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FFCP PHASE1:Mm9::chr10:121484321..121484345,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=117600|HGNC=|UniProt=Q91Z69|association_with_transcript=18bp_to_ENSMUST00000020322_5end|description=CAGE_peak_3_at_Srgap1_5end|id=chr10:121484321..121484345,-|ontology_enrichment_celltype=CL:0000540!1.85e-10!33;CL:0000047!1.85e-10!33;CL:0000031!1.85e-10!33;CL:0000404!1.85e-10!33;CL:0000393!3.96e-10!39;CL:0000211!3.96e-10!39;CL:0000117!1.45e-09!23;CL:0000337!1.45e-09!23;CL:0000221!1.48e-09!44;CL:0000133!1.48e-09!44;CL:0002319!5.39e-09!43;CL:0000055!2.43e-08!50|ontology_enrichment_celltype_v019_2=CL:0000540,2.08e-11,33;CL:0000047,2.08e-11,33;CL:0000031,2.08e-11,33;CL:0000404,2.08e-11,33;CL:0000393,5.87e-11,39;CL:0000211,5.87e-11,39;CL:0000117,7.52e-11,23;CL:0000337,7.52e-11,23;CL:0000221,2.91e-09,44;CL:0000133,2.91e-09,44;CL:0002319,1.18e-08,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!7.48e-11!75;UBERON:0001016!7.48e-11!75;UBERON:0004121!2.68e-10!102;UBERON:0000924!2.68e-10!102;UBERON:0006601!2.68e-10!102;UBERON:0001017!2.82e-10!73;UBERON:0005743!2.82e-10!73;UBERON:0000468!4.88e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.22e-10,75;UBERON:0004121,6.83e-10,95;UBERON:0000924,6.83e-10,95;UBERON:0006601,6.83e-10,95;UBERON:0001017,9.35e-10,73;UBERON:0000073,9.94e-07,54|phase1_expression=3.52327463630547,0.348975407639361,1.36499771816861,0,0,2.35030980676646,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0.95995453676044,0.91763712426868,0.57423196411502,1.7230479846363,1.07735616342945,0.380046838912748,0,1.10865255327652,0,0,0,0,0,0,0,0,0,0,0,0,1.1330713617802,1.4192770370732,2.9367480345869,0,0.436050312760893,0.878744730937887,0.58328969722285,0.839918529752175,1.43752564364972,0,0,0,2.31533492432352,0.85960031981627,0,2.02316460859598,2.64495489636016,4.43681982454325,0.338844532069132,2.66788438833342,0,0,0,0.898800331555214,1.53687322128622,1.03689612308478,2.16009501330705,1.47227472945967,1.71390590642282,3.3130281142742,1.83736198822431,2.01275489138296,3.67687514644008,2.20231761998777,3.31987079021488,4.30098293117482,1.97829431595291,4.57438218012048,3.64639359389732,4.18774498502071,5.6276261003168,3.97275444219706,1.47314292736834,2.56269025438385,1.86399445825301,3.93776205332557,1.43585964202892,1.73918693221007,0,0,0,0,0,0.280888840263504,0,0.519572009205738,0,5.35204995151386,0,0,0,0.432982082022428,0.253359865475099,0,0.68510327831436,0,0,1.38788261412909,0.608930956624282,0.461230994512117,0.452167921657868,0.823120949949934,0.125666591329675,1.23597483867187,0.433798070759735,1.76922110389975,3.07357014900077,2.20841518460394,1.93950101254089,0,5.85561594023094,3.14170060220183,0.510914110417183,0,0,0,3.59497534571574,7.77751024791665,2.76439574648302,1.04294592115366,0.255715457330331,4.1557608911912,2.92034273521964,0.407357455401265,0.995255764880744,0.252722758433675,0.841767423545896,1.30120442962704,0.689706313300419,1.62055916824814,1.50704817835715,1.63287597963187,1.15302348256365,0.937017245597288,0.517406741478031,0.862271971731369,1.70195472151037,1.05570674498369,1.31517439456545,0.834141747676794,2.78601733217733,1.64625709126355,0.995171334092466,0,0,0,0.414251545071004,0.938104239924385,1.2604344302271,2.13070262026689,1.77087808572663,1.54267112887378,1.86027155800326,1.07309360559848,1.16765342367169,0.987359099480883,0.656669856316381,0.162137619091711,0.877199924551994,0,0,1.68231958851302,1.13195073617213,0,0.264450566663544,0.426576501070468,2.55460339046482,1.67527699718721,1.00841762311671,0.22237804384487,0.570676878337677,0.949058123089023,0.658795818896044,1.00534083520108,0.596869416123452,1.16978452271472,0.898819408654221,1.29682829924817,1.1948476395262,2.0863469104839,2.85621281524322,4.50830942692322,5.09128319613286,5.81857461502877,4.20814919341911,4.93244989569207,2.21415221969403,2.35498091762062,2.34454611451421,0.592905254174298,0.166845105716094,0.393117990226