FFCP PHASE1:Mm9::chr7:116662653..116662756,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=100502756,100505355,241621,26451,665189,668899|HGNC=|MCL_coexpression_id=1577|UniProt=P14115,G3UZV5|association_with_transcript=0bp_to_ENSMUST00000053298,ENSMUST00000132877,ENSMUST00000143107,ENSMUST00000149143,ENSMUST00000156921,NM_011975,uc009jdr.1_5end|description=CAGE_peak_1_at_Gm13981_5end,CAGE_peak_1_at_Gm14044_5end,CAGE_peak_1_at_Gm19353_5end,CAGE_peak_1_at_Gm7536_5end,CAGE_peak_1_at_LOC100505355_5end,CAGE_peak_1_at_Rpl27a_5end|id=chr7:116662653..116662756,+|ontology_enrichment_celltype=CL:0000144!3.70e-18!121;CL:0000012!3.70e-18!121;CL:0000063!9.84e-18!66;CL:0000548!5.24e-17!115;CL:0000004!5.24e-17!115;CL:0000255!5.24e-17!115;CL:0002371!1.84e-16!118;CL:0000034!3.54e-15!97;CL:0000219!8.30e-15!54;CL:0002320!9.27e-15!46;CL:0000134!9.27e-15!46;CL:0000988!1.01e-12!32;CL:0002032!1.01e-12!32;CL:0000037!1.01e-12!32;CL:0000566!1.01e-12!32;CL:0000837!1.01e-12!32;CL:0000723!3.46e-12!91;CL:0000048!3.46e-12!91;CL:0002031!8.94e-09!25;CL:0000542!2.66e-07!13;CL:0000051!2.66e-07!13;CL:0000838!5.35e-07!12;CL:0000049!8.61e-07!19|ontology_enrichment_celltype_v019_2=CL:0000034,3.54e-15,97;CL:0000219,8.30e-15,54;CL:0002320,9.27e-15,46;CL:0000134,9.27e-15,46;CL:0000988,1.01e-12,32;CL:0002032,1.01e-12,32;CL:0000037,1.01e-12,32;CL:0000837,1.01e-12,32;CL:0000723,3.46e-12,91;CL:0000048,3.46e-12,91;CL:0002031,8.94e-09,25;CL:0000542,2.66e-07,13;CL:0000051,2.66e-07,13;CL:0000838,5.35e-07,12;CL:0000049,8.61e-07,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!9.27e-15!46;UBERON:0002405!3.40e-07!70|ontology_enrichment_uberon_v019_2=UBERON:0002384,9.27e-15,46|phase1_expression=18.5772662641561,7.67745896806594,10.0099832665698,5.74682001482977,9.5170188689806,23.3352187957527,27.3326789496765,24.2751848070163,72.0838257416534,86.3698102128156,63.8643021481134,71.9544874137934,15.2368649638773,22.6418842265203,31.3123176106723,32.598518049762,17.4890469532037,16.7194947639866,18.921791837592,23.7658205006897,12.8415368128115,27.5035934826452,32.388773853228,15.359272588167,19.0409703285751,12.0588712464154,21.5380998079537,23.270893130076,14.0617330397717,16.3819584343955,39.0245698753336,78.7438035089943,96.5651716507775,15.8481681015439,38.7061170466708,34.7430408799249,37.3629921960135,11.3003540298965,16.4080422349998,8.37637990358077,9.41170380849623,7.5135003345429,8.25367600152961,15.1076181570693,12.9762471960979,12.4811791469943,15.6478268869608,20.494364699762,12.0827400503959,13.8045228342741,24.2176509411877,5.75010257459886,35.7376950902978,29.7398478224651,29.9123481236793,18.7799388306241,12.8940047972441,11.8604581223812,11.1274053472779,15.340738398889,13.3104594736298,25.0744953731158,23.1216646988896,24.7472422252385,12.8552627133707,17.7620028736525,15.2796056364386,11.5265491596466,10.3689612308478,17.2807601064564,13.6711224878398,15.7108041422092,20.3199057675484,14.4539143073646,16.9646483702278,11.9498442259303,14.3150645299205,11.2364857514965,12.1349161272432,11.3422207447967,17.9315781460723,20.3156214517136,15.9134309430787,14.6318278608237,12.3766580699216,13.5529149317887,13.810053037513,13.4207600994216,36.5757513799279,17.0036010240267,10.4351215932604,31.8356834483113,65.9572193696518,18.3499085156858,14.9448576012964,16.5769948226014,7.72444310724635,10.9075406