FFCP PHASE1:Mm9::chr5:125342224..125342232,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=215707|HGNC=|MCL_coexpression_id=0|UniProt=D6RJ58|association_with_transcript=22bp_to_ENSMUST00000135495_5end|description=CAGE_peak_12_at_Ccdc92_5end|id=chr5:125342224..125342232,-|ontology_enrichment_celltype=CL:0002614!3.02e-12!3|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002298!2.59e-23!6;UBERON:0002950!8.95e-16!4;UBERON:0001891!8.95e-16!4;UBERON:0009616!8.95e-16!4;UBERON:0002038!3.02e-12!3;UBERON:0002308!3.02e-12!3;UBERON:0009663!3.02e-12!3;UBERON:0009661!3.02e-12!3;UBERON:0006331!3.02e-12!3;UBERON:0000125!3.02e-12!3;UBERON:0002616!2.49e-09!49;UBERON:0001896!3.48e-09!2;UBERON:0005290!3.48e-09!2;UBERON:0010096!3.48e-09!2;UBERON:0000955!4.21e-09!50;UBERON:0006238!4.21e-09!50;UBERON:0001049!1.25e-08!52;UBERON:0005068!1.25e-08!52;UBERON:0006241!1.25e-08!52;UBERON:0007135!1.25e-08!52;UBERON:0003076!4.81e-08!12;UBERON:0003057!4.81e-08!12;UBERON:0001017!6.15e-08!73;UBERON:0005743!6.15e-08!73;UBERON:0002420!6.68e-08!8;UBERON:0007245!6.68e-08!8;UBERON:0010009!6.68e-08!8;UBERON:0010011!6.68e-08!8;UBERON:0000454!6.68e-08!8;UBERON:0000073!1.17e-07!75;UBERON:0001016!1.17e-07!75;UBERON:0000033!8.55e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0001896,4.89e-20,2;UBERON:0002298,4.89e-20,2;UBERON:0005290,4.89e-20,2;UBERON:0010096,4.89e-20,2;UBERON:0003076,7.30e-08,12;UBERON:0003057,7.30e-08,12;UBERON:0004733,2.54e-07,6;UBERON:0004732,2.54e-07,6;UBERON:0002028,2.54e-07,6;UBERON:0007277,2.54e-07,6;UBERON:0000473,4.59e-07,14|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,5.52781385981954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,1.14918604276669,0.921639199537461,0,0,0,2.51264699101243,0.56276261003168,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.748953197024114,0.457500602818626,0,0.173824320192276,0,0.83115217823824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88991061978026,1.40654023910644,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52308073819968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.0572610568411,0,0,0,0,0,0,0,0,5.07326653734613,14.4015003128933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p12@Ccdc92}} | ||
|EntrezGene=215707 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt=D6RJ58 | |||
|association_with_transcript=22bp_to_ENSMUST00000135495_5end | |||
|description=CAGE_peak_12_at_Ccdc92_5end | |||
|id=chr5:125342224..125342232,- | |||
|ontology_enrichment_celltype=CL:0002614!3.02e-12!3 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002298!2.59e-23!6;UBERON:0002950!8.95e-16!4;UBERON:0001891!8.95e-16!4;UBERON:0009616!8.95e-16!4;UBERON:0002038!3.02e-12!3;UBERON:0002308!3.02e-12!3;UBERON:0009663!3.02e-12!3;UBERON:0009661!3.02e-12!3;UBERON:0006331!3.02e-12!3;UBERON:0000125!3.02e-12!3;UBERON:0002616!2.49e-09!49;UBERON:0001896!3.48e-09!2;UBERON:0005290!3.48e-09!2;UBERON:0010096!3.48e-09!2;UBERON:0000955!4.21e-09!50;UBERON:0006238!4.21e-09!50;UBERON:0001049!1.25e-08!52;UBERON:0005068!1.25e-08!52;UBERON:0006241!1.25e-08!52;UBERON:0007135!1.25e-08!52;UBERON:0003076!4.81e-08!12;UBERON:0003057!4.81e-08!12;UBERON:0001017!6.15e-08!73;UBERON:0005743!6.15e-08!73;UBERON:0002420!6.68e-08!8;UBERON:0007245!6.68e-08!8;UBERON:0010009!6.68e-08!8;UBERON:0010011!6.68e-08!8;UBERON:0000454!6.68e-08!8;UBERON:0000073!1.17e-07!75;UBERON:0001016!1.17e-07!75;UBERON:0000033!8.55e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,4.89e-20,2;UBERON:0002298,4.89e-20,2;UBERON:0005290,4.89e-20,2;UBERON:0010096,4.89e-20,2;UBERON:0003076,7.30e-08,12;UBERON:0003057,7.30e-08,12;UBERON:0004733,2.54e-07,6;UBERON:0004732,2.54e-07,6;UBERON:0002028,2.54e-07,6;UBERON:0007277,2.54e-07,6;UBERON:0000473,4.59e-07,14 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,5.52781385981954,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,1.14918604276669,0.921639199537461,0,0,0,2.51264699101243,0.56276261003168,0.30559649555362,0,0,0,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.68510327831436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0.748953197024114,0.457500602818626,0,0.173824320192276,0,0.83115217823824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88991061978026,1.40654023910644,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.52308073819968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.0572610568411,0,0,0,0,0,0,0,0,5.07326653734613,14.4015003128933,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p12@Ccdc92 | |||
}} |
Revision as of 06:28, 14 September 2013
Short description: | p12@Ccdc92 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Ccdc92_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 22bp_to_ENSMUST00000135495_5end |
EntrezGene: | Ccdc92 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 4.89e-20 | 2 |
brainstem | 4.89e-20 | 2 |
myelencephalon | 4.89e-20 | 2 |
future myelencephalon | 4.89e-20 | 2 |
posterior neural tube | 7.30e-08 | 12 |
chordal neural plate | 7.30e-08 | 12 |
segmental subdivision of hindbrain | 2.54e-07 | 6 |
segmental subdivision of nervous system | 2.54e-07 | 6 |
hindbrain | 2.54e-07 | 6 |
presumptive hindbrain | 2.54e-07 | 6 |
testis | 4.59e-07 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.