230994512117,0.301445281105245,0.823120949949934,0.251333182659351,0.247194967734374,0.289198713839823,0,0.161766849947409,0.220841518460394,0,0,1.17112318804619,1.04723353406728,1.02182822083437,1.67741174308288,2.39961092397363,1.27070227073065,0.149790639404823,0,1.38219787324151,0,0,0,0.648965052271031,0.407357455401265,0.124406970610093,0,0.631325567659422,0.780722657776222,0.459804208866946,1.0803727788321,0.753524089178575,0.544291993210623,0.384341160854549,0.562210347358373,0.517406741478031,0.215567992932842,0,0.879755620819744,0.43839146485515,1.11218899690239,1.39300866608867,0.205782136407943,0.398068533636986,0,3.60287069960601,0.568326998791185,0.414251545071004,0,0.540186184383045,0,0,0.154267112887378,0,0,0.233530684734339,0.16455984991348,0.32833492815819,0.243206428637567,0.146199987425332,0.219550115291051,0.268412837520744,0.420579897128254,1.13195073617213,0.330418782983798,0.264450566663544,0.426576501070468,0.232236671860439,0.257734922644187,0,0.444756087689741,0.190225626112559,0,0.164698954724011,0,0.994782360205754,0.19496408711912,0,0,0.199141273254367,0.758671603812327,0.456994050438915,1.1270773567308,0.610953983535943,0.581857461502877,0.210407459670956,0.189709611372772,0,0,0.370191491765402,0.889357881261447,0,0.196558995113203,0.674586337154561,0.811440485554012,0.482354319504834,0.50925170356284,0.287696137450811,0.162135226775035,0.549122826376163,0,0,0,0.252578877947112,0,0.482443521363367,0.923765950833023,0.757965647081939,0,0.678980343100753,0.704070744865506,0.670025029767263,0.714130922658041,0,0.157635144106191,0.8858587585951,0.478364305972461,0.491589944147214,0.172684981865896,0.433947175744535,3.01582567878545,0,0,0,0.321101179975584,0.234423373184406,0,0.252470927204373,0.631016438832513,1.17131623288992,0.861693590931196,1.43381278771531,1.55959071857676,1.13230612315533,1.61924280669958,0.584511715822624,0,0.642642632843614,0.851640511249612,0.35613120733451,0.325773918707152,0.494910368917606,1.32745138339963,0.485561272309963,0.906970670894253,0.377210159511796,0.885905678642318,0.922305443831782,0,0.727067458955011,0,0.316036757935816,0,0,1.02131881726136,0.900305470156551,1.16422815404479,0.428674070063185,1.59606210278046,0.535106452806212,1.81003922662333,0.608929898229199,0,0.847328283455281,0,0.16488625294148,0.322928853391811,0.482503399425247,0.119372344003136,0.328281799490123,0.582961673259701,0.370850604021019,0.683483523191411,0.82554747185289,0.555583582109135,0.565105371014073,0.410082683163076,0,1.35982743995084,1.95932033253121,1.79659965945751,0,0.632671987162271,1.01659733563424,0.324016022465404,0.209088296014469,0.218362563746178,0.404593039154462,0.0826534557253359,0.26175594198403,0,0,3.38215763210514,0.598066184175915,0,1.16670713006429,1.29159823477731,2.19642963138012,0.938857909166032,0.651021924219751,0.524296722128554,2.65742532908607,3.45636007509439,0.632022241256357,0.608175645870493,0.308132871494482,0.25984164595559,0.358053391334963,0.39736270956253,0.240390899039938,0.147689527174577,0.201932899896295,0.304827226619999,0.604957110821043,0.292373642219257,1.15454209968395,1.40252282617883,0.680191150845634,0.221985953374065,0.897138566094757,0.167884616364078,0.19318959403219,0.187682475451182,0.73260649706906,0,0,0.564751842617067,0.460325236507177,0.572895513439397,0.171853182343688,1.37016503954128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| |||
|short_description=p@chr16:91647936..91647959,- | |||
}} |
Revision as of 13:18, 13 September 2013
Short description: | p@chr16:91647936..91647959, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:91647936..91647959, - |
Coexpression cluster: | MCL_coexpression_mm9:66 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 1.86e-12 | 97 |
somatic stem cell | 2.33e-11 | 91 |
multi fate stem cell | 2.33e-11 | 91 |
intestinal epithelial cell | 2.98e-11 | 9 |
epithelial cell of alimentary canal | 2.98e-11 | 9 |
connective tissue cell | 3.60e-09 | 46 |
mesenchymal cell | 3.60e-09 | 46 |
brush border epithelial cell | 4.66e-08 | 6 |
gut absorptive cell | 4.66e-08 | 6 |
enterocyte | 4.66e-08 | 6 |
hematopoietic cell | 5.47e-08 | 32 |
hematopoietic oligopotent progenitor cell | 5.47e-08 | 32 |
hematopoietic stem cell | 5.47e-08 | 32 |
hematopoietic multipotent progenitor cell | 5.47e-08 | 32 |
motile cell | 9.83e-08 | 54 |
mature alpha-beta T cell | 2.74e-07 | 9 |
alpha-beta T cell | 2.74e-07 | 9 |
immature T cell | 2.74e-07 | 9 |
mature T cell | 2.74e-07 | 9 |
immature alpha-beta T cell | 2.74e-07 | 9 |
endodermal cell | 3.30e-07 | 20 |
columnar/cuboidal epithelial cell | 9.72e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 2.98e-11 | 9 |
gastrointestinal system epithelium | 2.98e-11 | 9 |
intestinal epithelium | 2.98e-11 | 9 |
connective tissue | 3.60e-09 | 46 |
simple columnar epithelium | 9.01e-09 | 11 |
intestinal mucosa | 4.54e-07 | 13 |
wall of intestine | 4.54e-07 | 13 |
gastrointestinal system mucosa | 4.54e-07 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.