449957,22.0818103912438,20.1403557470894,18.8730182500752,15.3991772897181,22.9324715735981,21.3320010945999,55.8546885808932,52.6988520188205,58.1353111767001,7.07940054258172,5.69663344023778,9.64873903921361,30.5334175108399,24.0527727866592,15.4512383161559,15.6751546174727,10.5829836422134,6.53466274914312,9.64060374164058,5.49477556295664,7.07688441559899,8.7354098971601,10.1587098491781,12.6067565815158,9.31958806090611,5.27005434620785,5.86450779077674,6.64188343542338,44.0919658181787,98.9839506139123,46.3806328816686,7.63932260964596,6.8625090422794,11.8115090986093,8.16974304903699,6.39288643325826,11.8439185398949,7.94982189032012,12.0170449343373,7.71323217782577,9.35074206204597,3.99839526184301,17.0457780281142,24.3696230699481,11.1638520479317,13.8648432408858,8.64063539221864,10.3772113430728,11.2442069471675,6.20888089773638,23.4969112296798,16.0740168142646,13.900138808952,19.5084201860542,14.1804097105055,12.537077994798,11.5237996388448,21.6947350832158,61.7947604835647,55.8444958438932,37.2254184208226,15.5344329401626,15.4787199587523,14.4049649168812,10.6535131013345,9.64144735562279,9.10175966035532,10.9290954032692,6.9751084363901,7.58974725386602,6.41783414662574,7.71587081171748,3.89130285820108,6.14039947186396,6.36695334344047,4.69722465661301,6.9395683026162,8.02655976558419,0.991256348951394,12.4291766331866,22.6085545567348,19.9723537799977,17.1393723558384,10.4875432804138,12.4531704553127,10.6526350623033,5.69434873853414,8.07024878147653,6.53471542880701,6.56556357735798,7.21367122340745,8.98819408654222,6.26800344636613,5.77509692437665,29.5881925486807,18.3940105301663,13.5249282807697,12.6263823264095,13.9645790760691,8.416298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| ||
|EntrezGene=100502756,100505355,241621,26451,665189,668899 | |||
|HGNC= | |||
|MCL_coexpression_id=1577 | |||
|UniProt=P14115,G3UZV5 | |||
|association_with_transcript=0bp_to_ENSMUST00000053298,ENSMUST00000132877,ENSMUST00000143107,ENSMUST00000149143,ENSMUST00000156921,NM_011975,uc009jdr.1_5end | |||
|description=CAGE_peak_1_at_Gm13981_5end,CAGE_peak_1_at_Gm14044_5end,CAGE_peak_1_at_Gm19353_5end,CAGE_peak_1_at_Gm7536_5end,CAGE_peak_1_at_LOC100505355_5end,CAGE_peak_1_at_Rpl27a_5end | |||
|id=chr7:116662653..116662756,+ | |||
|ontology_enrichment_celltype=CL:0000144!3.70e-18!121;CL:0000012!3.70e-18!121;CL:0000063!9.84e-18!66;CL:0000548!5.24e-17!115;CL:0000004!5.24e-17!115;CL:0000255!5.24e-17!115;CL:0002371!1.84e-16!118;CL:0000034!3.54e-15!97;CL:0000219!8.30e-15!54;CL:0002320!9.27e-15!46;CL:0000134!9.27e-15!46;CL:0000988!1.01e-12!32;CL:0002032!1.01e-12!32;CL:0000037!1.01e-12!32;CL:0000566!1.01e-12!32;CL:0000837!1.01e-12!32;CL:0000723!3.46e-12!91;CL:0000048!3.46e-12!91;CL:0002031!8.94e-09!25;CL:0000542!2.66e-07!13;CL:0000051!2.66e-07!13;CL:0000838!5.35e-07!12;CL:0000049!8.61e-07!19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000034,3.54e-15,97;CL:0000219,8.30e-15,54;CL:0002320,9.27e-15,46;CL:0000134,9.27e-15,46;CL:0000988,1.01e-12,32;CL:0002032,1.01e-12,32;CL:0000037,1.01e-12,32;CL:0000837,1.01e-12,32;CL:0000723,3.46e-12,91;CL:0000048,3.46e-12,91;CL:0002031,8.94e-09,25;CL:0000542,2.66e-07,13;CL:0000051,2.66e-07,13;CL:0000838,5.35e-07,12;CL:0000049,8.61e-07,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!9.27e-15!46;UBERON:0002405!3.40e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,9.27e-15,46 | |||
