FFCP PHASE1:Mm9::chr19:44060891..44060902,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=93721|HGNC=|MCL_coexpression_id=3197|UniProt=Q9JJN5|association_with_transcript=107bp_to_NM_030703,uc008hpa.1_5end|description=CAGE_peak_2_at_Cpn1_5end|id=chr19:44060891..44060902,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,1.81e-07,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005177!5.54e-20!85;UBERON:0005172!1.62e-18!49;UBERON:0005173!1.62e-18!49;UBERON:0002417!1.62e-18!49;UBERON:0000916!1.62e-18!49;UBERON:0009569!3.89e-17!66;UBERON:0002107!5.15e-17!22;UBERON:0007499!5.15e-17!22;UBERON:0006925!5.15e-17!22;UBERON:0009497!5.15e-17!22;UBERON:0000015!5.15e-17!22;UBERON:0002423!5.15e-17!22;UBERON:0006235!5.15e-17!22;UBERON:0008835!5.15e-17!22;UBERON:0003894!5.15e-17!22;UBERON:0004161!5.15e-17!22;UBERON:0008836!5.15e-17!22;UBERON:0009854!8.65e-16!23;UBERON:0009856!8.65e-16!23;UBERON:0000466!2.64e-15!79;UBERON:0002100!5.20e-14!98;UBERON:0002365!1.18e-13!25;UBERON:0002330!1.18e-13!25;UBERON:0001007!2.81e-13!128;UBERON:0001555!2.81e-13!128;UBERON:0007026!2.81e-13!128;UBERON:0004119!3.75e-13!130;UBERON:0000925!3.75e-13!130;UBERON:0006595!3.75e-13!130;UBERON:0004921!7.28e-13!126;UBERON:0004185!7.28e-13!126;UBERON:0003104!3.44e-11!131;UBERON:0009142!3.44e-11!131;UBERON:0005409!1.01e-10!59;UBERON:0001041!1.71e-10!92;UBERON:0000077!2.11e-09!97;UBERON:0002113!1.69e-08!14;UBERON:0003918!1.69e-08!14;UBERON:0005095!1.69e-08!14;UBERON:0007687!1.69e-08!14;UBERON:0000160!5.05e-08!43;UBERON:0001264!8.43e-08!12;UBERON:0003922!8.43e-08!12;UBERON:0002114!8.43e-08!12;UBERON:0003923!8.43e-08!12;UBERON:0003924!8.43e-08!12;UBERON:0003921!8.43e-08!12;UBERON:0005256!1.65e-07!47;UBERON:0002108!2.45e-07!16;UBERON:0003914!4.77e-07!47;UBERON:0001045!7.60e-07!13;UBERON:0006554!9.11e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0005172,3.82e-27,49;UBERON:0005173,3.82e-27,49;UBERON:0002417,3.82e-27,49;UBERON:0000916,3.82e-27,49;UBERON:0002107,1.48e-25,22;UBERON:0007499,1.48e-25,22;UBERON:0006925,1.48e-25,22;UBERON:0009497,1.48e-25,22;UBERON:0000015,1.48e-25,22;UBERON:0002423,1.48e-25,22;UBERON:0006235,1.48e-25,22;UBERON:0008835,1.48e-25,22;UBERON:0003894,1.48e-25,22;UBERON:0004161,1.48e-25,22;UBERON:0008836,1.48e-25,22;UBERON:0005177,7.38e-25,79;UBERON:0009854,3.93e-24,23;UBERON:0009856,3.93e-24,23;UBERON:0002365,1.25e-21,25;UBERON:0002330,1.25e-21,25;UBERON:0002100,3.68e-20,90;UBERON:0003104,1.30e-19,61;UBERON:0009142,1.30e-19,61;UBERON:0009569,2.67e-17,66;UBERON:0002113,1.15e-13,14;UBERON:0003918,1.15e-13,14;UBERON:0011143,1.15e-13,14;UBERON:0005095,1.15e-13,14;UBERON:0007687,1.15e-13,14;UBERON:0005256,1.45e-13,45;UBERON:0003914,1.28e-11,47;UBERON:0000949,1.57e-11,72;UBERON:0006554,7.94e-10,18;UBERON:0001008,3.99e-09,19;UBERON:0001264,4.51e-09,12;UBERON:0001041,4.88e-08,80;UBERON:0000489,6.23e-08,21|phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.319984845586813,0.22940928106717,0,0,0,0.190023419456374,0,0.665191531965914,0,0,0,0.866554859253824,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02905142091174,5.16254326188832,6.79971333707751,9.17495425784289,7.14754059192436,7.16843019355737,3.08977724289854,0,0,0,0,0,0,0,0,0,0,3.76806803072898,0,0.148442139064825,0.346970653532272,0,1.38369298353635,0.301445281105245,0,0.125666591329675,2.96633961281249,0,0,0,0,0,0,0,0.209446706813455,0.510914110417183,0,0,0,0,0,0,0,0,0,0,1.01839363850316,3.73220911830279,13.6470289554184,0,0,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,1.19420560091096,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0.134206418760372,0,0.205809224758569,0.330418782983798,0.528901133327089,1.70630600428187,1.62565670302