FFCP PHASE1:Mm9::chr10:51215823..51215844,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=67|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:51215823..51215844,+|id=chr10:51215823..51215844,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002476,1.84e-23,2;CL:0002194,2.95e-12,4;CL:0000766,2.95e-12,4;CL:0000234,2.95e-12,4;CL:0000576,2.95e-12,4;CL:0000235,2.95e-12,4;CL:0000864,2.95e-12,4;CL:0002009,2.95e-12,4;CL:0000040,2.95e-12,4;CL:0000559,2.95e-12,4;CL:0000355,1.53e-11,9;CL:0000473,2.13e-07,7;CL:0000557,2.13e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,4.64e-33,3;DOID:4045,4.64e-33,3;DOID:0050686,6.00e-17,6|ontology_enrichment_uberon=UBERON:0002204!5.62e-08!32;UBERON:0002371!1.37e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.53e-11,9;UBERON:0002036,1.53e-11,9;UBERON:0002385,1.53e-11,9;UBERON:0000486,1.53e-11,9;UBERON:0007503,1.53e-11,9;UBERON:0001015,1.53e-11,9;UBERON:0002329,1.53e-11,9;UBERON:0003082,1.53e-11,9;UBERON:0003059,1.53e-11,9;UBERON:0007282,1.53e-11,9;UBERON:0004290,1.53e-11,9;UBERON:0009618,1.53e-11,9;UBERON:0000383,1.87e-10,10;UBERON:0007524,1.46e-09,11;UBERON:0003077,1.46e-09,11;UBERON:0007285,1.46e-09,11;UBERON:0002204,7.67e-09,32|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.60384793810598,1.5626706890476,3.66466620781659,4.1176204162171,3.41522742479223,3.39857247121808,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573066879877513,0,0,0,0,0,0,0.449949858640699,0.988866362566974,0.7104801149461,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0.259786004602869,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0.304465478312141,0,0,0,0,0,0.144599356919912,0,0,0,0.484875253135222,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0.203651327845314,0,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0.241177159752417,0,0.575392274901621,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0.184753190166605,0,0,0,0,0,0.238043640886014,0,0.157635144106191,0.221464689648775,0.159454768657487,0,0.345369963731791,0.289298117163023,18.0949540727127,16.86107619838,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0.206386867963223,0,0,0,0,0.169978429993855,0.139951452323658,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25984164595559,0,0,0.120195449519969,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0.375364950902364,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0.238436189947321,0,0,0,0.182927972872773,0,0,0.561142271657738,0,0,0,0,0,0,0,0.214871054048298,0.191288332068843,0,0|short_description=p@chr10:51215823..51215844,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=67 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:51215823..51215844,+ | |||
|id=chr10:51215823..51215844,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002476,1.84e-23,2;CL:0002194,2.95e-12,4;CL:0000766,2.95e-12,4;CL:0000234,2.95e-12,4;CL:0000576,2.95e-12,4;CL:0000235,2.95e-12,4;CL:0000864,2.95e-12,4;CL:0002009,2.95e-12,4;CL:0000040,2.95e-12,4;CL:0000559,2.95e-12,4;CL:0000355,1.53e-11,9;CL:0000473,2.13e-07,7;CL:0000557,2.13e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,4.64e-33,3;DOID:4045,4.64e-33,3;DOID:0050686,6.00e-17,6 | |||
|ontology_enrichment_uberon=UBERON:0002204!5.62e-08!32;UBERON:0002371!1.37e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.53e-11,9;UBERON:0002036,1.53e-11,9;UBERON:0002385,1.53e-11,9;UBERON:0000486,1.53e-11,9;UBERON:0007503,1.53e-11,9;UBERON:0001015,1.53e-11,9;UBERON:0002329,1.53e-11,9;UBERON:0003082,1.53e-11,9;UBERON:0003059,1.53e-11,9;UBERON:0007282,1.53e-11,9;UBERON:0004290,1.53e-11,9;UBERON:0009618,1.53e-11,9;UBERON:0000383,1.87e-10,10;UBERON:0007524,1.46e-09,11;UBERON:0003077,1.46e-09,11;UBERON:0007285,1.46e-09,11;UBERON:0002204,7.67e-09,32 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.60384793810598,1.5626706890476,3.66466620781659,4.1176204162171,3.41522742479223,3.39857247121808,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573066879877513,0,0,0,0,0,0,0.449949858640699,0.988866362566974,0.7104801149461,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0.259786004602869,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0.304465478312141,0,0,0,0,0,0.144599356919912,0,0,0,0.484875253135222,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0,0,0,0.203651327845314,0,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0.241177159752417,0,0.575392274901621,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0.184753190166605,0,0,0,0,0,0.238043640886014,0,0.157635144106191,0.221464689648775,0.159454768657487,0,0.345369963731791,0.289298117163023,18.0949540727127,16.86107619838,0,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0.206386867963223,0,0,0,0,0.169978429993855,0.139951452323658,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25984164595559,0,0,0.120195449519969,0,0,0,0.100826185136841,0,0,0,0,0,0,0,0,0.375364950902364,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0.238436189947321,0,0,0,0.182927972872773,0,0,0.561142271657738,0,0,0,0,0,0,0,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p@chr10:51215823..51215844,+ | |||
}} |
Revision as of 16:51, 12 September 2013
Short description: | p@chr10:51215823..51215844, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:51215823..51215844, + |
Coexpression cluster: | MCL_coexpression_mm9:67 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow macrophage | 1.84e-23 | 2 |
monopoietic cell | 2.95e-12 | 4 |
myeloid leukocyte | 2.95e-12 | 4 |
phagocyte | 2.95e-12 | 4 |
monocyte | 2.95e-12 | 4 |
macrophage | 2.95e-12 | 4 |
tissue-resident macrophage | 2.95e-12 | 4 |
macrophage dendritic cell progenitor | 2.95e-12 | 4 |
monoblast | 2.95e-12 | 4 |
promonocyte | 2.95e-12 | 4 |
multi-potent skeletal muscle stem cell | 1.53e-11 | 9 |
defensive cell | 2.13e-07 | 7 |
granulocyte monocyte progenitor cell | 2.13e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.53e-11 | 9 |
striated muscle tissue | 1.53e-11 | 9 |
muscle tissue | 1.53e-11 | 9 |
multilaminar epithelium | 1.53e-11 | 9 |
epithelial vesicle | 1.53e-11 | 9 |
musculature | 1.53e-11 | 9 |
somite | 1.53e-11 | 9 |
myotome | 1.53e-11 | 9 |
presomitic mesoderm | 1.53e-11 | 9 |
presumptive segmental plate | 1.53e-11 | 9 |
dermomyotome | 1.53e-11 | 9 |
trunk paraxial mesoderm | 1.53e-11 | 9 |
musculature of body | 1.87e-10 | 10 |
dense mesenchyme tissue | 1.46e-09 | 11 |
paraxial mesoderm | 1.46e-09 | 11 |
presumptive paraxial mesoderm | 1.46e-09 | 11 |
musculoskeletal system | 7.67e-09 | 32 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 4.64e-33 | 3 |
muscle cancer | 4.64e-33 | 3 |
organ system cancer | 6.00e-17 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.