|phase1_expression=18.5772662641561,7.67745896806594,10.0099832665698,5.74682001482977,9.5170188689806,23.3352187957527,27.3326789496765,24.2751848070163,72.0838257416534,86.3698102128156,63.8643021481134,71.9544874137934,15.2368649638773,22.6418842265203,31.3123176106723,32.598518049762,17.4890469532037,16.7194947639866,18.921791837592,23.7658205006897,12.8415368128115,27.5035934826452,32.388773853228,15.359272588167,19.0409703285751,12.0588712464154,21.5380998079537,23.270893130076,14.0617330397717,16.3819584343955,39.0245698753336,78.7438035089943,96.5651716507775,15.8481681015439,38.7061170466708,34.7430408799249,37.3629921960135,11.3003540298965,16.4080422349998,8.37637990358077,9.41170380849623,7.5135003345429,8.25367600152961,15.1076181570693,12.9762471960979,12.4811791469943,15.6478268869608,20.494364699762,12.0827400503959,13.8045228342741,24.2176509411877,5.75010257459886,35.7376950902978,29.7398478224651,29.9123481236793,18.7799388306241,12.8940047972441,11.8604581223812,11.1274053472779,15.340738398889,13.3104594736298,25.0744953731158,23.1216646988896,24.7472422252385,12.8552627133707,17.7620028736525,15.2796056364386,11.5265491596466,10.3689612308478,17.2807601064564,13.6711224878398,15.7108041422092,20.3199057675484,14.4539143073646,16.9646483702278,11.9498442259303,14.3150645299205,11.2364857514965,12.1349161272432,11.3422207447967,17.9315781460723,20.3156214517136,15.9134309430787,14.6318278608237,12.3766580699216,13.5529149317887,13.810053037513,13.4207600994216,36.5757513799279,17.0036010240267,10.4351215932604,31.8356834483113,65.9572193696518,18.3499085156858,14.9448576012964,16.5769948226014,7.72444310724635,10.9075406449957,22.0818103912438,20.1403557470894,18.8730182500752,15.3991772897181,22.9324715735981,21.3320010945999,55.8546885808932,52.6988520188205,58.1353111767001,7.07940054258172,5.69663344023778,9.64873903921361,30.5334175108399,24.0527727866592,15.4512383161559,15.6751546174727,10.5829836422134,6.53466274914312,9.64060374164058,5.49477556295664,7.07688441559899,8.7354098971601,10.1587098491781,12.6067565815158,9.31958806090611,5.27005434620785,5.86450779077674,6.64188343542338,44.0919658181787,98.9839506139123,46.3806328816686,7.63932260964596,6.8625090422794,11.8115090986093,8.16974304903699,6.39288643325826,11.8439185398949,7.94982189032012,12.0170449343373,7.71323217782577,9.35074206204597,3.99839526184301,17.0457780281142,24.3696230699481,11.1638520479317,13.8648432408858,8.64063539221864,10.3772113430728,11.2442069471675,6.20888089773638,23.4969112296798,16.0740168142646,13.900138808952,19.5084201860542,14.1804097105055,12.537077994798,11.5237996388448,21.6947350832158,61.7947604835647,55.8444958438932,37.2254184208226,15.5344329401626,15.4787199587523,14.4049649168812,10.6535131013345,9.64144735562279,9.10175966035532,10.9290954032692,6.9751084363901,7.58974725386602,6.41783414662574,7.71587081171748,3.89130285820108,6.14039947186396,6.36695334344047,4.69722465661301,6.9395683026162,8.02655976558419,0.991256348951394,12.4291766331866,22.6085545567348,19.9723537799977,17.1393723558384,10.4875432804138,12.4531704553127,10.6526350623033,5.69434873853414,8.07024878147653,6.53471542880701,6.56556357735798,7.21367122340745,8.98819408654222,6.26800344636613,5.77509692437