307,0.77320476793256,1.61346819698674,1.11189021922435,1.14135375667535,0,1.15289268306808,0.251335208800269,1.39269530428806,0.58489226135736,0,0.432276099749388,0.199141273254367,2.27601481143698,3.08470984046268,5.63538678365402,5.29493452397817,3.29719228184964,5.26018649177389,7.33543830641385,5.90440591918409,3.767969468193,3.57851775373222,12.1545577105731,0.667380422864376,2.16214894624523,2.47348323623339,4.46292267054706,5.788251834058,5.60176873919124,5.17853047411459,4.21551589615092,10.4333337011471,7.18841032636773,11.9085103253921,12.1694692514679,8.84026072814891,9.86685774370517,9.16642690590398,0.184753190166605,0.189491411770485,0.488894929326078,0.509235257325564,0.469380496577004,0.335012514883631,0.238043640886014,0.195133647857799,0.315270288212382,0.44292937929755,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.712262414669021,0.162886959353576,0.164970122972535,1.32745138339963,5.34117399540959,7.25576536715402,5.46954731292105,4.72483028609236,0.614870295887855,0.516856586336442,5.45300594216258,6.77345018930971,2.21225730555071,1.054186085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| ||
|EntrezGene=93721 | |||
|HGNC= | |||
|MCL_coexpression_id=3197 | |||
|UniProt=Q9JJN5 | |||
|association_with_transcript=107bp_to_NM_030703,uc008hpa.1_5end | |||
|description=CAGE_peak_2_at_Cpn1_5end | |||
|id=chr19:44060891..44060902,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.81e-07,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005177!5.54e-20!85;UBERON:0005172!1.62e-18!49;UBERON:0005173!1.62e-18!49;UBERON:0002417!1.62e-18!49;UBERON:0000916!1.62e-18!49;UBERON:0009569!3.89e-17!66;UBERON:0002107!5.15e-17!22;UBERON:0007499!5.15e-17!22;UBERON:0006925!5.15e-17!22;UBERON:0009497!5.15e-17!22;UBERON:0000015!5.15e-17!22;UBERON:0002423!5.15e-17!22;UBERON:0006235!5.15e-17!22;UBERON:0008835!5.15e-17!22;UBERON:0003894!5.15e-17!22;UBERON:0004161!5.15e-17!22;UBERON:0008836!5.15e-17!22;UBERON:0009854!8.65e-16!23;UBERON:0009856!8.65e-16!23;UBERON:0000466!2.64e-15!79;UBERON:0002100!5.20e-14!98;UBERON:0002365!1.18e-13!25;UBERON:0002330!1.18e-13!25;UBERON:0001007!2.81e-13!128;UBERON:0001555!2.81e-13!128;UBERON:0007026!2.81e-13!128;UBERON:0004119!3.75e-13!130;UBERON:0000925!3.75e-13!130;UBERON:0006595!3.75e-13!130;UBERON:0004921!7.28e-13!126;UBERON:0004185!7.28e-13!126;UBERON:0003104!3.44e-11!131;UBERON:0009142!3.44e-11!131;UBERON:0005409!1.01e-10!59;UBERON:0001041!1.71e-10!92;UBERON:0000077!2.11e-09!97;UBERON:0002113!1.69e-08!14;UBERON:0003918!1.69e-08!14;UBERON:0005095!1.69e-08!14;UBERON:0007687!1.69e-08!14;UBERON:0000160!5.05e-08!43;UBERON:0001264!8.43e-08!12;UBERON:0003922!8.43e-08!12;UBERON:0002114!8.43e-08!12;UBERON:0003923!8.43e-08!12;UBERON:0003924!8.43e-08!12;UBERON:0003921!8.43e-08!12;UBERON:0005256!1.65e-07!47;UBERON:0002108!2.45e-07!16;UBERON:0003914!4.77e-07!47;UBERON:0001045!7.60e-07!13;UBERON:0006554!9.11e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,3.82e-27,49;UBERON:0005173,3.82e-27,49;UBERON:0002417,3.82e-27,49;UBERON:0000916,3.82e-27,49;UBERON:0002107,1.48e-25,22;UBERON:0007499,1.48e-25,22;UBERON:0006925,1.48e-25,22;UBERON:0009497,1.48e-25,22;UBERON:0000015,1.48e-25,22;UBERON:0002423,1.48e-25,22;UBERON:0006235,1.48e-25,22;UBERON:0008835,1.48e-25,22;UBERON:0003894,1.48e-25,22;UBERON:0004161,1.48e-25,22;UBERON:0008836,1.48e-25,22;UBERON:0005177,7.38e-25,79;UBERON:0009854,3.93e-24,23;UBERON:0009856,3.93e-24,23;UBERON:0002365,1.25e-21,25;UBERON:0002330,1.25e-21,25;UBERON:0002100,3.68e-20,90;UBERON:0003104,1.30e-19,61;UBERON:0009142,1.30e-19,61;UBERON:0009569,2.67e-17,66;UBERON:0002113,1.15e-13,14;UBERON:0003918,1.15e-13,14;UBERON:0011143,1.15e-13,14;UBERON:0005095,1.15e-13,14;UBERON:0007687,1.15e-13,14;UBERON:0005256,1.45e-13,45;UBERON:0003914,1.28e-11,47;UBERON:0000949,1.57e-11,72;UBERON:0006554,7.94e-10,18;UBERON:0001008,3.99e-09,19;UBERON:0001264,4.51e-09,12;UBERON:0001041,4.88e-08,80;UBERON:0000489,6.23e-08,21 