406,0.224862112384854,0.405720242777006,0.241177159752417,0.25462585178142,0.287696137450811,0,0.274561413188081,2.87536413054709,0.372140947668503,0,0,0,0,0.923765950833023,1.13694847062291,1.62964976442026,1.86719594352707,0.938760993154008,1.00503754465089,0.476087281772027,1.75620283072019,4.09851374676097,3.10050565508285,3.34855014180723,1.14704320301017,0.518054945597687,1.01254341007058,0,0,0.983528546038072,1.37968373152366,4.65596710964597,3.6335622843583,0,0.757412781613119,1.26203287766503,0.390438744296638,0.646270193198397,2.38968797952552,2.22798674082394,1.98153571552183,1.61924280669958,2.63030272120181,1.18586333383957,4.4984984299053,1.41940085208269,1.06839362200353,0.81443479676788,0.659880491890142,0,1.45668381692989,0,0,1.18120757152309,0.922305443831782,0.775284879504663,1.81766864738753,0,0.316036757935816,0,0,1.02131881726136,0.900305470156551,0.646793418913773,1.28602221018955,2.12808280370728,2.49716344642899,1.15184314421485,0.913394847343798,1.40803024838226,2.75381692122966,0.441056796109924,3.62749756471256,2.09903754704677,1.44751019827574,1.55184047204077,0.984845398470368,0.582961673259701,5.19190845629427,0.341741761595705,0.619160603889667,1.85194527369712,0.753473828018764,0.136694227721025,0.228778173206523,0,0.139951452323658,0,0,0.158167996790568,1.01659733563424,1.18805874903981,2.50905955217362,1.31017538247707,2.29269388854195,1.65306911450672,1.57053565190418,0.518459893167171,0.621339313086926,0,1.64468200648377,0.66183396182839,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0,0,0,0.288030006257865,0.316011120628178,0.202725215290164,0.616265742988964,0.129920822977795,0.179026695667481,0.198681354781265,0.360586348559907,0.147689527174577,0.403865799792591,0,0,0.0974578807397524,0,0.233753804363138,0,0,0.0897138566094757,0,1.9318959403219,0.93841237725591,1.64836461840539,0.643105137237198,0,0,1.84130094602871,0.572895513439397,0.343706364687375,0,0.755393897389701,0.675022500231806,0,0,0,1.24544817101012,1.59609949360412,1.19513524027894,1.21553358534147,2.30574478890781,1.10306105070008,1.77797382241292,2.67845574410562,1.92551525755089,4.04315538822076,2.78827229879264,1.88626341386076,1.31098110457835,1.53660365771686,2.06767688240208,2.38146845641537,2.31768651889711,2.31491064556446,2.06042950401653,2.79677948255355,3.42869252385415,2.48466128623072,2.86123427936785,2.47088908274958,1.59985946706062,2.45382362885862,0.914639864363863,2.10455769150274,2.30866993537965,1.68342681497322,1.66089025373844,1.47756723563345,1.63692417267876,2.32405261778949,1.35034627686799,1.74867404556562,0.935726433781634,2.36358159453128,1.72159498861959,1.54413993383661,2.08681052058379|short_description=p3@Srgap1}}
|EntrezGene=117600
|HGNC=
|UniProt=Q91Z69
|association_with_transcript=18bp_to_ENSMUST00000020322_5end
|description=CAGE_peak_3_at_Srgap1_5end
|id=chr10:121484321..121484345,-
|ontology_enrichment_celltype=CL:0000540!1.85e-10!33;CL:0000047!1.85e-10!33;CL:0000031!1.85e-10!33;CL:0000404!1.85e-10!33;CL:0000393!3.96e-10!39;CL:0000211!3.96e-10!39;CL:0000117!1.45e-09!23;CL:0000337!1.45e-09!23;CL:0000221!1.48e-09!44;CL:0000133!1.48e-09!44;CL:0002319!5.39e-09!43;CL:0000055!2.43e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000540,2.08e-11,33;CL:0000047,2.08e-11,33;CL:0000031,2.08e-11,33;CL:0000404,2.08e-11,33;CL:0000393,5.87e-11,39;CL:0000211,5.87e-11,39;CL:0000117,7.52e-11,23;CL:0000337,7.52e-11,23;CL:0000221,2.91e-09,44;CL:0000133,2.91e-09,44;CL:0002319,1.18e-08,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!7.48e-11!75;UBERON:0001016!7.48e-11!75;UBERON:0004121!2.68e-10!102;UBERON:0000924!2.68e-10!102;UBERON:0006601!2.68e-10!102;UBERON:0001017!2.82e-10!73;UBERON:0005743!2.82e-10!73;UBERON:0000468!4.88e-07!333
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.22e-10,75;UBERON:0004121,6.83e-10,95;UBERON:0000924,6.83e-10,95;UBERON:0006601,6.83e-10,95;UBERON:0001017,9.35e-10,73;UBERON:0000073,9.94e-07,54