665,29.5881925486807,18.3940105301663,13.5249282807697,12.6263823264095,13.9645790760691,8.41629838683823,6.19718063817721,4.72352473534727,5.96595165797224,5.18268088471562,8.59712618552732,22.6909343773888,27.9113773060748,31.0309715091098,17.6488305607998,17.1235783424216,16.8053062175737,15.247895284893,15.0785760900783,22.5140358814227,11.5014565221884,9.67566463938109,10.6092808858951,10.1031551178845,12.9166137735777,7.71909634181387,4.80358294433172,28.2342203538022,15.9705676913185,21.7273709792241,17.8364588699262,10.3853879613926,7.14130922658041,8.39074685788535,7.25121662888479,8.63712289630222,5.89982644032702,9.34020893879707,6.38934432903814,5.64131328467895,10.5553898757491,14.6854534631052,12.7858710984949,10.4855963595798,8.34863067936518,9.61135830056066,17.0492343191742,6.81671503451807,13.8823616543153,14.055794794679,9.47862950024315,16.7278158566786,10.0259403337077,7.92614286208731,9.71545684019746,12.2747460322751,11.4633455604492,7.06906896127976,6.52924391958036,14.4233138970477,12.3794089108718,10.0631775013247,9.2921596837974,28.1625537939778,38.0927681775586,29.2337873621642,22.147641966058,14.7568871013085,12.6629863652428,14.9048829085777,10.3384239731569,19.2782422340848,15.8127912862498,10.3135543248187,11.9153862013826,17.1058039329745,18.8863678322822,13.0745591369271,13.1231772895282,13.5560301377574,10.86023535974,12.178597964584,12.9069439435041,7.20229040936989,8.82113592219848,9.23363016472288,10.333723308538,8.86599996443891,12.2953514323231,11.3257220824092,9.03590593552537,8.34413859047294,13.8405413446261,14.2406938894624,21.4825651748866,15.4462134743847,16.403307326523,21.2763701082066,40.7948231985253,37.5069892227403,40.2161923770873,11.4560474161814,21.0363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| |||
|short_description=p1@Gm13981,p1@Gm14044,p1@Gm19353,p1@Gm7536,p1@LOC100505355,p1@Rpl27a | |||
}} |
Revision as of 11:26, 14 September 2013
Short description: | p1@Gm13981, p1@Gm14044, p1@Gm19353, p1@Gm7536, p1@LOC100505355, p1@Rpl27a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm13981_5end, CAGE_peak_1_at_Gm14044_5end, CAGE_peak_1_at_Gm19353_5end, CAGE_peak_1_at_Gm7536_5end, CAGE_peak_1_at_LOC100505355_5end, CAGE_peak_1_at_Rpl27a_5end |
Coexpression cluster: | MCL_coexpression_mm9:1577 |
Association with transcript: | 0bp_to_ENSMUST00000053298, ENSMUST00000132877, ENSMUST00000143107, ENSMUST00000149143, ENSMUST00000156921, NM_011975, uc009jdr.1_5end |
EntrezGene: | 100502756,100505355,241621,26451,665189,668899 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 3.54e-15 | 97 |
motile cell | 8.30e-15 | 54 |
connective tissue cell | 9.27e-15 | 46 |
mesenchymal cell | 9.27e-15 | 46 |
hematopoietic cell | 1.01e-12 | 32 |
hematopoietic oligopotent progenitor cell | 1.01e-12 | 32 |
hematopoietic stem cell | 1.01e-12 | 32 |
hematopoietic multipotent progenitor cell | 1.01e-12 | 32 |
somatic stem cell | 3.46e-12 | 91 |
multi fate stem cell | 3.46e-12 | 91 |
hematopoietic lineage restricted progenitor cell | 8.94e-09 | 25 |
lymphocyte | 2.66e-07 | 13 |
common lymphoid progenitor | 2.66e-07 | 13 |
lymphoid lineage restricted progenitor cell | 5.35e-07 | 12 |
common myeloid progenitor | 8.61e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 9.27e-15 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.