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0.319984845586813,0.22940928106717,0,0,0,0.190023419456374,0,0.665191531965914,0,0,0,0.866554859253824,0.166234645358492,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02905142091174,5.16254326188832,6.79971333707751,9.17495425784289,7.14754059192436,7.16843019355737,3.08977724289854,0,0,0,0,0,0,0,0,0,0,3.76806803072898,0,0.148442139064825,0.346970653532272,0,1.38369298353635,0.301445281105245,0,0.125666591329675,2.96633961281249,0,0,0,0,0,0,0,0.209446706813455,0.510914110417183,0,0,0,0,0,0,0,0,0,0,1.01839363850316,3.73220911830279,13.6470289554184,0,0,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,1.19420560091096,0,0,0,0,0,0.180062061461015,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0.134206418760372,0,0.205809224758569,0.330418782983798,0.528901133327089,1.70630600428187,1.62565670302307,0.77320476793256,1.61346819698674,1.11189021922435,1.14135375667535,0,1.15289268306808,0.251335208800269,1.39269530428806,0.58489226135736,0,0.432276099749388,0.199141273254367,2.27601481143698,3.08470984046268,5.63538678365402,5.29493452397817,3.29719228184964,5.26018649177389,7.33543830641385,5.90440591918409,3.767969468193,3.57851775373222,12.1545577105731,0.667380422864376,2.16214894624523,2.47348323623339,4.46292267054706,5.788251834058,5.60176873919124,5.17853047411459,4.21551589615092,10.4333337011471,7.18841032636773,11.9085103253921,12.1694692514679,8.84026072814891,9.86685774370517,9.16642690590398,0.184753190166605,0.189491411770485,0.488894929326078,0.509235257325564,0.469380496577004,0.335012514883631,0.238043640886014,0.195133647857799,0.315270288212382,0.44292937929755,0.159454768657487,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.712262414669021,0.162886959353576,0.164970122972535,1.32745138339963,5.34117399540959,7.25576536715402,5.46954731292105,4.72483028609236,0.614870295887855,0.516856586336442,5.45300594216258,6.77345018930971,2.21225730555071,1.05418608574999,2.06271086496374,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0.582961673259701,0,0,0.206386867963223,0,0,0,0,0,0,0,1.90934123603023,1.73984796469624,3.45643094115643,4.96824567780286,3.97267762427491,3.49380101993884,3.64133735239016,9.17453358551229,7.0674104335688,0.518459893167171,0,0,0,0,0.194451188344048,0,0.506868376472335,0.117357238645754,0.2604087696879,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0.888986911206461,0.412070114477788,0.64183841918363,0.252697211763798,1.52087579934144,0.377252682772152,0.468207537349412,0.704276676453562,1.03383844120104,0.476293691283074,0.463537303779422,0.38581844092741,1.64834360321323,0.588795680537589,0,0.70990322463735,1.1921809497366,0.290692833264657,0.752875043322645,1.60767754994185,0.73171189149109,0.526139422875686,0.679020569229309,0,1.06771516311757,0.985044823755635,1.22769312950907,1.54936841185966,0.771626443924566,0,0.701794825336225,1.07435527024149,0,0.220591419119515,0.231867835620421 | |||
|short_description=p2@Cpn1 | |||
}} |
Revision as of 17:43, 13 September 2013
Short description: | p2@Cpn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cpn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3197 |
Association with transcript: | 107bp_to_NM_030703, uc008hpa.1_5end |
EntrezGene: | Cpn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.81e-07 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.