|phase1_expression=3.52327463630547,0.348975407639361,1.36499771816861,0,0,2.35030980676646,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0.95995453676044,0.91763712426868,0.57423196411502,1.7230479846363,1.07735616342945,0.380046838912748,0,1.10865255327652,0,0,0,0,0,0,0,0,0,0,0,0,1.1330713617802,1.4192770370732,2.9367480345869,0,0.436050312760893,0.878744730937887,0.58328969722285,0.839918529752175,1.43752564364972,0,0,0,2.31533492432352,0.85960031981627,0,2.02316460859598,2.64495489636016,4.43681982454325,0.338844532069132,2.66788438833342,0,0,0,0.898800331555214,1.53687322128622,1.03689612308478,2.16009501330705,1.47227472945967,1.71390590642282,3.3130281142742,1.83736198822431,2.01275489138296,3.67687514644008,2.20231761998777,3.31987079021488,4.30098293117482,1.97829431595291,4.57438218012048,3.64639359389732,4.18774498502071,5.6276261003168,3.97275444219706,1.47314292736834,2.56269025438385,1.86399445825301,3.93776205332557,1.43585964202892,1.73918693221007,0,0,0,0,0,0.280888840263504,0,0.519572009205738,0,5.35204995151386,0,0,0,0.432982082022428,0.253359865475099,0,0.68510327831436,0,0,1.38788261412909,0.608930956624282,0.461230994512117,0.452167921657868,0.823120949949934,0.125666591329675,1.23597483867187,0.433798070759735,1.76922110389975,3.07357014900077,2.20841518460394,1.93950101254089,0,5.85561594023094,3.14170060220183,0.510914110417183,0,0,0,3.59497534571574,7.77751024791665,2.76439574648302,1.04294592115366,0.255715457330331,4.1557608911912,2.92034273521964,0.407357455401265,0.995255764880744,0.252722758433675,0.841767423545896,1.30120442962704,0.689706313300419,1.62055916824814,1.50704817835715,1.63287597963187,1.15302348256365,0.937017245597288,0.517406741478031,0.862271971731369,1.70195472151037,1.05570674498369,1.31517439456545,0.834141747676794,2.78601733217733,1.64625709126355,0.995171334092466,0,0,0,0.414251545071004,0.938104239924385,1.2604344302271,2.13070262026689,1.77087808572663,1.54267112887378,1.86027155800326,1.07309360559848,1.16765342367169,0.987359099480883,0.656669856316381,0.162137619091711,0.877199924551994,0,0,1.68231958851302,1.13195073617213,0,0.264450566663544,0.426576501070468,2.55460339046482,1.67527699718721,1.00841762311671,0.22237804384487,0.570676878337677,0.949058123089023,0.658795818896044,1.00534083520108,0.596869416123452,1.16978452271472,0.898819408654221,1.29682829924817,1.1948476395262,2.0863469104839,2.85621281524322,4.50830942692322,5.09128319613286,5.81857461502877,4.20814919341911,4.93244989569207,2.21415221969403,2.35498091762062,2.34454611451421,0.592905254174298,0.166845105716094,0.393117990226406,0.224862112384854,0.405720242777006,0.241177159752417,0.25462585178142,0.287696137450811,0,0.274561413188081,2.87536413054709,0.372140947668503,0,0,0,0,0.923765950833023,1.13694847062291,1.62964976442026,1.86719594352707,0.938760993154008,1.00503754465089,0.476087281772027,1.75620283072019,4.09851374676097,3.10050565508285,3.34855014180723,1.14704320301017,0.518054945597687,1.01254341007058,0,0,0.983528546038072,1.37968373152366,4.65596710964597,3.6335622843583,0,0.757412781613119,1.26203287766503,0.390438744296638,0.646270193198397,2.38968797952552,2.22798674082394,1.98153571552183,1.61924280669958,2.63030272120181,1.18586333383957,4.4984984299053,1.41940085208269,1.06839362200353,0.81443479676788,0.659880491890142,0,1.45668381692989,0,0,1.18120757152309,0.922305443831782,0.775284879504663,1.81766864738753,0,0.316036757935816,0,0,1.02131881726136,0.900305470156551,0.646793418913773,1.28602221018955,2.12808280370728,2.49716344642899,1.15184314421485,0.913394847343798,1.40803024838226,2.75381692122966,0.441056796109924,3.62749756471256,2.09903754704677,1.44751019827574,1.55184047204077,0.984845398470368,0.582961673259701,5.19190845629427,0.341741761595705,0.619160603889667,1.85194527369712,0.753473828018764,0.136694227721025,0.228778173206523,0,0.139951452323658,0,0,0.158167996790568,1.01659733563424,1.18805874903981,2.50905955217362,1.31017538247707,2.29269388854195,1.65306911450672,1.57053565190418,0.518459893167171,0.621339313086926,0,1.64468200648377,0.66183396182839,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0,0,0,0.288030006257865,0.316011120628178,0.202725215290164,0.616265742988964,0.129920822977795,0.179026695667481,0.198681354781265,0.360586348559907,0.147689527174577,0.403865799792591,0,0,0.0974578807397524,0,0.233753804363138,0,0,0.0897138566094757,0,1.9318959403219,0.93841237725591,1.64836461840539,0.643105137237198,0,0,1.84130094602871,0.572895513439397,0.343706364687375,0,0.755393897389701,0.675022500231806,0,0,0,1.24544817101012,1.59609949360412,1.19513524027894,1.21553358534147,2.30574478890781,1.10306105070008,1.77797382241292,2.67845574410562,1.92551525755089,4.04315538822076,2.78827229879264,1.88626341386076,1.31098110457835,1.53660365771686,2.06767688240208,2.38146845641537,2.31768651889711,2.31491064556446,2.06042950401653,2.79677948255355,3.42869252385415,2.48466128623072,2.86123427936785,2.47088908274958,1.59985946706062,2.45382362885862,0.914639864363863,2.10455769150274,2.30866993537965,1.68342681497322,1.66089025373844,1.47756723563345,1.63692417267876,2.32405261778949,1.35034627686799,1.74867404556562,0.935726433781634,2.36358159453128,1.72159498861959,1.54413993383661,2.08681052058379
|short_description=p3@Srgap1
}}

Revision as of 15:55, 12 September 2013

Short description:p3@Srgap1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Srgap1_5end
Coexpression cluster:NA
Association with transcript: 18bp_to_ENSMUST00000020322_5end
EntrezGene:Srgap1
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p3@Srgap1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.52
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.35
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.96
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I21.08
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.42
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.94
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.32
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C32.02
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C74.44
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.16
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.31
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.84
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.01
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.32
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.98
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.57
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.19
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.63
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.97
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.47
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D93.94
Mouse Schwann, donor2.CNhs12573.11746-123F91.44
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.74
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.35
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.69
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C51.39
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F53.07
bone (os femoris), neonate N16.CNhs11225.1525-43A62.21
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B25.86
cerebellum, neonate N30.CNhs11135.1395-42I23.14
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A43.59
corpus striatum, adult.CNhs10487.19-21D87.78
corpus striatum, neonate N00.CNhs11226.630-43F12.76
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F24.16
diencephalon, neonate N30.CNhs11201.1388-42B22.92
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C61.30
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C61.63
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C42.79
forelimb, embryo E18.CNhs11008.1520-43B51.65
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D42.13
heart, embryo E15.CNhs11017.431-16C81.77
heart, embryo E16.CNhs11021.457-17C61.54
heart, embryo E17.CNhs11025.479-18E51.86
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E31.17
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E81.68
hippocampus, neonate N00.CNhs11228.627-43G11.13
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D52.55
intestine, embryo E15.CNhs10602.976-16D81.68
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A51.17
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G11.19
kidney, embryo E14.CNhs10606.411-4I92.09
kidney, embryo E15.CNhs10997.434-16F82.86
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I25.09
kidney, embryo E18.CNhs11001.1288-20C75.82
kidney, neonate N00.CNhs11214.646-21G74.21
kidney, neonate N10.CNhs11206.758-6D54.93
kidney, neonate N20.CNhs11113.832-19I12.21
kidney, neonate N25.CNhs11122.1353-25F32.35
kidney, neonate N30.CNhs11203.1385-42H12.34
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G21.14
lung, embryo E14.CNhs10604.404-26F81.63
lung, embryo E15.CNhs11020.432-17C51.87
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A61.01
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C61.76
lung, neonate N06.CNhs11212.683-20E54.10
lung, neonate N07.CNhs11111.715-19A33.10
lung, neonate N10.CNhs11219.750-23E63.35
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H21.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C24.66
medulla oblongata, neonate N30.CNhs11200.1396-42A33.63
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.39
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.63
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I94.50
ovary, adult.CNhs10507.91-2I71.42
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B92.13
pituitary gland, embryo E16.CNhs11036.449-43F62.50
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G32.75
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C33.63
skin, neonate N00.CNhs11124.650-25G42.10
skin, neonate N03.CNhs11215.662-22H31.45
skin, neonate N06.CNhs11097.693-20I51.55
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C95.19
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F21.85
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D41.19
stomach, embryo E17.CNhs11006.1035-18D52.51
stomach, embryo E18.CNhs10999.1286-20C61.31
stomach, neonate N03.CNhs11193.1340-24B82.29
stomach, neonate N07.CNhs11210.718-18A91.65
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.64
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.93
uterus, adult pregnant day19.CNhs10497.590-15F50.94
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I81.25
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D21.22
whole body, embryo E14.CNhs10519.395-14B12.31
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.68
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.04
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.07
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.32
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.80
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.48
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.66
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.48
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.32
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C61.72
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron2.08e-1133
neuronal stem cell2.08e-1133
neuroblast2.08e-1133
electrically signaling cell2.08e-1133
electrically responsive cell5.87e-1139
electrically active cell5.87e-1139
CNS neuron (sensu Vertebrata)7.52e-1123
neuroblast (sensu Vertebrata)7.52e-1123
ectodermal cell2.91e-0944
neurectodermal cell2.91e-0944
neural cell1.18e-0843

Uber anatomy
Ontology termp-valuen
nervous system2.22e-1075
ectoderm-derived structure6.83e-1095
ectoderm6.83e-1095
presumptive ectoderm6.83e-1095
central nervous system9.35e-1073
regional part of nervous system9.94e-0754







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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